RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 XAGE3Q8WTP9 111 aa20.26■□□□□ 0.83
COL1A1-204ENST00000474644 STK31Q9BXU1 1019 aa20.25■□□□□ 0.83
COL1A1-204ENST00000474644 MAP3K15Q6ZN16 1313 aa20.25■□□□□ 0.83
COL1A1-204ENST00000474644 POLD1P28340 1107 aa20.24■□□□□ 0.83
COL1A1-204ENST00000474644 AIMP1Q12904 312 aaKnown RBP20.24■□□□□ 0.83
COL1A1-204ENST00000474644 COPS6Q7L5N1 327 aa20.24■□□□□ 0.83
COL1A1-204ENST00000474644 RGL2O15211 777 aa20.23■□□□□ 0.83
COL1A1-204ENST00000474644 MMP10P09238 476 aa20.23■□□□□ 0.83
COL1A1-204ENST00000474644 YTHDC1Q96MU7 727 aaKnown RBP20.23■□□□□ 0.83
COL1A1-204ENST00000474644 ZBTB3Q9H5J0 574 aa20.23■□□□□ 0.83
COL1A1-204ENST00000474644 PHAXQ9H814 394 aaKnown RBP20.23■□□□□ 0.83
COL1A1-204ENST00000474644 ERVV-1B6SEH8 477 aa20.22■□□□□ 0.83
COL1A1-204ENST00000474644 HLFQ16534 295 aa20.22■□□□□ 0.83
COL1A1-204ENST00000474644 ZNF652Q9Y2D9 606 aa20.22■□□□□ 0.83
COL1A1-204ENST00000474644 SLC4A2P04920 1241 aa20.21■□□□□ 0.83
COL1A1-204ENST00000474644 CT47B1P0C2W7 299 aaPredicted RBP20.21■□□□□ 0.83
COL1A1-204ENST00000474644 DDR1Q08345 913 aa20.21■□□□□ 0.83
COL1A1-204ENST00000474644 NFIXQ14938 502 aa20.21■□□□□ 0.83
COL1A1-204ENST00000474644 TBC1D9BQ66K14 1250 aa20.21■□□□□ 0.83
COL1A1-204ENST00000474644 CLEC4GQ6UXB4 293 aa20.21■□□□□ 0.83
COL1A1-204ENST00000474644 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
COL1A1-204ENST00000474644 TM4SF1P30408 202 aa20.2■□□□□ 0.82
COL1A1-204ENST00000474644 BICDL1Q6ZP65 573 aa20.19■□□□□ 0.82
COL1A1-204ENST00000474644 G2E3Q7L622 706 aa20.19■□□□□ 0.82
COL1A1-204ENST00000474644 ZNF428Q96B54 188 aa20.19■□□□□ 0.82
COL1A1-204ENST00000474644 POLRMTO00411 1230 aaKnown RBP20.18■□□□□ 0.82
COL1A1-204ENST00000474644 GIGYF2Q6Y7W6 1299 aaKnown RBP20.18■□□□□ 0.82
COL1A1-204ENST00000474644 PLBD2Q8NHP8 589 aa20.18■□□□□ 0.82
COL1A1-204ENST00000474644 CARMIL3Q8ND23 1372 aa20.18■□□□□ 0.82
COL1A1-204ENST00000474644 ARFGEF2Q9Y6D5 1785 aa20.17■□□□□ 0.82
COL1A1-204ENST00000474644 FLIIQ13045 1269 aa20.17■□□□□ 0.82
COL1A1-204ENST00000474644 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
COL1A1-204ENST00000474644 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
COL1A1-204ENST00000474644 PPP1R1BQ9UD71 204 aaPredicted RBP20.17■□□□□ 0.82
COL1A1-204ENST00000474644 PARP3Q9Y6F1 533 aa20.17■□□□□ 0.82
COL1A1-204ENST00000474644 ALDH1L2Q3SY69 923 aa20.16■□□□□ 0.82
COL1A1-204ENST00000474644 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
COL1A1-204ENST00000474644 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
COL1A1-204ENST00000474644 NUP98P52948 1817 aa20.16■□□□□ 0.82
COL1A1-204ENST00000474644 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
COL1A1-204ENST00000474644 MRPL50Q8N5N7 158 aaKnown RBP20.15■□□□□ 0.82
COL1A1-204ENST00000474644 SETDB2Q96T68 719 aa20.15■□□□□ 0.82
COL1A1-204ENST00000474644 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
COL1A1-204ENST00000474644 ADCY9O60503 1353 aa20.15■□□□□ 0.82
COL1A1-204ENST00000474644 C10orf71Q711Q0 1435 aa20.15■□□□□ 0.82
COL1A1-204ENST00000474644 ANKRD36CQ5JPF3 1778 aa20.15■□□□□ 0.82
COL1A1-204ENST00000474644 UBN2Q6ZU65 1347 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 GPTP24298 496 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 HSP90AB3PQ58FF7 597 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 RIC3Q7Z5B4 369 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 ZNF34Q8IZ26 560 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 SMC4Q9NTJ3 1288 aa20.14■□□□□ 0.81
COL1A1-204ENST00000474644 SERPINB2P05120 415 aa20.13■□□□□ 0.81
COL1A1-204ENST00000474644 RARSP54136 660 aaKnown RBP20.13■□□□□ 0.81
COL1A1-204ENST00000474644 FKBP5Q13451 457 aaPredicted RBP20.13■□□□□ 0.81
COL1A1-204ENST00000474644 KSR2Q6VAB6 950 aa20.13■□□□□ 0.81
COL1A1-204ENST00000474644 CACNA1FO60840 1977 aa20.12■□□□□ 0.81
COL1A1-204ENST00000474644 PI4KAP2A4QPH2 592 aa20.12■□□□□ 0.81
COL1A1-204ENST00000474644 TCIRG1Q13488 830 aa20.12■□□□□ 0.81
COL1A1-204ENST00000474644 PI4KAP1Q8N8J0 262 aa20.12■□□□□ 0.81
COL1A1-204ENST00000474644 MAP3K2Q9Y2U5 619 aa20.12■□□□□ 0.81
COL1A1-204ENST00000474644 AFDNP55196 1824 aaKnown RBP20.11■□□□□ 0.81
COL1A1-204ENST00000474644 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-204ENST00000474644 FHDC1Q9C0D6 1143 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-204ENST00000474644 PARP10Q53GL7 1025 aa20.1■□□□□ 0.81
COL1A1-204ENST00000474644 PRR5LQ6MZQ0 368 aa20.1■□□□□ 0.81
COL1A1-204ENST00000474644 NBPF5PQ86XG9 351 aaPredicted RBP20.1■□□□□ 0.81
COL1A1-204ENST00000474644 KLHL34Q8N239 644 aa20.1■□□□□ 0.81
COL1A1-204ENST00000474644 FAM177BA6PVY3 158 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 NLRP10Q86W26 655 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 CNBD1Q8NA66 436 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 MYD88Q99836 296 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 ISCA1Q9BUE6 129 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 METTL22Q9BUU2 404 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-204ENST00000474644 KIF13BQ9NQT8 1826 aa20.09■□□□□ 0.81
COL1A1-204ENST00000474644 ATP5J2-PTCD1G3V325 749 aa20.08■□□□□ 0.81
COL1A1-204ENST00000474644 SUSD4Q5VX71 490 aa20.08■□□□□ 0.81
COL1A1-204ENST00000474644 CD2APQ9Y5K6 639 aa20.08■□□□□ 0.81
COL1A1-204ENST00000474644 PTPRCP08575 1304 aa20.07■□□□□ 0.8
COL1A1-204ENST00000474644 NTSR2O95665 410 aa20.07■□□□□ 0.8
COL1A1-204ENST00000474644 BRPF1P55201 1214 aaPredicted RBP20.07■□□□□ 0.8
COL1A1-204ENST00000474644 DNAAF4Q8WXU2 420 aa20.07■□□□□ 0.8
COL1A1-204ENST00000474644 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 F6X3S4 739 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 TRIM28Q13263 835 aaKnown RBP20.06■□□□□ 0.8
COL1A1-204ENST00000474644 TPTE2Q6XPS3 522 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 CCDC24Q8N4L8 307 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 SYT17Q9BSW7 474 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 NYXQ9GZU5 481 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 KIAA1551Q9HCM1 1747 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 ABCC12Q96J65 1359 aa20.06■□□□□ 0.8
COL1A1-204ENST00000474644 PXDNLA1KZ92 1463 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 NPHP1O15259 732 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 BCAR3O75815 825 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 ST5P78524 1137 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 NEXNQ0ZGT2 675 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 PPP1R42Q7Z4L9 355 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 NLGN2Q8NFZ4 835 aa20.05■□□□□ 0.8
COL1A1-204ENST00000474644 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms