RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 ATP10DQ9P241 1426 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 PHF14O94880 888 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 IRX6P78412 446 aaPredicted RBP10.58□□□□□ -0.72
CNN3-205ENST00000474409 RC3H1Q5TC82 1133 aaKnown RBP10.58□□□□□ -0.72
CNN3-205ENST00000474409 SLC4A10Q6U841 1118 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 LRP10Q7Z4F1 713 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 RIC3Q7Z5B4 369 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 DEFB132Q7Z7B7 95 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 TNNQ9UQP3 1299 aa10.58□□□□□ -0.72
CNN3-205ENST00000474409 RTCBQ9Y3I0 505 aaKnown RBP10.58□□□□□ -0.72
CNN3-205ENST00000474409 A0A087WZG4 1122 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 PI4KAP2A4QPH2 592 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 F6X3S4 739 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 EIF5P55010 431 aaKnown RBP10.57□□□□□ -0.72
CNN3-205ENST00000474409 C20orf194Q5TEA3 1177 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 KSR2Q6VAB6 950 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 TTLL7Q6ZT98 887 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 DZIP3Q86Y13 1208 aaKnown RBP10.57□□□□□ -0.72
CNN3-205ENST00000474409 ITPRIPQ8IWB1 547 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 PROM2Q8N271 834 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 PI4KAP1Q8N8J0 262 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 PLBD2Q8NHP8 589 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 PANK1Q8TE04 598 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 DNAAF4Q8WXU2 420 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 ZBTB3Q9H5J0 574 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 MAP3K2Q9Y2U5 619 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 ANKRD31Q8N7Z5 1873 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 MAP3K15Q6ZN16 1313 aa10.57□□□□□ -0.72
CNN3-205ENST00000474409 NRXN2Q9P2S2 1712 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 TAF1P21675 1872 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 RPS6KA4O75676 772 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 PDE3AQ14432 1141 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 UPF1Q92900 1129 aaKnown RBP eCLIP10.56□□□□□ -0.72
CNN3-205ENST00000474409 A0A1B0GUL6 1792 aa10.56□□□□□ -0.72
CNN3-205ENST00000474409 RLBP1P12271 317 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 ADRA2BP18089 450 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 SSFA2P28290 1259 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 CCT4P50991 539 aaKnown RBP10.55□□□□□ -0.72
CNN3-205ENST00000474409 ZNF827Q17R98 1081 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 TMEM57Q8N5G2 664 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 MYD88Q99836 296 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 TFCP2L1Q9NZI6 479 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 TBC1D2BQ9UPU7 963 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 ZNF652Q9Y2D9 606 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 COG6Q9Y2V7 657 aa10.55□□□□□ -0.72
CNN3-205ENST00000474409 DLEC1Q9Y238 1755 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 TNRC6CQ9HCJ0 1690 aaKnown RBP10.54□□□□□ -0.72
CNN3-205ENST00000474409 ZPR1O75312 459 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 RFC4P35249 363 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 MVPQ14764 893 aaKnown RBP10.54□□□□□ -0.72
CNN3-205ENST00000474409 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 TRAPPC3LQ5T215 181 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 ILDR2Q71H61 639 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 METTL22Q9BUU2 404 aaPredicted RBP10.54□□□□□ -0.72
CNN3-205ENST00000474409 SRCIN1Q9C0H9 1055 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 ANO8Q9HCE9 1232 aaPredicted RBP10.54□□□□□ -0.72
CNN3-205ENST00000474409 DDX19BQ9UMR2 479 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
CNN3-205ENST00000474409 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.53□□□□□ -0.72
CNN3-205ENST00000474409 ERVV-1B6SEH8 477 aa10.53□□□□□ -0.72
CNN3-205ENST00000474409 MSH5O43196 834 aa10.53□□□□□ -0.72
CNN3-205ENST00000474409 CAMTA2O94983 1202 aa10.53□□□□□ -0.72
CNN3-205ENST00000474409 FKBP8Q14318 412 aa10.53□□□□□ -0.72
CNN3-205ENST00000474409 SMIM5Q71RC9 77 aa10.53□□□□□ -0.72
CNN3-205ENST00000474409 USP42Q9H9J4 1324 aaKnown RBP10.53□□□□□ -0.72
CNN3-205ENST00000474409 COL11A2P13942 1736 aaPredicted RBP10.53□□□□□ -0.72
CNN3-205ENST00000474409 INTS3Q68E01 1043 aaKnown RBP10.52□□□□□ -0.73
CNN3-205ENST00000474409 GIGYF2Q6Y7W6 1299 aaKnown RBP10.52□□□□□ -0.73
CNN3-205ENST00000474409 AMIGO3Q86WK7 504 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 LINS1Q8NG48 757 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
CNN3-205ENST00000474409 NARFQ9UHQ1 456 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 AK9Q5TCS8 1911 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 MYH13Q9UKX3 1938 aa10.52□□□□□ -0.73
CNN3-205ENST00000474409 ATP5J2-PTCD1G3V325 749 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 ALDH1L1O75891 902 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 HLFQ16534 295 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 CWF19L2Q2TBE0 894 aaKnown RBP10.51□□□□□ -0.73
CNN3-205ENST00000474409 BEND3Q5T5X7 828 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 USPL1Q5W0Q7 1092 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
CNN3-205ENST00000474409 SRP68Q9UHB9 627 aaKnown RBP10.51□□□□□ -0.73
CNN3-205ENST00000474409 PNPLA7Q6ZV29 1317 aa10.51□□□□□ -0.73
CNN3-205ENST00000474409 NEURL1BA8MQ27 555 aa10.5□□□□□ -0.73
CNN3-205ENST00000474409 IGKV5-2P06315 115 aa10.5□□□□□ -0.73
CNN3-205ENST00000474409 GPTP24298 496 aa10.5□□□□□ -0.73
CNN3-205ENST00000474409 TCIRG1Q13488 830 aa10.5□□□□□ -0.73
CNN3-205ENST00000474409 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
CNN3-205ENST00000474409 CWC25Q9NXE8 425 aaPredicted RBP10.5□□□□□ -0.73
CNN3-205ENST00000474409 C9orf78Q9NZ63 289 aaPredicted RBP10.5□□□□□ -0.73
CNN3-205ENST00000474409 IBTKQ9P2D0 1353 aaPredicted RBP10.5□□□□□ -0.73
CNN3-205ENST00000474409 BRCA1P38398 1863 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms