RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 PIK3C2GO75747 1445 aa11.31□□□□□ -0.6
CDH23-211ENST00000475158 GIMAP6Q6P9H5 292 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 CHST3Q7LGC8 479 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 ZHX3Q9H4I2 956 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 DCTPP1Q9H773 170 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 ESYT1Q9BSJ8 1104 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 PATL2C9JE40 543 aaKnown RBP11.3□□□□□ -0.6
CDH23-211ENST00000475158 KLHL10Q6JEL2 608 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 NAPBQ9H115 298 aa11.3□□□□□ -0.6
CDH23-211ENST00000475158 CTDP1Q9Y5B0 961 aaPredicted RBP11.3□□□□□ -0.6
CDH23-211ENST00000475158 DNMT1P26358 1616 aaKnown RBP11.3□□□□□ -0.6
CDH23-211ENST00000475158 EIF4G3O43432 1585 aaKnown RBP11.29□□□□□ -0.6
CDH23-211ENST00000475158 DYNC1I1O14576 645 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 IGHMBP2P38935 993 aaKnown RBP11.29□□□□□ -0.6
CDH23-211ENST00000475158 JMYQ8N9B5 988 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 ZNF830Q96NB3 372 aaPredicted RBP11.29□□□□□ -0.6
CDH23-211ENST00000475158 NPATQ14207 1427 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
CDH23-211ENST00000475158 DHX8Q14562 1220 aaKnown RBP11.29□□□□□ -0.6
CDH23-211ENST00000475158 MICU3Q86XE3 530 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 EVI5LQ96CN4 794 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 SPATA31E1Q6ZUB1 1445 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 OFD1O75665 1012 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 ATP8B2P98198 1209 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 ORAI2Q96SN7 254 aa11.29□□□□□ -0.6
CDH23-211ENST00000475158 GRM8O00222 908 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH23-211ENST00000475158 C8orf76Q96K31 380 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 LGR6Q9HBX8 967 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 RANBP6O60518 1105 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 GCP02774 474 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 RBM25P49756 843 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 SETQ01105 290 aaPredicted RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 SMAP1Q8IYB5 467 aaPredicted RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 CNPY2Q9Y2B0 182 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 RBM8AQ9Y5S9 174 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 GOLGA8BA8MQT2 603 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 SNRPA1P09661 255 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 NOM1Q5C9Z4 860 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 CEP57L1Q8IYX8 460 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 CCDC43Q96MW1 224 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 ZNF213O14771 459 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 IL13P35225 146 aa11.28□□□□□ -0.6
CDH23-211ENST00000475158 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
CDH23-211ENST00000475158 RBM5P52756 815 aaKnown RBP eCLIP11.27□□□□□ -0.6
CDH23-211ENST00000475158 CFAP100Q494V2 611 aa11.27□□□□□ -0.6
CDH23-211ENST00000475158 GPATCH11Q8N954 259 aa11.27□□□□□ -0.6
CDH23-211ENST00000475158 ACSBG1Q96GR2 724 aa11.27□□□□□ -0.6
CDH23-211ENST00000475158 KDM2BQ8NHM5 1336 aa11.27□□□□□ -0.61
CDH23-211ENST00000475158 HSP90AA4PQ58FG1 418 aa11.27□□□□□ -0.61
CDH23-211ENST00000475158 ZSCAN25Q6NSZ9 544 aa11.27□□□□□ -0.61
CDH23-211ENST00000475158 ZSCAN29Q8IWY8 852 aaPredicted RBP11.27□□□□□ -0.61
CDH23-211ENST00000475158 CWC25Q9NXE8 425 aaPredicted RBP11.27□□□□□ -0.61
CDH23-211ENST00000475158 TRMT1Q9NXH9 659 aaKnown RBP11.27□□□□□ -0.61
CDH23-211ENST00000475158 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 USP5P45974 858 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 CCDC183Q5T5S1 534 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 NEK1Q96PY6 1258 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 MSH6P52701 1360 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 SLC3A2P08195 630 aaKnown RBP11.26□□□□□ -0.61
CDH23-211ENST00000475158 ZSCAN23Q3MJ62 389 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 SCAND2PQ9GZW5 306 aaPredicted RBP11.26□□□□□ -0.61
CDH23-211ENST00000475158 SH2B1Q9NRF2 756 aaPredicted RBP11.26□□□□□ -0.61
CDH23-211ENST00000475158 ZNF219Q9P2Y4 722 aaPredicted RBP11.26□□□□□ -0.61
CDH23-211ENST00000475158 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
CDH23-211ENST00000475158 KLHL40Q2TBA0 621 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 CCDC112Q8NEF3 446 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 CDK5RAP3Q96JB5 506 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 AKAP2Q9Y2D5 859 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 USP16Q9Y5T5 823 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 ZMYM3Q14202 1370 aa11.26□□□□□ -0.61
CDH23-211ENST00000475158 EXOC5O00471 708 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 HOXC9P31274 260 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
CDH23-211ENST00000475158 FLT4P35916 1363 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 RNF123Q5XPI4 1314 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 NBPF7P0C2Y1 421 aaPredicted RBP11.25□□□□□ -0.61
CDH23-211ENST00000475158 TXLNAP40222 546 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 FAM173BQ6P4H8 233 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 FSIP1Q8NA03 581 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 PTPRTO14522 1441 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 ABCC1P33527 1531 aa11.25□□□□□ -0.61
CDH23-211ENST00000475158 EPS15P42566 896 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 ORC3Q9UBD5 711 aaPredicted RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 ANKRD18BA2A2Z9 1011 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 TIMM10P62072 90 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 NMIQ13287 307 aaPredicted RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 FILIP1LQ4L180 1135 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 C16orf45Q96MC5 204 aaPredicted RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 TMX1Q9H3N1 280 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 CWC15Q9P013 229 aaKnown RBP11.24□□□□□ -0.61
CDH23-211ENST00000475158 SHANK2Q9UPX8 1470 aa11.24□□□□□ -0.61
CDH23-211ENST00000475158 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms