RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SYTL4Q96C24 671 aaPredicted RBP13.41□□□□□ -0.26
U2AF1-209ENST00000475639 CRACR2AQ9BSW2 395 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 SLC3A2P08195 630 aaKnown RBP13.41□□□□□ -0.26
U2AF1-209ENST00000475639 PLEKHF1Q96S99 279 aa13.41□□□□□ -0.26
U2AF1-209ENST00000475639 FSD1Q9BTV5 496 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 BMP2KQ9NSY1 1161 aaPredicted RBP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 V9GYY5 206 aaPredicted RBP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 MAGI1Q96QZ7 1491 aaPredicted RBP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 TAF4BQ92750 862 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 KIF1BPQ96EK5 621 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 PTPRTO14522 1441 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 SAMD9LQ8IVG5 1584 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 MAP2K1Q02750 393 aaPredicted RBP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 INTS4Q96HW7 963 aaKnown RBP13.4□□□□□ -0.26
U2AF1-209ENST00000475639 TANGO6Q9C0B7 1094 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 CNPY2Q9Y2B0 182 aa13.4□□□□□ -0.26
U2AF1-209ENST00000475639 CNTROBQ8N137 903 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 ZNF446Q9NWS9 450 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 PIK3R4Q99570 1358 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 IL16Q14005 1332 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 CBFA2T2O43439 604 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 ZHX3Q9H4I2 956 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 ZNF215Q9UL58 517 aaPredicted RBP13.39□□□□□ -0.27
U2AF1-209ENST00000475639 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
U2AF1-209ENST00000475639 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 SRCIN1Q9C0H9 1055 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 RPAP1Q9BWH6 1393 aaPredicted RBP13.39□□□□□ -0.27
U2AF1-209ENST00000475639 GNAI1P63096 354 aa13.39□□□□□ -0.27
U2AF1-209ENST00000475639 FAM177A1Q8N128 213 aaPredicted RBP13.39□□□□□ -0.27
U2AF1-209ENST00000475639 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 TRIM22Q8IYM9 498 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 SLC12A5Q9H2X9 1139 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 KNDC1Q76NI1 1749 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 SHTN1A0MZ66 631 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 UBTFL1P0CB47 393 aaPredicted RBP13.38□□□□□ -0.27
U2AF1-209ENST00000475639 NRBP1Q9UHY1 535 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 MAST1Q9Y2H9 1570 aa13.38□□□□□ -0.27
U2AF1-209ENST00000475639 HIP1O00291 1037 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 NFATC2IPQ8NCF5 419 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 EFCC1Q9HA90 598 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 ATAD2Q6PL18 1390 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 UBE2HP62256 183 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 ARHGAP29Q52LW3 1261 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 DCTPP1Q9H773 170 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 WDR33Q9C0J8 1336 aaKnown RBP13.37□□□□□ -0.27
U2AF1-209ENST00000475639 ELF2Q15723 593 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 CEP63Q96MT8 703 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 SPATA24Q86W54 205 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.37□□□□□ -0.27
U2AF1-209ENST00000475639 RSPH14Q9UHP6 348 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 ERBB3P21860 1342 aa13.37□□□□□ -0.27
U2AF1-209ENST00000475639 PTCH1Q13635 1447 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 YY1AP1Q9H869 796 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 GNAI3P08754 354 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 KRT85P78386 507 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 ZSCAN25Q6NSZ9 544 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 PALD1Q9ULE6 856 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 ME1P48163 572 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 SMC1AQ14683 1233 aaKnown RBP13.36□□□□□ -0.27
U2AF1-209ENST00000475639 CEP135Q66GS9 1140 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 RAPGEF4Q8WZA2 1011 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 TNMDQ9H2S6 317 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 EVC2Q86UK5 1308 aa13.36□□□□□ -0.27
U2AF1-209ENST00000475639 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 ABCC4O15439 1325 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 NOP2P46087 812 aaKnown RBP13.35□□□□□ -0.27
U2AF1-209ENST00000475639 IMMTQ16891 758 aaKnown RBP13.35□□□□□ -0.27
U2AF1-209ENST00000475639 CFAP45Q9UL16 551 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 MYOM2P54296 1465 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 KIF2AO00139 706 aaPredicted RBP13.35□□□□□ -0.27
U2AF1-209ENST00000475639 EPB41L2O43491 1005 aaKnown RBP13.35□□□□□ -0.27
U2AF1-209ENST00000475639 CEP57L1Q8IYX8 460 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
U2AF1-209ENST00000475639 GTF3C6Q969F1 213 aa13.35□□□□□ -0.27
U2AF1-209ENST00000475639 SURF6O75683 361 aaKnown RBP13.34□□□□□ -0.27
U2AF1-209ENST00000475639 SLFNL1Q499Z3 407 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 FILIP1Q7Z7B0 1213 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 GEMIN8Q9NWZ8 242 aaKnown RBP13.34□□□□□ -0.27
U2AF1-209ENST00000475639 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 TRAPPC8Q9Y2L5 1435 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 POTEJP0CG39 1038 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 ANAPC15P60006 121 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 CDC42BPBQ9Y5S2 1711 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 CEBPZQ03701 1054 aaKnown RBP13.34□□□□□ -0.27
U2AF1-209ENST00000475639 GRIPAP1Q4V328 841 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 FAM107BQ9H098 131 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 SEPT11Q9NVA2 429 aaKnown RBP13.34□□□□□ -0.27
U2AF1-209ENST00000475639 ABCA8O94911 1581 aa13.34□□□□□ -0.27
U2AF1-209ENST00000475639 SOGA3Q5TF21 947 aa13.33□□□□□ -0.27
U2AF1-209ENST00000475639 NUTM2DQ5VT03 806 aaPredicted RBP13.33□□□□□ -0.28
U2AF1-209ENST00000475639 LUZP1Q86V48 1076 aa13.33□□□□□ -0.28
U2AF1-209ENST00000475639 NEK11Q8NG66 645 aa13.33□□□□□ -0.28
U2AF1-209ENST00000475639 FHOD1Q9Y613 1164 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms