RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 JMYQ8N9B5 988 aa16.61■□□□□ 0.25
CCDC57-208ENST00000475635 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
CCDC57-208ENST00000475635 PRAMEF22A3QJZ6 481 aa16.6■□□□□ 0.25
CCDC57-208ENST00000475635 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
CCDC57-208ENST00000475635 ST5P78524 1137 aa16.6■□□□□ 0.25
CCDC57-208ENST00000475635 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
CCDC57-208ENST00000475635 MCM10Q7L590 875 aa16.6■□□□□ 0.25
CCDC57-208ENST00000475635 NUP98P52948 1817 aa16.6■□□□□ 0.25
CCDC57-208ENST00000475635 ERFEQ4G0M1 354 aa16.59■□□□□ 0.25
CCDC57-208ENST00000475635 DPY19L2Q6NUT2 758 aa16.59■□□□□ 0.25
CCDC57-208ENST00000475635 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
CCDC57-208ENST00000475635 CNKSR1Q969H4 720 aa16.59■□□□□ 0.25
CCDC57-208ENST00000475635 TAOK3Q9H2K8 898 aa16.59■□□□□ 0.25
CCDC57-208ENST00000475635 POTECB2RU33 542 aa16.58■□□□□ 0.24
CCDC57-208ENST00000475635 SNRPA1P09661 255 aaKnown RBP16.58■□□□□ 0.24
CCDC57-208ENST00000475635 SRGNP10124 158 aa16.58■□□□□ 0.24
CCDC57-208ENST00000475635 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
CCDC57-208ENST00000475635 STYK1Q6J9G0 422 aa16.58■□□□□ 0.24
CCDC57-208ENST00000475635 SCN4AP35499 1836 aa16.57■□□□□ 0.24
CCDC57-208ENST00000475635 KDM3BQ7LBC6 1761 aa16.57■□□□□ 0.24
CCDC57-208ENST00000475635 LTBP3Q9NS15 1303 aa16.57■□□□□ 0.24
CCDC57-208ENST00000475635 PRPF40BQ6NWY9 871 aaKnown RBP16.57■□□□□ 0.24
CCDC57-208ENST00000475635 MASTLQ96GX5 879 aa16.57■□□□□ 0.24
CCDC57-208ENST00000475635 DCTN1Q14203 1278 aa16.56■□□□□ 0.24
CCDC57-208ENST00000475635 CLEC4GQ6UXB4 293 aa16.56■□□□□ 0.24
CCDC57-208ENST00000475635 NBPF5PQ86XG9 351 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-208ENST00000475635 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
CCDC57-208ENST00000475635 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
CCDC57-208ENST00000475635 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
CCDC57-208ENST00000475635 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
CCDC57-208ENST00000475635 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
CCDC57-208ENST00000475635 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
CCDC57-208ENST00000475635 DDNO94850 711 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-208ENST00000475635 COL13A1Q5TAT6 717 aaPredicted RBP16.52■□□□□ 0.24
CCDC57-208ENST00000475635 TPTE2Q6XPS3 522 aa16.52■□□□□ 0.24
CCDC57-208ENST00000475635 NIP7Q9Y221 180 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC57-208ENST00000475635 RGL2O15211 777 aa16.51■□□□□ 0.23
CCDC57-208ENST00000475635 NPR1P16066 1061 aa16.51■□□□□ 0.23
CCDC57-208ENST00000475635 TAF7Q15545 349 aaPredicted RBP16.51■□□□□ 0.23
CCDC57-208ENST00000475635 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
CCDC57-208ENST00000475635 FAM177BA6PVY3 158 aa16.5■□□□□ 0.23
CCDC57-208ENST00000475635 CCDC93Q567U6 631 aa16.5■□□□□ 0.23
CCDC57-208ENST00000475635 MIS18AQ9NYP9 233 aa16.5■□□□□ 0.23
CCDC57-208ENST00000475635 KLRG2A4D1S0 409 aaPredicted RBP16.49■□□□□ 0.23
CCDC57-208ENST00000475635 HLFQ16534 295 aa16.49■□□□□ 0.23
CCDC57-208ENST00000475635 CHADLQ6NUI6 762 aa16.49■□□□□ 0.23
CCDC57-208ENST00000475635 NEFMP07197 916 aa16.48■□□□□ 0.23
CCDC57-208ENST00000475635 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
CCDC57-208ENST00000475635 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
CCDC57-208ENST00000475635 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
CCDC57-208ENST00000475635 IQCA1LA6NCM1 817 aa16.47■□□□□ 0.23
CCDC57-208ENST00000475635 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
CCDC57-208ENST00000475635 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
CCDC57-208ENST00000475635 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-208ENST00000475635 OLFM4Q6UX06 510 aa16.47■□□□□ 0.23
CCDC57-208ENST00000475635 NGEFQ8N5V2 710 aa16.47■□□□□ 0.23
CCDC57-208ENST00000475635 ZNF277Q9NRM2 450 aaPredicted RBP16.47■□□□□ 0.23
CCDC57-208ENST00000475635 RTKN2Q8IZC4 609 aa16.46■□□□□ 0.23
CCDC57-208ENST00000475635 PNISRQ8TF01 805 aaKnown RBP16.46■□□□□ 0.23
CCDC57-208ENST00000475635 L3MBTL3Q96JM7 780 aaPredicted RBP16.46■□□□□ 0.23
CCDC57-208ENST00000475635 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
CCDC57-208ENST00000475635 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
CCDC57-208ENST00000475635 ALDH1B1P30837 517 aa16.45■□□□□ 0.22
CCDC57-208ENST00000475635 TAF1DQ9H5J8 278 aaPredicted RBP16.45■□□□□ 0.22
CCDC57-208ENST00000475635 ABCC12Q96J65 1359 aa16.45■□□□□ 0.22
CCDC57-208ENST00000475635 ADAMTSL1Q8N6G6 1762 aa16.45■□□□□ 0.22
CCDC57-208ENST00000475635 LDHDQ86WU2 507 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 NUTM1Q86Y26 1132 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 TNS4Q8IZW8 715 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 PLEKHF1Q96S99 279 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 NYXQ9GZU5 481 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
CCDC57-208ENST00000475635 ERVV-1B6SEH8 477 aa16.43■□□□□ 0.22
CCDC57-208ENST00000475635 IARSP41252 1262 aaKnown RBP16.43■□□□□ 0.22
CCDC57-208ENST00000475635 EIF4A1P60842 406 aaKnown RBP16.43■□□□□ 0.22
CCDC57-208ENST00000475635 KIF6Q6ZMV9 814 aa16.43■□□□□ 0.22
CCDC57-208ENST00000475635 THUMPD2Q9BTF0 503 aaKnown RBP16.43■□□□□ 0.22
CCDC57-208ENST00000475635 MKRN1Q9UHC7 482 aaKnown RBP16.43■□□□□ 0.22
CCDC57-208ENST00000475635 RRP7AQ9Y3A4 280 aaKnown RBP16.43■□□□□ 0.22
CCDC57-208ENST00000475635 ANKRD36CQ5JPF3 1778 aa16.43■□□□□ 0.22
CCDC57-208ENST00000475635 MYL6BP14649 208 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 NFE2L2Q16236 605 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 TTLL7Q6ZT98 887 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 SYNE4Q8N205 404 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 SNED1Q8TER0 1413 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 PASKQ96RG2 1323 aa16.42■□□□□ 0.22
CCDC57-208ENST00000475635 LAMB2P55268 1798 aa16.41■□□□□ 0.22
CCDC57-208ENST00000475635 CAPN15O75808 1086 aa16.41■□□□□ 0.22
CCDC57-208ENST00000475635 EAPPQ56P03 285 aaPredicted RBP16.41■□□□□ 0.22
CCDC57-208ENST00000475635 HACL1Q9UJ83 578 aa16.41■□□□□ 0.22
CCDC57-208ENST00000475635 IBTKQ9P2D0 1353 aaPredicted RBP16.4■□□□□ 0.22
CCDC57-208ENST00000475635 TRPM7Q96QT4 1865 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 FZD9O00144 591 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 GPTP24298 496 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 PSMD1Q99460 953 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 ZBTB3Q9H5J0 574 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 UBN2Q6ZU65 1347 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
CCDC57-208ENST00000475635 RIC1Q4ADV7 1423 aa16.39■□□□□ 0.21
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