RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 MASTLQ96GX5 879 aa18.07■□□□□ 0.48
RTN4R-206ENST00000474642 CACNA1SQ13698 1873 aa18.07■□□□□ 0.48
RTN4R-206ENST00000474642 CCDC85CA6NKD9 419 aa18.06■□□□□ 0.48
RTN4R-206ENST00000474642 SRGNP10124 158 aa18.06■□□□□ 0.48
RTN4R-206ENST00000474642 WDR33Q9C0J8 1336 aaKnown RBP18.05■□□□□ 0.48
RTN4R-206ENST00000474642 EPHX2P34913 555 aa18.05■□□□□ 0.48
RTN4R-206ENST00000474642 CNTROBQ8N137 903 aa18.05■□□□□ 0.48
RTN4R-206ENST00000474642 PCDH10Q9P2E7 1040 aa18.05■□□□□ 0.48
RTN4R-206ENST00000474642 ABT1Q9ULW3 272 aaKnown RBP18.05■□□□□ 0.48
RTN4R-206ENST00000474642 HMOX1P09601 288 aa18.04■□□□□ 0.48
RTN4R-206ENST00000474642 CCDC93Q567U6 631 aa18.04■□□□□ 0.48
RTN4R-206ENST00000474642 PNMA8AQ86V59 439 aaPredicted RBP18.04■□□□□ 0.48
RTN4R-206ENST00000474642 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
RTN4R-206ENST00000474642 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
RTN4R-206ENST00000474642 MAP1SQ66K74 1059 aaPredicted RBP18.03■□□□□ 0.48
RTN4R-206ENST00000474642 BEGAINQ9BUH8 593 aa18.03■□□□□ 0.48
RTN4R-206ENST00000474642 ZNF277Q9NRM2 450 aaPredicted RBP18.03■□□□□ 0.48
RTN4R-206ENST00000474642 IL6STP40189 918 aaPredicted RBP18.02■□□□□ 0.48
RTN4R-206ENST00000474642 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.48
RTN4R-206ENST00000474642 MTHFSDQ2M296 383 aaKnown RBP18.02■□□□□ 0.48
RTN4R-206ENST00000474642 SCN7AQ01118 1682 aa18.02■□□□□ 0.47
RTN4R-206ENST00000474642 PAXIP1Q6ZW49 1069 aaPredicted RBP18.01■□□□□ 0.47
RTN4R-206ENST00000474642 C7orf43Q8WVR3 580 aa18.01■□□□□ 0.47
RTN4R-206ENST00000474642 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
RTN4R-206ENST00000474642 UBR2Q8IWV8 1755 aa18.01■□□□□ 0.47
RTN4R-206ENST00000474642 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
RTN4R-206ENST00000474642 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
RTN4R-206ENST00000474642 CAMTA2O94983 1202 aa18■□□□□ 0.47
RTN4R-206ENST00000474642 TRIM26Q12899 539 aaPredicted RBP18■□□□□ 0.47
RTN4R-206ENST00000474642 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
RTN4R-206ENST00000474642 NPR1P16066 1061 aa17.99■□□□□ 0.47
RTN4R-206ENST00000474642 RGS19P49795 217 aa17.99■□□□□ 0.47
RTN4R-206ENST00000474642 NBPF5PQ86XG9 351 aaPredicted RBP17.99■□□□□ 0.47
RTN4R-206ENST00000474642 A1BGP04217 495 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 ECE1P42892 770 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 TEFQ10587 303 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 GRM1Q13255 1194 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 ZNF790Q6PG37 636 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 DZIP3Q86Y13 1208 aaKnown RBP17.98■□□□□ 0.47
RTN4R-206ENST00000474642 RTKN2Q8IZC4 609 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 DDX21Q9NR30 783 aaKnown RBP eCLIP17.98■□□□□ 0.47
RTN4R-206ENST00000474642 KNSTRNQ9Y448 316 aa17.98■□□□□ 0.47
RTN4R-206ENST00000474642 ADAMTSL1Q8N6G6 1762 aa17.97■□□□□ 0.47
RTN4R-206ENST00000474642 IARSP41252 1262 aaKnown RBP17.97■□□□□ 0.47
RTN4R-206ENST00000474642 CAPNS2Q96L46 248 aa17.97■□□□□ 0.47
RTN4R-206ENST00000474642 CFAP44Q96MT7 982 aa17.97■□□□□ 0.47
RTN4R-206ENST00000474642 FZD9O00144 591 aa17.96■□□□□ 0.47
RTN4R-206ENST00000474642 OLFM4Q6UX06 510 aa17.96■□□□□ 0.47
RTN4R-206ENST00000474642 GPC2Q8N158 579 aa17.96■□□□□ 0.47
RTN4R-206ENST00000474642 SYNE4Q8N205 404 aa17.96■□□□□ 0.47
RTN4R-206ENST00000474642 GPR101Q96P66 508 aaPredicted RBP17.96■□□□□ 0.47
RTN4R-206ENST00000474642 JDP2Q8WYK2 163 aa17.95■□□□□ 0.46
RTN4R-206ENST00000474642 FMNL2Q96PY5 1086 aa17.95■□□□□ 0.46
RTN4R-206ENST00000474642 LMOD1P29536 600 aaPredicted RBP17.94■□□□□ 0.46
RTN4R-206ENST00000474642 CYP4F22Q6NT55 531 aa17.94■□□□□ 0.46
RTN4R-206ENST00000474642 GJA3Q9Y6H8 435 aa17.94■□□□□ 0.46
RTN4R-206ENST00000474642 EIF6P56537 245 aaKnown RBP17.93■□□□□ 0.46
RTN4R-206ENST00000474642 CLEC4GQ6UXB4 293 aa17.93■□□□□ 0.46
RTN4R-206ENST00000474642 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
RTN4R-206ENST00000474642 TSKSQ9UJT2 592 aa17.93■□□□□ 0.46
RTN4R-206ENST00000474642 ZNF652Q9Y2D9 606 aa17.93■□□□□ 0.46
RTN4R-206ENST00000474642 KLRG2A4D1S0 409 aaPredicted RBP17.92■□□□□ 0.46
RTN4R-206ENST00000474642 GNAT3A8MTJ3 354 aa17.92■□□□□ 0.46
RTN4R-206ENST00000474642 DIAPH1O60610 1272 aaKnown RBP17.92■□□□□ 0.46
RTN4R-206ENST00000474642 ALDH1B1P30837 517 aa17.92■□□□□ 0.46
RTN4R-206ENST00000474642 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.46
RTN4R-206ENST00000474642 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
RTN4R-206ENST00000474642 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
RTN4R-206ENST00000474642 EIF4G2P78344 907 aaKnown RBP eCLIP17.91■□□□□ 0.46
RTN4R-206ENST00000474642 BCORQ6W2J9 1755 aa17.91■□□□□ 0.46
RTN4R-206ENST00000474642 PDE4DIPQ5VU43 2346 aa17.9■□□□□ 0.46
RTN4R-206ENST00000474642 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
RTN4R-206ENST00000474642 TIMELESSQ9UNS1 1208 aa17.9■□□□□ 0.46
RTN4R-206ENST00000474642 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
RTN4R-206ENST00000474642 HSPA5P11021 654 aaKnown RBP17.89■□□□□ 0.45
RTN4R-206ENST00000474642 MAP2K2P36507 400 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 EPS15P42566 896 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 GAS2L2Q8NHY3 880 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 PSMD1Q99460 953 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 MCOLN1Q9GZU1 580 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 TLL2Q9Y6L7 1015 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 THSD7BQ9C0I4 1608 aa17.89■□□□□ 0.45
RTN4R-206ENST00000474642 TRPM7Q96QT4 1865 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 CASP8AP2Q9UKL3 1982 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 BTBD11A6QL63 1104 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 TRAF5O00463 557 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 AOC2O75106 756 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
RTN4R-206ENST00000474642 CST9Q5W186 159 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
RTN4R-206ENST00000474642 KCNQ3O43525 872 aa17.87■□□□□ 0.45
RTN4R-206ENST00000474642 CA12O43570 354 aa17.87■□□□□ 0.45
RTN4R-206ENST00000474642 USP50Q70EL3 339 aaPredicted RBP17.87■□□□□ 0.45
RTN4R-206ENST00000474642 SCNN1DP51172 638 aa17.86■□□□□ 0.45
RTN4R-206ENST00000474642 AMER1Q5JTC6 1135 aaPredicted RBP17.86■□□□□ 0.45
RTN4R-206ENST00000474642 CC2D2BQ6DHV5 1058 aa17.86■□□□□ 0.45
RTN4R-206ENST00000474642 LARGE2Q8N3Y3 721 aa17.86■□□□□ 0.45
RTN4R-206ENST00000474642 U2SURPO15042 1029 aaKnown RBP17.85■□□□□ 0.45
RTN4R-206ENST00000474642 SIPA1L3O60292 1781 aaPredicted RBP17.85■□□□□ 0.45
RTN4R-206ENST00000474642 DGKZQ13574 1117 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms