RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 ZNF831Q5JPB2 1677 aa26.03■■□□□ 1.76
SMIM11A-204ENST00000474455 INTS5Q6P9B9 1019 aaKnown RBP26.02■■□□□ 1.76
SMIM11A-204ENST00000474455 ERBB4Q15303 1308 aa26.02■■□□□ 1.76
SMIM11A-204ENST00000474455 CRKLP46109 303 aaKnown RBP26.01■■□□□ 1.75
SMIM11A-204ENST00000474455 MAP3K2Q9Y2U5 619 aa26.01■■□□□ 1.75
SMIM11A-204ENST00000474455 INTS3Q68E01 1043 aaKnown RBP26■■□□□ 1.75
SMIM11A-204ENST00000474455 CCNL1Q9UK58 526 aaPredicted RBP26■■□□□ 1.75
SMIM11A-204ENST00000474455 KSR2Q6VAB6 950 aa26■■□□□ 1.75
SMIM11A-204ENST00000474455 LRRC4BQ9NT99 713 aa26■■□□□ 1.75
SMIM11A-204ENST00000474455 ARFGEF2Q9Y6D5 1785 aa26■■□□□ 1.75
SMIM11A-204ENST00000474455 SMIM5Q71RC9 77 aa25.99■■□□□ 1.75
SMIM11A-204ENST00000474455 DNAAF4Q8WXU2 420 aa25.99■■□□□ 1.75
SMIM11A-204ENST00000474455 N4BP2Q86UW6 1770 aaPredicted RBP25.99■■□□□ 1.75
SMIM11A-204ENST00000474455 ZBTB7BO15156 539 aaPredicted RBP25.98■■□□□ 1.75
SMIM11A-204ENST00000474455 TNS1Q9HBL0 1735 aaKnown RBP25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 ANKRD13DQ6ZTN6 518 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 RIC3Q7Z5B4 369 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 IL27Q8NEV9 243 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 CCDC87Q9NVE4 849 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 DDX19BQ9UMR2 479 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 RREB1Q92766 1687 aa25.97■■□□□ 1.75
SMIM11A-204ENST00000474455 NUP188Q5SRE5 1749 aa25.96■■□□□ 1.75
SMIM11A-204ENST00000474455 RGS3P49796 1198 aa25.96■■□□□ 1.75
SMIM11A-204ENST00000474455 PROM2Q8N271 834 aa25.96■■□□□ 1.75
SMIM11A-204ENST00000474455 ARXQ96QS3 562 aa25.96■■□□□ 1.75
SMIM11A-204ENST00000474455 APBA3O96018 575 aa25.95■■□□□ 1.74
SMIM11A-204ENST00000474455 BEND3Q5T5X7 828 aa25.95■■□□□ 1.74
SMIM11A-204ENST00000474455 ZBTB3Q9H5J0 574 aa25.95■■□□□ 1.74
SMIM11A-204ENST00000474455 DDX58O95786 925 aaKnown RBP25.94■■□□□ 1.74
SMIM11A-204ENST00000474455 AFDNP55196 1824 aaKnown RBP25.93■■□□□ 1.74
SMIM11A-204ENST00000474455 CWF19L2Q2TBE0 894 aaKnown RBP25.93■■□□□ 1.74
SMIM11A-204ENST00000474455 C1orf115Q9H7X2 142 aa25.93■■□□□ 1.74
SMIM11A-204ENST00000474455 ZBTB40Q9NUA8 1239 aa25.93■■□□□ 1.74
SMIM11A-204ENST00000474455 SLC4A3P48751 1232 aa25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 CCT4P50991 539 aaKnown RBP25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 EIF5P55010 431 aaKnown RBP25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 MEIS3Q99687 375 aa25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 TBC1D2BQ9UPU7 963 aa25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 NUP98P52948 1817 aa25.92■■□□□ 1.74
SMIM11A-204ENST00000474455 IL6STP40189 918 aaPredicted RBP25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 AMIGO3Q86WK7 504 aa25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 PLBD2Q8NHP8 589 aa25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 MYD88Q99836 296 aa25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 PCDHB15Q9Y5E8 787 aa25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 PXDNLA1KZ92 1463 aa25.91■■□□□ 1.74
SMIM11A-204ENST00000474455 C4BP0C0L5 1744 aa25.9■■□□□ 1.74
SMIM11A-204ENST00000474455 IGKV5-2P06315 115 aa25.9■■□□□ 1.74
SMIM11A-204ENST00000474455 SRCIN1Q9C0H9 1055 aa25.9■■□□□ 1.74
SMIM11A-204ENST00000474455 TXNRD1Q16881 649 aa25.89■■□□□ 1.74
SMIM11A-204ENST00000474455 METTL22Q9BUU2 404 aaPredicted RBP25.89■■□□□ 1.74
SMIM11A-204ENST00000474455 ATP5J2-PTCD1G3V325 749 aa25.89■■□□□ 1.73
SMIM11A-204ENST00000474455 IGHDP01880 384 aa25.89■■□□□ 1.73
SMIM11A-204ENST00000474455 HLFQ16534 295 aa25.89■■□□□ 1.73
SMIM11A-204ENST00000474455 BECN1Q14457 450 aa25.88■■□□□ 1.73
SMIM11A-204ENST00000474455 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
SMIM11A-204ENST00000474455 PLSCR1O15162 318 aa25.87■■□□□ 1.73
SMIM11A-204ENST00000474455 USP44Q9H0E7 712 aa25.87■■□□□ 1.73
SMIM11A-204ENST00000474455 ATP10DQ9P241 1426 aa25.87■■□□□ 1.73
SMIM11A-204ENST00000474455 DZIP3Q86Y13 1208 aaKnown RBP25.87■■□□□ 1.73
SMIM11A-204ENST00000474455 MAP3K15Q6ZN16 1313 aa25.85■■□□□ 1.73
SMIM11A-204ENST00000474455 GNPATO15228 680 aa25.85■■□□□ 1.73
SMIM11A-204ENST00000474455 RC3H1Q5TC82 1133 aaKnown RBP25.85■■□□□ 1.73
SMIM11A-204ENST00000474455 KIF6Q6ZMV9 814 aa25.85■■□□□ 1.73
SMIM11A-204ENST00000474455 LINS1Q8NG48 757 aa25.85■■□□□ 1.73
SMIM11A-204ENST00000474455 UBR3Q6ZT12 1888 aa25.84■■□□□ 1.73
SMIM11A-204ENST00000474455 NEURL1BA8MQ27 555 aa25.84■■□□□ 1.73
SMIM11A-204ENST00000474455 NBPF7P0C2Y1 421 aaPredicted RBP25.84■■□□□ 1.73
SMIM11A-204ENST00000474455 SLC27A3Q5K4L6 730 aa25.84■■□□□ 1.73
SMIM11A-204ENST00000474455 COL15A1P39059 1388 aa25.84■■□□□ 1.73
SMIM11A-204ENST00000474455 JARID2Q92833 1246 aaPredicted RBP25.83■■□□□ 1.73
SMIM11A-204ENST00000474455 EN1Q05925 392 aaPredicted RBP25.83■■□□□ 1.72
SMIM11A-204ENST00000474455 RPS6KA4O75676 772 aa25.82■■□□□ 1.72
SMIM11A-204ENST00000474455 NEXNQ0ZGT2 675 aa25.82■■□□□ 1.72
SMIM11A-204ENST00000474455 ANKRD36CQ5JPF3 1778 aa25.81■■□□□ 1.72
SMIM11A-204ENST00000474455 ALDH1L1O75891 902 aa25.81■■□□□ 1.72
SMIM11A-204ENST00000474455 EZH2Q15910 746 aaKnown RBP25.81■■□□□ 1.72
SMIM11A-204ENST00000474455 GIGYF2Q6Y7W6 1299 aaKnown RBP25.81■■□□□ 1.72
SMIM11A-204ENST00000474455 PHF14O94880 888 aa25.8■■□□□ 1.72
SMIM11A-204ENST00000474455 CAMTA2O94983 1202 aa25.8■■□□□ 1.72
SMIM11A-204ENST00000474455 BCORQ6W2J9 1755 aa25.8■■□□□ 1.72
SMIM11A-204ENST00000474455 C4AP0C0L4 1744 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 FRAT2O75474 233 aaPredicted RBP25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 TCIRG1Q13488 830 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 GCKRQ14397 625 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 AK7Q96M32 723 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 GPTP24298 496 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 SIRT2Q8IXJ6 389 aa25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 RTCBQ9Y3I0 505 aaKnown RBP25.79■■□□□ 1.72
SMIM11A-204ENST00000474455 DEFB132Q7Z7B7 95 aa25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 ARHGEF1Q92888 912 aaKnown RBP25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 C9orf78Q9NZ63 289 aaPredicted RBP25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 SRP68Q9UHB9 627 aaKnown RBP25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 RGPD3A6NKT7 1758 aaPredicted RBP25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 RGPD4Q7Z3J3 1758 aa25.78■■□□□ 1.72
SMIM11A-204ENST00000474455 TUBGCP6Q96RT7 1819 aa25.77■■□□□ 1.72
SMIM11A-204ENST00000474455 CAMKK2Q96RR4 588 aa25.77■■□□□ 1.72
SMIM11A-204ENST00000474455 ISCA1Q9BUE6 129 aa25.77■■□□□ 1.72
SMIM11A-204ENST00000474455 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
SMIM11A-204ENST00000474455 ERVV-1B6SEH8 477 aa25.77■■□□□ 1.72
SMIM11A-204ENST00000474455 UBTFL1P0CB47 393 aaPredicted RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms