RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
VPS50-211ENST00000474412 SCAF11Q99590 1463 aaKnown RBP10.68□□□□□ -0.7
VPS50-211ENST00000474412 CCDC125Q86Z20 511 aa10.68□□□□□ -0.7
VPS50-211ENST00000474412 TSEN34Q9BSV6 310 aaKnown RBP10.68□□□□□ -0.7
VPS50-211ENST00000474412 CYLDQ9NQC7 956 aa10.68□□□□□ -0.7
VPS50-211ENST00000474412 CLTCL1P53675 1640 aa10.68□□□□□ -0.7
VPS50-211ENST00000474412 KIF1BO60333 1816 aa10.68□□□□□ -0.7
VPS50-211ENST00000474412 ROCK1Q13464 1354 aa10.67□□□□□ -0.7
VPS50-211ENST00000474412 KANK1Q14678 1352 aa10.67□□□□□ -0.7
VPS50-211ENST00000474412 Q6ZVU0 165 aa10.67□□□□□ -0.7
VPS50-211ENST00000474412 CPS1P31327 1500 aa10.67□□□□□ -0.7
VPS50-211ENST00000474412 CHD2O14647 1828 aaKnown RBP10.67□□□□□ -0.7
VPS50-211ENST00000474412 RPRD2Q5VT52 1461 aaKnown RBP10.67□□□□□ -0.7
VPS50-211ENST00000474412 ITGAEP38570 1179 aa10.66□□□□□ -0.7
VPS50-211ENST00000474412 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
VPS50-211ENST00000474412 NWD1Q149M9 1564 aa10.65□□□□□ -0.7
VPS50-211ENST00000474412 SEMA3FQ13275 785 aa10.65□□□□□ -0.7
VPS50-211ENST00000474412 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
VPS50-211ENST00000474412 PCDHB11Q9Y5F2 797 aa10.65□□□□□ -0.7
VPS50-211ENST00000474412 NRXN3Q9Y4C0 1643 aa10.65□□□□□ -0.7
VPS50-211ENST00000474412 SOX11P35716 441 aa10.64□□□□□ -0.71
VPS50-211ENST00000474412 RELBQ01201 579 aa10.64□□□□□ -0.71
VPS50-211ENST00000474412 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
VPS50-211ENST00000474412 LILRA1O75019 489 aa10.63□□□□□ -0.71
VPS50-211ENST00000474412 ADH1AP07327 375 aa10.63□□□□□ -0.71
VPS50-211ENST00000474412 SETD1AO15047 1707 aaKnown RBP10.63□□□□□ -0.71
VPS50-211ENST00000474412 CC2D2BQ6DHV5 1058 aa10.62□□□□□ -0.71
VPS50-211ENST00000474412 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
VPS50-211ENST00000474412 CLUAP1Q96AJ1 413 aa10.62□□□□□ -0.71
VPS50-211ENST00000474412 LRRC7Q96NW7 1537 aa10.62□□□□□ -0.71
VPS50-211ENST00000474412 IFT172Q9UG01 1749 aa10.61□□□□□ -0.71
VPS50-211ENST00000474412 ZFYVE9O95405 1425 aa10.61□□□□□ -0.71
VPS50-211ENST00000474412 NAIPQ13075 1403 aa10.61□□□□□ -0.71
VPS50-211ENST00000474412 MAN1A2O60476 641 aa10.61□□□□□ -0.71
VPS50-211ENST00000474412 ADD1P35611 737 aaKnown RBP10.61□□□□□ -0.71
VPS50-211ENST00000474412 ZNF775Q96BV0 537 aaPredicted RBP10.61□□□□□ -0.71
VPS50-211ENST00000474412 PPLO60437 1756 aa10.61□□□□□ -0.71
VPS50-211ENST00000474412 TRPM2O94759 1503 aa10.6□□□□□ -0.71
VPS50-211ENST00000474412 LTKP29376 864 aa10.6□□□□□ -0.71
VPS50-211ENST00000474412 ERVK-9P63128 1117 aa10.6□□□□□ -0.71
VPS50-211ENST00000474412 THEMISQ8N1K5 641 aaPredicted RBP10.6□□□□□ -0.71
VPS50-211ENST00000474412 CCDC85AQ96PX6 553 aaPredicted RBP10.6□□□□□ -0.71
VPS50-211ENST00000474412 ZNF395Q9H8N7 513 aaPredicted RBP10.6□□□□□ -0.71
VPS50-211ENST00000474412 TMEM2Q9UHN6 1383 aa10.6□□□□□ -0.71
VPS50-211ENST00000474412 SOBPA7XYQ1 873 aa10.59□□□□□ -0.71
VPS50-211ENST00000474412 SPINT1O43278 529 aa10.59□□□□□ -0.71
VPS50-211ENST00000474412 ANKLE2Q86XL3 938 aa10.59□□□□□ -0.71
VPS50-211ENST00000474412 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
VPS50-211ENST00000474412 XRN1Q8IZH2 1706 aaKnown RBP10.58□□□□□ -0.72
VPS50-211ENST00000474412 TTLL8A6PVC2 850 aa10.58□□□□□ -0.72
VPS50-211ENST00000474412 PTGIRP43119 386 aa10.58□□□□□ -0.72
VPS50-211ENST00000474412 SCTRP47872 440 aa10.58□□□□□ -0.72
VPS50-211ENST00000474412 IDI1Q13907 227 aa10.58□□□□□ -0.72
VPS50-211ENST00000474412 PROSER2Q86WR7 435 aaPredicted RBP10.58□□□□□ -0.72
VPS50-211ENST00000474412 POLMQ9NP87 494 aaPredicted RBP10.58□□□□□ -0.72
VPS50-211ENST00000474412 NEXMIFQ5QGS0 1516 aa10.58□□□□□ -0.72
VPS50-211ENST00000474412 NUP155O75694 1391 aa10.57□□□□□ -0.72
VPS50-211ENST00000474412 ATP5J2-PTCD1G3V325 749 aa10.57□□□□□ -0.72
VPS50-211ENST00000474412 MYCP01106 439 aaPredicted RBP10.57□□□□□ -0.72
VPS50-211ENST00000474412 CYP2U1Q7Z449 544 aa10.57□□□□□ -0.72
VPS50-211ENST00000474412 INSM2Q96T92 566 aaPredicted RBP10.57□□□□□ -0.72
VPS50-211ENST00000474412 HFM1A2PYH4 1435 aa10.57□□□□□ -0.72
VPS50-211ENST00000474412 SOS2Q07890 1332 aaPredicted RBP10.57□□□□□ -0.72
VPS50-211ENST00000474412 ROBO1Q9Y6N7 1651 aa10.57□□□□□ -0.72
VPS50-211ENST00000474412 DIP2AQ14689 1571 aa10.56□□□□□ -0.72
VPS50-211ENST00000474412 NALCNQ8IZF0 1738 aa10.56□□□□□ -0.72
VPS50-211ENST00000474412 POM121CA8CG34 1229 aa10.56□□□□□ -0.72
VPS50-211ENST00000474412 CDCA7Q9BWT1 371 aaPredicted RBP10.56□□□□□ -0.72
VPS50-211ENST00000474412 RIMS2Q9UQ26 1411 aa10.56□□□□□ -0.72
VPS50-211ENST00000474412 OXLD1Q5BKU9 147 aa10.55□□□□□ -0.72
VPS50-211ENST00000474412 PHTF2Q8N3S3 785 aa10.55□□□□□ -0.72
VPS50-211ENST00000474412 FIGNL2A6NMB9 653 aa10.54□□□□□ -0.72
VPS50-211ENST00000474412 CTSOP43234 321 aaPredicted RBP10.54□□□□□ -0.72
VPS50-211ENST00000474412 MED1Q15648 1581 aaPredicted RBP10.54□□□□□ -0.72
VPS50-211ENST00000474412 TXNDC2Q86VQ3 553 aa10.54□□□□□ -0.72
VPS50-211ENST00000474412 KDF1Q8NAX2 398 aaPredicted RBP10.54□□□□□ -0.72
VPS50-211ENST00000474412 ALG2Q9H553 416 aa10.54□□□□□ -0.72
VPS50-211ENST00000474412 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.54□□□□□ -0.72
VPS50-211ENST00000474412 DNMT3LQ9UJW3 386 aa10.54□□□□□ -0.72
VPS50-211ENST00000474412 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
VPS50-211ENST00000474412 SETBP1Q9Y6X0 1596 aa10.53□□□□□ -0.72
VPS50-211ENST00000474412 UBAP1LF5GYI3 381 aa10.53□□□□□ -0.72
VPS50-211ENST00000474412 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.53□□□□□ -0.72
VPS50-211ENST00000474412 TSGA10IPQ3SY00 556 aa10.53□□□□□ -0.72
VPS50-211ENST00000474412 PLPP7Q8NBV4 271 aa10.53□□□□□ -0.72
VPS50-211ENST00000474412 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
VPS50-211ENST00000474412 ADAMTS13Q76LX8 1427 aa10.52□□□□□ -0.73
VPS50-211ENST00000474412 MEN1O00255 615 aa10.52□□□□□ -0.73
VPS50-211ENST00000474412 PHLPP1O60346 1717 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 PIK3CDO00329 1044 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 USP4Q13107 963 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 MAP7D1Q3KQU3 841 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 SIRT1Q96EB6 747 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 NXF1Q9UBU9 619 aaKnown RBP10.51□□□□□ -0.73
VPS50-211ENST00000474412 PLEKHG1Q9ULL1 1385 aa10.51□□□□□ -0.73
VPS50-211ENST00000474412 A0A1W2PRU2 124 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 A6NJR5 290 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 TERTO14746 1132 aaKnown RBP10.5□□□□□ -0.73
VPS50-211ENST00000474412 TRAK2O60296 914 aa10.5□□□□□ -0.73
VPS50-211ENST00000474412 SKIP12755 728 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms