RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 LGR6Q9HBX8 967 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 SPG7Q9UQ90 795 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 UBE2HP62256 183 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 MTX1Q13505 466 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 UVSSAQ2YD98 709 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 CNPY2Q9Y2B0 182 aa16.91■□□□□ 0.3
RPGR-206ENST00000474584 ADGRL3Q9HAR2 1447 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 PHRF1Q9P1Y6 1649 aaKnown RBP16.9■□□□□ 0.3
RPGR-206ENST00000474584 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 SYT1P21579 422 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 NBPF6Q5VWK0 638 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 NBPF4Q96M43 638 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
RPGR-206ENST00000474584 CHD2O14647 1828 aaKnown RBP16.9■□□□□ 0.3
RPGR-206ENST00000474584 F13A1P00488 732 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 ECHDC1Q9NTX5 307 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 PHF8Q9UPP1 1060 aa16.9■□□□□ 0.3
RPGR-206ENST00000474584 TRHP20396 242 aaPredicted RBP16.89■□□□□ 0.29
RPGR-206ENST00000474584 AKAP4Q5JQC9 854 aa16.89■□□□□ 0.29
RPGR-206ENST00000474584 PDCL3Q9H2J4 239 aa16.89■□□□□ 0.29
RPGR-206ENST00000474584 C9orf78Q9NZ63 289 aaPredicted RBP16.89■□□□□ 0.29
RPGR-206ENST00000474584 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
RPGR-206ENST00000474584 NCAPD2Q15021 1401 aa16.88■□□□□ 0.29
RPGR-206ENST00000474584 ALDH1L1O75891 902 aa16.88■□□□□ 0.29
RPGR-206ENST00000474584 ANXA1P04083 346 aa16.88■□□□□ 0.29
RPGR-206ENST00000474584 IFIT2P09913 472 aaKnown RBP16.88■□□□□ 0.29
RPGR-206ENST00000474584 VPS53Q5VIR6 699 aa16.88■□□□□ 0.29
RPGR-206ENST00000474584 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
RPGR-206ENST00000474584 HYPKQ9NX55 129 aa16.88■□□□□ 0.29
RPGR-206ENST00000474584 KCNQ3O43525 872 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 KIAA2012Q0VF49 1180 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
RPGR-206ENST00000474584 ZSCAN31Q96LW9 406 aaPredicted RBP16.87■□□□□ 0.29
RPGR-206ENST00000474584 JAKMIP1Q96N16 626 aaKnown RBP16.87■□□□□ 0.29
RPGR-206ENST00000474584 KLHL34Q8N239 644 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 KCNH5Q8NCM2 988 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 LARP6Q9BRS8 491 aaKnown RBP16.87■□□□□ 0.29
RPGR-206ENST00000474584 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 PDRG1Q9NUG6 133 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 CYP46A1Q9Y6A2 500 aa16.87■□□□□ 0.29
RPGR-206ENST00000474584 OVOS2A0A0G2JMS6 1433 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 FIBPO43427 364 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 EVI5LQ96CN4 794 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 MAP3K2Q9Y2U5 619 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 CPA1P15085 419 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 ZKSCAN1P17029 563 aaPredicted RBP16.86■□□□□ 0.29
RPGR-206ENST00000474584 GJB2P29033 226 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 AMOTQ4VCS5 1084 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 PRPF40BQ6NWY9 871 aaKnown RBP16.86■□□□□ 0.29
RPGR-206ENST00000474584 CCDC83Q8IWF9 413 aa16.86■□□□□ 0.29
RPGR-206ENST00000474584 UQCRHLA0A096LP55 91 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 ZBTB7CA1YPR0 619 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 UQCRHP07919 91 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 PTH1RQ03431 593 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 MPRIPQ6WCQ1 1025 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 ZSWIM6Q9HCJ5 1215 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.85■□□□□ 0.29
RPGR-206ENST00000474584 HIP1O00291 1037 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 LARGE1O95461 756 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 KSR2Q6VAB6 950 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
RPGR-206ENST00000474584 CCDC171Q6TFL3 1326 aa16.84■□□□□ 0.29
RPGR-206ENST00000474584 AACSQ86V21 672 aa16.84■□□□□ 0.29
RPGR-206ENST00000474584 KCNB2Q92953 911 aa16.84■□□□□ 0.29
RPGR-206ENST00000474584 HCLS1P14317 486 aaPredicted RBP16.84■□□□□ 0.29
RPGR-206ENST00000474584 ADCK5Q3MIX3 580 aa16.84■□□□□ 0.29
RPGR-206ENST00000474584 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
RPGR-206ENST00000474584 KCNJ4P48050 445 aa16.83■□□□□ 0.28
RPGR-206ENST00000474584 TPRNQ4KMQ1 711 aa16.83■□□□□ 0.28
RPGR-206ENST00000474584 MAP7D2Q96T17 732 aa16.83■□□□□ 0.28
RPGR-206ENST00000474584 MTMR6Q9Y217 621 aa16.83■□□□□ 0.28
RPGR-206ENST00000474584 PXDNQ92626 1479 aa16.82■□□□□ 0.28
RPGR-206ENST00000474584 RNMTO43148 476 aaKnown RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 PDIA4P13667 645 aaKnown RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 PSME1Q06323 249 aa16.82■□□□□ 0.28
RPGR-206ENST00000474584 NECTIN1Q15223 517 aa16.82■□□□□ 0.28
RPGR-206ENST00000474584 LRRC59Q96AG4 307 aaKnown RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 PA2G4Q9UQ80 394 aaKnown RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 SIPA1L3O60292 1781 aaPredicted RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
RPGR-206ENST00000474584 VPS37CA5D8V6 355 aaPredicted RBP16.81■□□□□ 0.28
RPGR-206ENST00000474584 DYNC1I1O14576 645 aa16.81■□□□□ 0.28
RPGR-206ENST00000474584 ADCY5O95622 1261 aa16.81■□□□□ 0.28
RPGR-206ENST00000474584 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
RPGR-206ENST00000474584 CWF19L2Q2TBE0 894 aaKnown RBP16.81■□□□□ 0.28
RPGR-206ENST00000474584 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
RPGR-206ENST00000474584 GRM8O00222 908 aa16.81■□□□□ 0.28
RPGR-206ENST00000474584 DDX58O95786 925 aaKnown RBP16.81■□□□□ 0.28
RPGR-206ENST00000474584 LINS1Q8NG48 757 aa16.81■□□□□ 0.28
RPGR-206ENST00000474584 PSMA5P28066 241 aa16.8■□□□□ 0.28
RPGR-206ENST00000474584 G3BP1Q13283 466 aaKnown RBP eCLIP16.8■□□□□ 0.28
RPGR-206ENST00000474584 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
RPGR-206ENST00000474584 CREB3L3Q68CJ9 461 aa16.8■□□□□ 0.28
RPGR-206ENST00000474584 HEG1Q9ULI3 1381 aa16.8■□□□□ 0.28
RPGR-206ENST00000474584 RBM10P98175 930 aaKnown RBP16.8■□□□□ 0.28
RPGR-206ENST00000474584 ME3Q16798 604 aa16.8■□□□□ 0.28
RPGR-206ENST00000474584 FAM13BQ9NYF5 915 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms