RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 PTGER2P43116 358 aa23.29■■□□□ 1.32
SNRPB-203ENST00000474384 POLD1P28340 1107 aa23.28■■□□□ 1.32
SNRPB-203ENST00000474384 HLFQ16534 295 aa23.28■■□□□ 1.32
SNRPB-203ENST00000474384 SGIP1Q9BQI5 828 aa23.28■■□□□ 1.32
SNRPB-203ENST00000474384 ZBTB3Q9H5J0 574 aa23.28■■□□□ 1.32
SNRPB-203ENST00000474384 MAP3K15Q6ZN16 1313 aa23.28■■□□□ 1.32
SNRPB-203ENST00000474384 SRCAPQ6ZRS2 3230 aa23.27■■□□□ 1.32
SNRPB-203ENST00000474384 SCN7AQ01118 1682 aa23.27■■□□□ 1.32
SNRPB-203ENST00000474384 COL24A1Q17RW2 1714 aa23.27■■□□□ 1.32
SNRPB-203ENST00000474384 ERVV-1B6SEH8 477 aa23.26■■□□□ 1.31
SNRPB-203ENST00000474384 MMP10P09238 476 aa23.26■■□□□ 1.31
SNRPB-203ENST00000474384 BICDL1Q6ZP65 573 aa23.26■■□□□ 1.31
SNRPB-203ENST00000474384 G2E3Q7L622 706 aa23.26■■□□□ 1.31
SNRPB-203ENST00000474384 BCORQ6W2J9 1755 aa23.26■■□□□ 1.31
SNRPB-203ENST00000474384 TM4SF1P30408 202 aa23.25■■□□□ 1.31
SNRPB-203ENST00000474384 TBC1D9BQ66K14 1250 aa23.25■■□□□ 1.31
SNRPB-203ENST00000474384 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
SNRPB-203ENST00000474384 CT47B1P0C2W7 299 aaPredicted RBP23.24■■□□□ 1.31
SNRPB-203ENST00000474384 NFIXQ14938 502 aa23.24■■□□□ 1.31
SNRPB-203ENST00000474384 CLEC4GQ6UXB4 293 aa23.24■■□□□ 1.31
SNRPB-203ENST00000474384 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
SNRPB-203ENST00000474384 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
SNRPB-203ENST00000474384 RGL2O15211 777 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 DDR1Q08345 913 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 PLBD2Q8NHP8 589 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 SSH1Q8WYL5 1049 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 PARP3Q9Y6F1 533 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 NUP98P52948 1817 aa23.22■■□□□ 1.31
SNRPB-203ENST00000474384 FLIIQ13045 1269 aa23.21■■□□□ 1.31
SNRPB-203ENST00000474384 GIGYF2Q6Y7W6 1299 aaKnown RBP23.21■■□□□ 1.31
SNRPB-203ENST00000474384 CACNA1FO60840 1977 aa23.21■■□□□ 1.31
SNRPB-203ENST00000474384 LRP5O75197 1615 aa23.2■■□□□ 1.3
SNRPB-203ENST00000474384 POLRMTO00411 1230 aaKnown RBP23.2■■□□□ 1.3
SNRPB-203ENST00000474384 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
SNRPB-203ENST00000474384 RIC3Q7Z5B4 369 aa23.2■■□□□ 1.3
SNRPB-203ENST00000474384 MRPL50Q8N5N7 158 aaKnown RBP23.2■■□□□ 1.3
SNRPB-203ENST00000474384 SETDB2Q96T68 719 aa23.2■■□□□ 1.3
SNRPB-203ENST00000474384 BCL2L13Q9BXK5 485 aa23.2■■□□□ 1.3
SNRPB-203ENST00000474384 PPP1R1BQ9UD71 204 aaPredicted RBP23.2■■□□□ 1.3
SNRPB-203ENST00000474384 NIP7Q9Y221 180 aaKnown RBP eCLIP23.2■■□□□ 1.31e-323■■■■■ 29.1
SNRPB-203ENST00000474384 DDX58O95786 925 aaKnown RBP23.19■■□□□ 1.3
SNRPB-203ENST00000474384 GPTP24298 496 aa23.18■■□□□ 1.3
SNRPB-203ENST00000474384 SMC4Q9NTJ3 1288 aa23.18■■□□□ 1.3
SNRPB-203ENST00000474384 PI4KAP2A4QPH2 592 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 SERPINB2P05120 415 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 RARSP54136 660 aaKnown RBP23.17■■□□□ 1.3
SNRPB-203ENST00000474384 FKBP5Q13451 457 aaPredicted RBP23.17■■□□□ 1.3
SNRPB-203ENST00000474384 TCIRG1Q13488 830 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 ZNF34Q8IZ26 560 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 PI4KAP1Q8N8J0 262 aa23.17■■□□□ 1.3
SNRPB-203ENST00000474384 HSP90AB3PQ58FF7 597 aa23.16■■□□□ 1.3
SNRPB-203ENST00000474384 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
SNRPB-203ENST00000474384 ATP10DQ9P241 1426 aa23.16■■□□□ 1.3
SNRPB-203ENST00000474384 CARMIL3Q8ND23 1372 aa23.15■■□□□ 1.3
SNRPB-203ENST00000474384 ARFGEF2Q9Y6D5 1785 aa23.15■■□□□ 1.3
SNRPB-203ENST00000474384 FAM177BA6PVY3 158 aa23.15■■□□□ 1.3
SNRPB-203ENST00000474384 KLHL34Q8N239 644 aa23.15■■□□□ 1.3
SNRPB-203ENST00000474384 ADCY9O60503 1353 aa23.14■■□□□ 1.3
SNRPB-203ENST00000474384 UBN2Q6ZU65 1347 aa23.14■■□□□ 1.3
SNRPB-203ENST00000474384 AFDNP55196 1824 aaKnown RBP23.13■■□□□ 1.29
SNRPB-203ENST00000474384 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
SNRPB-203ENST00000474384 NBPF5PQ86XG9 351 aaPredicted RBP23.13■■□□□ 1.29
SNRPB-203ENST00000474384 MYD88Q99836 296 aa23.13■■□□□ 1.29
SNRPB-203ENST00000474384 METTL22Q9BUU2 404 aaPredicted RBP23.13■■□□□ 1.29
SNRPB-203ENST00000474384 ANKRD36CQ5JPF3 1778 aa23.12■■□□□ 1.29
SNRPB-203ENST00000474384 ISCA1Q9BUE6 129 aa23.12■■□□□ 1.29
SNRPB-203ENST00000474384 FHDC1Q9C0D6 1143 aaPredicted RBP23.12■■□□□ 1.29
SNRPB-203ENST00000474384 F6X3S4 739 aa23.11■■□□□ 1.29
SNRPB-203ENST00000474384 BCAR3O75815 825 aa23.11■■□□□ 1.29
SNRPB-203ENST00000474384 SUSD4Q5VX71 490 aa23.11■■□□□ 1.29
SNRPB-203ENST00000474384 CCDC24Q8N4L8 307 aa23.11■■□□□ 1.29
SNRPB-203ENST00000474384 NPHP1O15259 732 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 PARP10Q53GL7 1025 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 PRR5LQ6MZQ0 368 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 NLRP10Q86W26 655 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 CNBD1Q8NA66 436 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 DNAAF4Q8WXU2 420 aa23.1■■□□□ 1.29
SNRPB-203ENST00000474384 NOB1Q9ULX3 412 aaKnown RBP23.1■■□□□ 1.29
SNRPB-203ENST00000474384 NRXN2Q9P2S2 1712 aa23.09■■□□□ 1.29
SNRPB-203ENST00000474384 BRPF1P55201 1214 aaPredicted RBP23.09■■□□□ 1.29
SNRPB-203ENST00000474384 PTPRCP08575 1304 aa23.08■■□□□ 1.29
SNRPB-203ENST00000474384 NEXNQ0ZGT2 675 aa23.08■■□□□ 1.29
SNRPB-203ENST00000474384 PPP1R42Q7Z4L9 355 aa23.08■■□□□ 1.29
SNRPB-203ENST00000474384 NYXQ9GZU5 481 aa23.08■■□□□ 1.29
SNRPB-203ENST00000474384 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
SNRPB-203ENST00000474384 GTF2E1P29083 439 aaPredicted RBP23.07■■□□□ 1.28
SNRPB-203ENST00000474384 TRIM28Q13263 835 aaKnown RBP23.07■■□□□ 1.28
SNRPB-203ENST00000474384 SYT17Q9BSW7 474 aa23.07■■□□□ 1.28
SNRPB-203ENST00000474384 UTP14AQ9BVJ6 771 aaKnown RBP23.07■■□□□ 1.28
SNRPB-203ENST00000474384 C10orf71Q711Q0 1435 aa23.07■■□□□ 1.28
SNRPB-203ENST00000474384 NTSR2O95665 410 aa23.06■■□□□ 1.28
SNRPB-203ENST00000474384 IGKV5-2P06315 115 aa23.06■■□□□ 1.28
SNRPB-203ENST00000474384 ERFEQ4G0M1 354 aa23.06■■□□□ 1.28
SNRPB-203ENST00000474384 NUTM1Q86Y26 1132 aa23.06■■□□□ 1.28
SNRPB-203ENST00000474384 ST5P78524 1137 aa23.05■■□□□ 1.28
SNRPB-203ENST00000474384 CWF19L2Q2TBE0 894 aaKnown RBP23.05■■□□□ 1.28
SNRPB-203ENST00000474384 SLC4A10Q6U841 1118 aa23.05■■□□□ 1.28
SNRPB-203ENST00000474384 CCDC191Q8NCU4 936 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms