RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 LMOD3Q0VAK6 560 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 KIF6Q6ZMV9 814 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 PLEKHF1Q96S99 279 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 THUMPD2Q9BTF0 503 aaKnown RBP19.85■□□□□ 0.77
VARS-223ENST00000474643 TSPYL4Q9UJ04 414 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 BCORQ6W2J9 1755 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 DLEC1Q9Y238 1755 aa19.85■□□□□ 0.77
VARS-223ENST00000474643 CNKSR1Q969H4 720 aa19.84■□□□□ 0.77
VARS-223ENST00000474643 RRP7AQ9Y3A4 280 aaKnown RBP19.84■□□□□ 0.77
VARS-223ENST00000474643 DLG5Q8TDM6 1919 aa19.84■□□□□ 0.77
VARS-223ENST00000474643 RIPK4P57078 832 aa19.83■□□□□ 0.77
VARS-223ENST00000474643 TPTE2Q6XPS3 522 aa19.83■□□□□ 0.77
VARS-223ENST00000474643 LAMB4A4D0S4 1761 aa19.83■□□□□ 0.76
VARS-223ENST00000474643 ZC3H4Q9UPT8 1303 aaKnown RBP19.82■□□□□ 0.76
VARS-223ENST00000474643 C21orf2O43822 256 aa19.82■□□□□ 0.76
VARS-223ENST00000474643 MYL6BP14649 208 aa19.82■□□□□ 0.76
VARS-223ENST00000474643 NBPF26B4DH59 902 aa19.81■□□□□ 0.76
VARS-223ENST00000474643 SOGA3Q5TF21 947 aa19.81■□□□□ 0.76
VARS-223ENST00000474643 STYK1Q6J9G0 422 aa19.81■□□□□ 0.76
VARS-223ENST00000474643 NBPF10Q6P3W6 841 aaKnown RBP19.81■□□□□ 0.76
VARS-223ENST00000474643 NBPF15Q8N660 670 aa19.81■□□□□ 0.76
VARS-223ENST00000474643 MASTLQ96GX5 879 aa19.81■□□□□ 0.76
VARS-223ENST00000474643 CEP350Q5VT06 3117 aa19.8■□□□□ 0.76
VARS-223ENST00000474643 EIF4A1P60842 406 aaKnown RBP19.8■□□□□ 0.76
VARS-223ENST00000474643 RRAGCQ9HB90 399 aa19.8■□□□□ 0.76
VARS-223ENST00000474643 ANKRD31Q8N7Z5 1873 aa19.79■□□□□ 0.76
VARS-223ENST00000474643 RGL2O15211 777 aa19.79■□□□□ 0.76
VARS-223ENST00000474643 NEUROD2Q15784 382 aa19.79■□□□□ 0.76
VARS-223ENST00000474643 PRPF40BQ6NWY9 871 aaKnown RBP19.79■□□□□ 0.76
VARS-223ENST00000474643 NYXQ9GZU5 481 aa19.79■□□□□ 0.76
VARS-223ENST00000474643 KDM3BQ7LBC6 1761 aa19.79■□□□□ 0.76
VARS-223ENST00000474643 NPR1P16066 1061 aa19.78■□□□□ 0.76
VARS-223ENST00000474643 APLP1P51693 650 aa19.78■□□□□ 0.76
VARS-223ENST00000474643 DPY19L2Q6NUT2 758 aa19.78■□□□□ 0.76
VARS-223ENST00000474643 CCDC146Q8IYE0 955 aa19.78■□□□□ 0.76
VARS-223ENST00000474643 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
VARS-223ENST00000474643 COL11A2P13942 1736 aaPredicted RBP19.78■□□□□ 0.76
VARS-223ENST00000474643 NFKBIEO00221 500 aa19.77■□□□□ 0.76
VARS-223ENST00000474643 SRGNP10124 158 aa19.77■□□□□ 0.76
VARS-223ENST00000474643 EIF2S2P20042 333 aaKnown RBP19.77■□□□□ 0.76
VARS-223ENST00000474643 HLFQ16534 295 aa19.77■□□□□ 0.76
VARS-223ENST00000474643 ERFEQ4G0M1 354 aa19.77■□□□□ 0.76
VARS-223ENST00000474643 RBM46Q8TBY0 533 aaKnown RBP19.77■□□□□ 0.76
VARS-223ENST00000474643 LAS1LQ9Y4W2 734 aaKnown RBP19.77■□□□□ 0.76
VARS-223ENST00000474643 SBF1O95248 1867 aa19.76■□□□□ 0.75
VARS-223ENST00000474643 TNRC6CQ9HCJ0 1690 aaKnown RBP19.76■□□□□ 0.75
VARS-223ENST00000474643 TMPOP42166 694 aaKnown RBP19.76■□□□□ 0.75
VARS-223ENST00000474643 ZBTB3Q9H5J0 574 aa19.76■□□□□ 0.75
VARS-223ENST00000474643 MAP3K15Q6ZN16 1313 aa19.76■□□□□ 0.75
VARS-223ENST00000474643 ERVV-1B6SEH8 477 aa19.75■□□□□ 0.75
VARS-223ENST00000474643 GPTP24298 496 aa19.75■□□□□ 0.75
VARS-223ENST00000474643 TIAM2Q8IVF5 1701 aa19.75■□□□□ 0.75
VARS-223ENST00000474643 CACNA1SQ13698 1873 aa19.75■□□□□ 0.75
VARS-223ENST00000474643 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
VARS-223ENST00000474643 GLTPD2A6NH11 291 aa19.74■□□□□ 0.75
VARS-223ENST00000474643 FSTL1Q12841 308 aa19.74■□□□□ 0.75
VARS-223ENST00000474643 CCDC93Q567U6 631 aa19.74■□□□□ 0.75
VARS-223ENST00000474643 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
VARS-223ENST00000474643 VEGFAP15692 232 aaPredicted RBP19.73■□□□□ 0.75
VARS-223ENST00000474643 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
VARS-223ENST00000474643 RPGRQ92834 1020 aaKnown RBP19.73■□□□□ 0.75
VARS-223ENST00000474643 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
VARS-223ENST00000474643 MRS2Q9HD23 443 aa19.73■□□□□ 0.75
VARS-223ENST00000474643 BABAM1Q9NWV8 329 aa19.73■□□□□ 0.75
VARS-223ENST00000474643 ALDH1B1P30837 517 aa19.72■□□□□ 0.75
VARS-223ENST00000474643 SMC1BQ8NDV3 1235 aa19.72■□□□□ 0.75
VARS-223ENST00000474643 NUTM1Q86Y26 1132 aa19.71■□□□□ 0.75
VARS-223ENST00000474643 NECTIN2Q92692 538 aa19.71■□□□□ 0.75
VARS-223ENST00000474643 LTBP3Q9NS15 1303 aa19.71■□□□□ 0.75
VARS-223ENST00000474643 PPP1R42Q7Z4L9 355 aa19.7■□□□□ 0.74
VARS-223ENST00000474643 TMX4Q9H1E5 349 aaPredicted RBP19.7■□□□□ 0.74
VARS-223ENST00000474643 CCDC88AQ3V6T2 1871 aa19.69■□□□□ 0.74
VARS-223ENST00000474643 PRELPP51888 382 aa19.69■□□□□ 0.74
VARS-223ENST00000474643 CCDC184Q52MB2 194 aa19.69■□□□□ 0.74
VARS-223ENST00000474643 SLX4Q8IY92 1834 aa19.69■□□□□ 0.74
VARS-223ENST00000474643 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
VARS-223ENST00000474643 RTKN2Q8IZC4 609 aa19.68■□□□□ 0.74
VARS-223ENST00000474643 ARFGEF2Q9Y6D5 1785 aa19.67■□□□□ 0.74
VARS-223ENST00000474643 FER1L6Q2WGJ9 1857 aa19.67■□□□□ 0.74
VARS-223ENST00000474643 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
VARS-223ENST00000474643 GIGYF2Q6Y7W6 1299 aaKnown RBP19.67■□□□□ 0.74
VARS-223ENST00000474643 KLRG2A4D1S0 409 aaPredicted RBP19.66■□□□□ 0.74
VARS-223ENST00000474643 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
VARS-223ENST00000474643 RBM17Q96I25 401 aaKnown RBP19.66■□□□□ 0.74
VARS-223ENST00000474643 ABCC12Q96J65 1359 aa19.66■□□□□ 0.74
VARS-223ENST00000474643 NUP98P52948 1817 aa19.65■□□□□ 0.74
VARS-223ENST00000474643 ANXA1P04083 346 aa19.65■□□□□ 0.74
VARS-223ENST00000474643 HSP90AB3PQ58FF7 597 aa19.65■□□□□ 0.74
VARS-223ENST00000474643 ZNF277Q9NRM2 450 aaPredicted RBP19.65■□□□□ 0.74
VARS-223ENST00000474643 UBN2Q6ZU65 1347 aa19.65■□□□□ 0.74
VARS-223ENST00000474643 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
VARS-223ENST00000474643 SUSD4Q5VX71 490 aa19.64■□□□□ 0.73
VARS-223ENST00000474643 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
VARS-223ENST00000474643 CALD1Q05682 793 aaKnown RBP19.63■□□□□ 0.73
VARS-223ENST00000474643 HDGFL1Q5TGJ6 251 aa19.63■□□□□ 0.73
VARS-223ENST00000474643 XAGE3Q8WTP9 111 aa19.63■□□□□ 0.73
VARS-223ENST00000474643 NLRP3Q96P20 1036 aa19.63■□□□□ 0.73
VARS-223ENST00000474643 IQCA1LA6NCM1 817 aa19.62■□□□□ 0.73
VARS-223ENST00000474643 TCERG1O14776 1098 aaKnown RBP19.62■□□□□ 0.73
VARS-223ENST00000474643 PROSER3Q2NL68 480 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms