RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 CPSF1Q10570 1443 aaKnown RBP6.74□□□□□ -1.33
CBWD1-212ENST00000475411 MAST3O60307 1309 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 BAG3O95817 575 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 FLIIQ13045 1269 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 IQSEC2Q5JU85 1478 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 TECPR2O15040 1411 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 GOLGA6L4A6NEF3 574 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 TULP1O00294 542 aaPredicted RBP6.74□□□□□ -1.33
CBWD1-212ENST00000475411 HLA-DOAP06340 250 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 ARHGAP27Q6ZUM4 889 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 HSCBQ8IWL3 235 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 LARGE2Q8N3Y3 721 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 SRGAP3O43295 1099 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 REC8O95072 547 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 UQCRFS1P1P0C7P4 283 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 GRIPAP1Q4V328 841 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 LDHAL6AQ6ZMR3 332 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 MAP3K2Q9Y2U5 619 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 MED14O60244 1454 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 LRRIQ1Q96JM4 1722 aa6.74□□□□□ -1.33
CBWD1-212ENST00000475411 COPS6Q7L5N1 327 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 C2CD5Q86YS7 1000 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 RPAP2Q8IXW5 612 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 DNAJC2Q99543 621 aaKnown RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 THUMPD2Q9BTF0 503 aaKnown RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 NRXN1Q9ULB1 1477 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 MAP3K12Q12852 859 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 KSR2Q6VAB6 950 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 DNAJC10Q8IXB1 793 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 CCDC85AQ96PX6 553 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 PALLDQ8WX93 1383 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 MST1RQ04912 1400 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 IL13P35225 146 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 RRP1P56182 461 aaKnown RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 SAMD1Q6SPF0 538 aaPredicted RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 NFXL1Q6ZNB6 911 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 CCDC43Q96MW1 224 aaKnown RBP6.73□□□□□ -1.33
CBWD1-212ENST00000475411 USP31Q70CQ4 1352 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 TRIM29Q14134 588 aa6.73□□□□□ -1.33
CBWD1-212ENST00000475411 SPATA31A1Q5TZJ5 1347 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 SPATA31A5Q5VU36 1347 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 SPATA31A7Q8IWB4 1347 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 NCAPD2Q15021 1401 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 SSH2Q76I76 1423 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 LRRC7Q96NW7 1537 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 USP5P45974 858 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 TTF1Q15361 905 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 DPP8Q6V1X1 898 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 GCC1Q96CN9 775 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 SIL1Q9H173 461 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 ABCF2Q9UG63 623 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 H7C1D1 291 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 ARHGEF6Q15052 776 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 CENPQQ7L2Z9 268 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 ILDR1Q86SU0 546 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 PLBD2Q8NHP8 589 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 RASSF8Q8NHQ8 419 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 CABP5Q9NP86 173 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 NOB1Q9ULX3 412 aaKnown RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 CDK12Q9NYV4 1490 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 IRS4O14654 1257 aaPredicted RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 MSL1Q68DK7 614 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 UBE3BQ7Z3V4 1068 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 MPHOSPH6Q99547 160 aaKnown RBP6.72□□□□□ -1.33
CBWD1-212ENST00000475411 GJA3Q9Y6H8 435 aa6.72□□□□□ -1.33
CBWD1-212ENST00000475411 PLCG2P16885 1265 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 TXNRD1Q16881 649 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 DALRD3Q5D0E6 543 aaKnown RBP6.71□□□□□ -1.33
CBWD1-212ENST00000475411 LINS1Q8NG48 757 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 LRRCC1Q9C099 1032 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 GGA1Q9UJY5 639 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 ATF5Q9Y2D1 282 aaPredicted RBP6.71□□□□□ -1.33
CBWD1-212ENST00000475411 ADAMTSL3P82987 1691 aa6.71□□□□□ -1.33
CBWD1-212ENST00000475411 CPLX1O14810 134 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 XBP1P17861 261 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 IL6STP40189 918 aaPredicted RBP6.71□□□□□ -1.34
CBWD1-212ENST00000475411 CHPF2Q9P2E5 772 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 NSFL1CQ9UNZ2 370 aaKnown RBP6.71□□□□□ -1.34
CBWD1-212ENST00000475411 KIF1AQ12756 1690 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 VWDEQ8N2E2 1590 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 FANCIQ9NVI1 1328 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 POLR3DP05423 398 aaPredicted RBP6.71□□□□□ -1.34
CBWD1-212ENST00000475411 FBLN1P23142 703 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 EN1Q05925 392 aaPredicted RBP6.71□□□□□ -1.34
CBWD1-212ENST00000475411 CARD14Q9BXL6 1004 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 CTNNA3Q9UI47 895 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 ATP5J2-PTCD1G3V325 749 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 PDIA4P13667 645 aaKnown RBP6.71□□□□□ -1.34
CBWD1-212ENST00000475411 SSFA2P28290 1259 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 ATP2B2Q01814 1243 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 TCIRG1Q13488 830 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 KIF1BPQ96EK5 621 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 BRMS1Q9HCU9 246 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 MBIPQ9NS73 344 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 IGSF1Q8N6C5 1336 aa6.71□□□□□ -1.34
CBWD1-212ENST00000475411 AACSQ86V21 672 aa6.7□□□□□ -1.34
CBWD1-212ENST00000475411 CCDC191Q8NCU4 936 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms