RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 TEX13AQ9BXU3 409 aaPredicted RBP19.02■□□□□ 0.64
FAM3A-218ENST00000475657 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
FAM3A-218ENST00000475657 COL11A2P13942 1736 aaPredicted RBP19.02■□□□□ 0.63
FAM3A-218ENST00000475657 CCDC85CA6NKD9 419 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 IL6STP40189 918 aaPredicted RBP19.01■□□□□ 0.63
FAM3A-218ENST00000475657 CCDC93Q567U6 631 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 CCDC24Q8N4L8 307 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 POLR3GLQ9BT43 218 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 SLX4Q8IY92 1834 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 ADAMTSL1Q8N6G6 1762 aa19.01■□□□□ 0.63
FAM3A-218ENST00000475657 ST5P78524 1137 aa19■□□□□ 0.63
FAM3A-218ENST00000475657 FKBP4Q02790 459 aaKnown RBP eCLIP19■□□□□ 0.63
FAM3A-218ENST00000475657 TBC1D2BQ9UPU7 963 aa19■□□□□ 0.63
FAM3A-218ENST00000475657 MAP1SQ66K74 1059 aaPredicted RBP18.99■□□□□ 0.63
FAM3A-218ENST00000475657 MORC1Q86VD1 984 aa18.99■□□□□ 0.63
FAM3A-218ENST00000475657 ABT1Q9ULW3 272 aaKnown RBP18.99■□□□□ 0.63
FAM3A-218ENST00000475657 ZNF541Q9H0D2 1346 aa18.99■□□□□ 0.63
FAM3A-218ENST00000475657 ECE1P42892 770 aa18.98■□□□□ 0.63
FAM3A-218ENST00000475657 TTC5Q8N0Z6 440 aa18.98■□□□□ 0.63
FAM3A-218ENST00000475657 BEGAINQ9BUH8 593 aa18.98■□□□□ 0.63
FAM3A-218ENST00000475657 FZD9O00144 591 aa18.97■□□□□ 0.63
FAM3A-218ENST00000475657 NPHP1O15259 732 aa18.97■□□□□ 0.63
FAM3A-218ENST00000475657 RTKN2Q8IZC4 609 aa18.97■□□□□ 0.63
FAM3A-218ENST00000475657 PANK3Q9H999 370 aa18.97■□□□□ 0.63
FAM3A-218ENST00000475657 DDX21Q9NR30 783 aaKnown RBP eCLIP18.97■□□□□ 0.63
FAM3A-218ENST00000475657 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 SCN7AQ01118 1682 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 KLRG2A4D1S0 409 aaPredicted RBP18.96■□□□□ 0.63
FAM3A-218ENST00000475657 CAMTA2O94983 1202 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 NPR1P16066 1061 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 GPC2Q8N158 579 aa18.96■□□□□ 0.63
FAM3A-218ENST00000475657 ZNF496Q96IT1 587 aaPredicted RBP18.96■□□□□ 0.63
FAM3A-218ENST00000475657 ZNF277Q9NRM2 450 aaPredicted RBP18.96■□□□□ 0.63
FAM3A-218ENST00000475657 HEG1Q9ULI3 1381 aa18.95■□□□□ 0.62
FAM3A-218ENST00000475657 MTHFSDQ2M296 383 aaKnown RBP18.95■□□□□ 0.62
FAM3A-218ENST00000475657 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
FAM3A-218ENST00000475657 CAPNS2Q96L46 248 aa18.95■□□□□ 0.62
FAM3A-218ENST00000475657 RNF123Q5XPI4 1314 aa18.95■□□□□ 0.62
FAM3A-218ENST00000475657 THSD7BQ9C0I4 1608 aa18.94■□□□□ 0.62
FAM3A-218ENST00000475657 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
FAM3A-218ENST00000475657 MAP2K2P36507 400 aa18.93■□□□□ 0.62
FAM3A-218ENST00000475657 IARSP41252 1262 aaKnown RBP18.93■□□□□ 0.62
FAM3A-218ENST00000475657 ZNF790Q6PG37 636 aa18.93■□□□□ 0.62
FAM3A-218ENST00000475657 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
FAM3A-218ENST00000475657 ZNF330Q9Y3S2 320 aaPredicted RBP18.93■□□□□ 0.62
FAM3A-218ENST00000475657 PDE4DIPQ5VU43 2346 aa18.92■□□□□ 0.62
FAM3A-218ENST00000475657 CA12O43570 354 aa18.92■□□□□ 0.62
FAM3A-218ENST00000475657 NBPF5PQ86XG9 351 aaPredicted RBP18.91■□□□□ 0.62
FAM3A-218ENST00000475657 RGL2O15211 777 aa18.9■□□□□ 0.62
FAM3A-218ENST00000475657 A1BGP04217 495 aa18.9■□□□□ 0.62
FAM3A-218ENST00000475657 HMOX1P09601 288 aa18.9■□□□□ 0.62
FAM3A-218ENST00000475657 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
FAM3A-218ENST00000475657 SYNE4Q8N205 404 aa18.9■□□□□ 0.62
FAM3A-218ENST00000475657 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
FAM3A-218ENST00000475657 ALDH1B1P30837 517 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 TEFQ10587 303 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 CYP4F22Q6NT55 531 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 TPTE2Q6XPS3 522 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 JDP2Q8WYK2 163 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 FMNL2Q96PY5 1086 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 PSMD1Q99460 953 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 TLL2Q9Y6L7 1015 aa18.89■□□□□ 0.61
FAM3A-218ENST00000475657 CST9Q5W186 159 aa18.88■□□□□ 0.61
FAM3A-218ENST00000475657 MCOLN1Q9GZU1 580 aa18.88■□□□□ 0.61
FAM3A-218ENST00000475657 ZNF652Q9Y2D9 606 aa18.88■□□□□ 0.61
FAM3A-218ENST00000475657 CACNA1SQ13698 1873 aa18.88■□□□□ 0.61
FAM3A-218ENST00000475657 LMOD1P29536 600 aaPredicted RBP18.87■□□□□ 0.61
FAM3A-218ENST00000475657 EIF6P56537 245 aaKnown RBP18.87■□□□□ 0.61
FAM3A-218ENST00000475657 OLFM4Q6UX06 510 aa18.87■□□□□ 0.61
FAM3A-218ENST00000475657 PAXIP1Q6ZW49 1069 aaPredicted RBP18.87■□□□□ 0.61
FAM3A-218ENST00000475657 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
FAM3A-218ENST00000475657 SNED1Q8TER0 1413 aa18.86■□□□□ 0.61
FAM3A-218ENST00000475657 CC2D2BQ6DHV5 1058 aa18.86■□□□□ 0.61
FAM3A-218ENST00000475657 USP50Q70EL3 339 aaPredicted RBP18.86■□□□□ 0.61
FAM3A-218ENST00000475657 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
FAM3A-218ENST00000475657 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
FAM3A-218ENST00000475657 SCNN1DP51172 638 aa18.85■□□□□ 0.61
FAM3A-218ENST00000475657 HHIPL1Q96JK4 782 aa18.85■□□□□ 0.61
FAM3A-218ENST00000475657 KNSTRNQ9Y448 316 aa18.85■□□□□ 0.61
FAM3A-218ENST00000475657 GNAT3A8MTJ3 354 aa18.84■□□□□ 0.61
FAM3A-218ENST00000475657 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
FAM3A-218ENST00000475657 GRIPAP1Q4V328 841 aa18.84■□□□□ 0.61
FAM3A-218ENST00000475657 EPS15P42566 896 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 BRPF1P55201 1214 aaPredicted RBP18.83■□□□□ 0.6
FAM3A-218ENST00000475657 GRM1Q13255 1194 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 SAPCD2Q86UD0 394 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 CFAP44Q96MT7 982 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 BCORQ6W2J9 1755 aa18.83■□□□□ 0.6
FAM3A-218ENST00000475657 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
FAM3A-218ENST00000475657 AOC2O75106 756 aa18.82■□□□□ 0.6
FAM3A-218ENST00000475657 GAS2L2Q8NHY3 880 aa18.82■□□□□ 0.6
FAM3A-218ENST00000475657 TNRC18O15417 2968 aaPredicted RBP18.81■□□□□ 0.6
FAM3A-218ENST00000475657 LTBP1Q14766 1721 aa18.81■□□□□ 0.6
FAM3A-218ENST00000475657 TRAF5O00463 557 aa18.81■□□□□ 0.6
FAM3A-218ENST00000475657 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
FAM3A-218ENST00000475657 CRY2Q49AN0 593 aa18.81■□□□□ 0.6
FAM3A-218ENST00000475657 AMER1Q5JTC6 1135 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms