RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 XRN1Q8IZH2 1706 aaKnown RBP10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 ARMC2Q8NEN0 867 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 C1QTNF2Q9BXJ5 285 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 DLC1Q96QB1 1528 aa10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 CENPJQ9HC77 1338 aaPredicted RBP10.51□□□□□ -0.73
PKNOX1-205ENST00000474336 NPHP4O75161 1426 aaPredicted RBP10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 STRCQ7RTU9 1775 aa10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 MAP4K5Q9Y4K4 846 aa10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 EMILIN1Q9Y6C2 1016 aa10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 WASHC2AQ641Q2 1341 aa10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 METP08581 1390 aa10.5□□□□□ -0.73
PKNOX1-205ENST00000474336 PER1O15534 1290 aaPredicted RBP10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 FSHRP23945 695 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 TMF1P82094 1093 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 SAFB2Q14151 953 aaKnown RBP eCLIP10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 SH3RF1Q7Z6J0 888 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 POGKQ9P215 609 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 KIF7Q2M1P5 1343 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 LRPPRCP42704 1394 aaKnown RBP10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 DISP3Q9P2K9 1392 aa10.49□□□□□ -0.73
PKNOX1-205ENST00000474336 TTLL8A6PVC2 850 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 ZMYND10O75800 440 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 HSPA2P54652 639 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 PTSQ03393 145 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 VASH1Q7L8A9 365 aaPredicted RBP10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 CABLES1Q8TDN4 633 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 NANOS1Q8WY41 292 aaKnown RBP10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 MED14O60244 1454 aa10.48□□□□□ -0.73
PKNOX1-205ENST00000474336 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 VSIG10Q8N0Z9 540 aa10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 PRAM1Q96QH2 718 aa10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 COL25A1Q9BXS0 654 aaPredicted RBP10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 TULP4Q9NRJ4 1543 aa10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 ITSN1Q15811 1721 aa10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
PKNOX1-205ENST00000474336 NBPF14Q5TI25 921 aa10.46□□□□□ -0.73
PKNOX1-205ENST00000474336 CCDC116Q8IYX3 515 aa10.46□□□□□ -0.73
PKNOX1-205ENST00000474336 TESK2Q96S53 571 aa10.46□□□□□ -0.73
PKNOX1-205ENST00000474336 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.46□□□□□ -0.74
PKNOX1-205ENST00000474336 RGPD8O14715 1765 aaPredicted RBP10.45□□□□□ -0.74
PKNOX1-205ENST00000474336 TECPR2O15040 1411 aa10.45□□□□□ -0.74
PKNOX1-205ENST00000474336 SBNO2Q9Y2G9 1366 aa10.45□□□□□ -0.74
PKNOX1-205ENST00000474336 TSC1Q92574 1164 aa10.45□□□□□ -0.74
PKNOX1-205ENST00000474336 STRCP1A6NGW2 1772 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 NWD1Q149M9 1564 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 PLEKHH1Q9ULM0 1364 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 CSPP1Q1MSJ5 1256 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 CDCA8Q53HL2 280 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 ZNF385CQ66K41 422 aaPredicted RBP10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 TBX22Q9Y458 520 aa10.44□□□□□ -0.74
PKNOX1-205ENST00000474336 ADGRB2O60241 1585 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 PTCH1Q13635 1447 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 FAM135BQ49AJ0 1406 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 FIGNL2A6NMB9 653 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 SH3BP5LQ7L8J4 393 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 CCDC155Q8N6L0 562 aa10.43□□□□□ -0.74
PKNOX1-205ENST00000474336 PIK3R4Q99570 1358 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 ROBO2Q9HCK4 1378 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 EVC2Q86UK5 1308 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 MAGEB6P1A0A0J9YX57 407 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 SVOPQ8N4V2 548 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 AMOTL2Q9Y2J4 779 aa10.42□□□□□ -0.74
PKNOX1-205ENST00000474336 FMN2Q9NZ56 1722 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 NUTM2BA6NNL0 878 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 NUTM2EB1AL46 878 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 SRPK2P78362 688 aaKnown RBP10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 RNFT1Q5M7Z0 435 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 Q6ZVU0 165 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 NUTM2AQ8IVF1 878 aaPredicted RBP10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 PGPEP1Q9NXJ5 209 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 KIF20BQ96Q89 1820 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 TOPAZ1Q8N9V7 1692 aa10.41□□□□□ -0.74
PKNOX1-205ENST00000474336 AKAP12Q02952 1782 aa10.4□□□□□ -0.74
PKNOX1-205ENST00000474336 SPINT1O43278 529 aa10.4□□□□□ -0.74
PKNOX1-205ENST00000474336 CNGB1Q14028 1251 aaPredicted RBP10.4□□□□□ -0.74
PKNOX1-205ENST00000474336 SLC35F4A4IF30 521 aa10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 SLURP2P0DP57 97 aa10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 KCNA6P17658 529 aa10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 TUSC1Q2TAM9 212 aa10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 TMC1Q8TDI8 760 aa10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 ZC3H15Q8WU90 426 aaKnown RBP10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 GPKOWQ92917 476 aaPredicted RBP eCLIP10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 DNMT3AQ9Y6K1 912 aaPredicted RBP10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 XIRP1Q702N8 1843 aaKnown RBP10.39□□□□□ -0.75
PKNOX1-205ENST00000474336 NKTRP30414 1462 aaKnown RBP10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 ANP32CO43423 234 aa10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 IGHA1P01876 353 aa10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 CBLBQ13191 982 aa10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 CDC42BPGQ6DT37 1551 aa10.38□□□□□ -0.75
PKNOX1-205ENST00000474336 MON2Q7Z3U7 1717 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms