RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 CCDC144CPQ8IYA2 1237 aa22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 NUDT16Q96DE0 195 aaKnown RBP22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 ZNF215Q9UL58 517 aaPredicted RBP22.1■■□□□ 1.13
ECHDC1-214ENST00000474289 TDRD7Q8NHU6 1098 aaKnown RBP22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 PI4K2BQ8TCG2 481 aa22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 DACT1Q9NYF0 836 aa22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 FAM53CQ9NYF3 392 aa22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 CLIP2Q9UDT6 1046 aa22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 LRRFIP2Q9Y608 721 aaKnown RBP22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 SPG7Q9UQ90 795 aa22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 V9GYY5 206 aaPredicted RBP22.09■■□□□ 1.13
ECHDC1-214ENST00000474289 ELP1O95163 1332 aa22.08■■□□□ 1.13
ECHDC1-214ENST00000474289 NAP1L2Q9ULW6 460 aaPredicted RBP22.08■■□□□ 1.13
ECHDC1-214ENST00000474289 CDK11BP21127 795 aaKnown RBP22.08■■□□□ 1.12
ECHDC1-214ENST00000474289 FAM173BQ6P4H8 233 aa22.08■■□□□ 1.12
ECHDC1-214ENST00000474289 TXNDC2Q86VQ3 553 aa22.08■■□□□ 1.12
ECHDC1-214ENST00000474289 SOS1Q07889 1333 aaPredicted RBP22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 FERMT3Q86UX7 667 aa22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 USP27XA6NNY8 438 aa22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 FBXO38Q6PIJ6 1188 aa22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 CWC27Q6UX04 472 aaKnown RBP22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 TIGD1Q96MW7 591 aa22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 ARHGEF10O15013 1369 aa22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 SETD1AO15047 1707 aaKnown RBP22.07■■□□□ 1.12
ECHDC1-214ENST00000474289 NRKQ7Z2Y5 1582 aa22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 RBM6P78332 1123 aaKnown RBP22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 VPS53Q5VIR6 699 aa22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 RBM43Q6ZSC3 357 aaKnown RBP22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 CDC37L1Q7L3B6 337 aa22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 SH2B1Q9NRF2 756 aaPredicted RBP22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 PDRG1Q9NUG6 133 aa22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 ADCK5Q3MIX3 580 aa22.06■■□□□ 1.12
ECHDC1-214ENST00000474289 TTC21AQ8NDW8 1320 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ZNF165P49910 485 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ME3Q16798 604 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ZSCAN31Q96LW9 406 aaPredicted RBP22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 CCDC171Q6TFL3 1326 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ERICH4A6NGS2 130 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 FLIIQ13045 1269 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 LRRC8AQ8IWT6 810 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 NECAB1Q8N987 351 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 JAKMIP1Q96N16 626 aaKnown RBP22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 DNAJC25Q9H1X3 360 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ST7Q9NRC1 585 aa22.05■■□□□ 1.12
ECHDC1-214ENST00000474289 ELF2Q15723 593 aa22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 LARP1BQ659C4 914 aaKnown RBP22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 NYAP1Q6ZVC0 841 aa22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 CCDC61Q9Y6R9 512 aa22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 MON2Q7Z3U7 1717 aa22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 CNTROBQ8N137 903 aa22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 DDX19AQ9NUU7 478 aaKnown RBP22.04■■□□□ 1.12
ECHDC1-214ENST00000474289 XRN1Q8IZH2 1706 aaKnown RBP22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 METP08581 1390 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 CDC25BP30305 580 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 ARID5BQ14865 1188 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 STK31Q9BXU1 1019 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 CLSTN2Q9H4D0 955 aa22.03■■□□□ 1.12
ECHDC1-214ENST00000474289 PTPN14Q15678 1187 aa22.02■■□□□ 1.12
ECHDC1-214ENST00000474289 ERBB3P21860 1342 aa22.02■■□□□ 1.12
ECHDC1-214ENST00000474289 GOLGA6L4A6NEF3 574 aa22.02■■□□□ 1.12
ECHDC1-214ENST00000474289 ERO1AQ96HE7 468 aa22.02■■□□□ 1.12
ECHDC1-214ENST00000474289 ZSWIM6Q9HCJ5 1215 aa22.02■■□□□ 1.12
ECHDC1-214ENST00000474289 C3P01024 1663 aa22.02■■□□□ 1.11
ECHDC1-214ENST00000474289 FOXO3O43524 673 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 SSH3Q8TE77 659 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 CYP46A1Q9Y6A2 500 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 NPHP3Q7Z494 1330 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 PTH1RQ03431 593 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 SLFNL1Q499Z3 407 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 HSP90AB2PQ58FF8 381 aa22.01■■□□□ 1.11
ECHDC1-214ENST00000474289 NR1I2O75469 434 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 PRPF40BQ6NWY9 871 aaKnown RBP22■■□□□ 1.11
ECHDC1-214ENST00000474289 USP44Q9H0E7 712 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 ZNF446Q9NWS9 450 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 CALCOCO1Q9P1Z2 691 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 SURF6O75683 361 aaKnown RBP22■■□□□ 1.11
ECHDC1-214ENST00000474289 RHPN1Q8TCX5 695 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 DDX54Q8TDD1 881 aaKnown RBP22■■□□□ 1.11
ECHDC1-214ENST00000474289 SPATA32Q96LK8 384 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 SCAND2PQ9GZW5 306 aaPredicted RBP22■■□□□ 1.11
ECHDC1-214ENST00000474289 TPCN1Q9ULQ1 816 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 PRR36Q9H6K5 1346 aa22■■□□□ 1.11
ECHDC1-214ENST00000474289 IPO4Q8TEX9 1081 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-214ENST00000474289 TM6SF1Q9BZW5 370 aa21.99■■□□□ 1.11
ECHDC1-214ENST00000474289 TFIP11Q9UBB9 837 aaKnown RBP21.99■■□□□ 1.11
ECHDC1-214ENST00000474289 RAB11FIP3O75154 756 aa21.99■■□□□ 1.11
ECHDC1-214ENST00000474289 KIF1BPQ96EK5 621 aa21.99■■□□□ 1.11
ECHDC1-214ENST00000474289 SOX12O15370 315 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 UBTFL1P0CB47 393 aaPredicted RBP21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 SKILP12757 684 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 LEO1Q8WVC0 666 aaPredicted RBP21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 CRYBG1Q9Y4K1 1723 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 NEMFO60524 1076 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 FAM193AP78312 1265 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 SLC20A2Q08357 652 aa21.98■■□□□ 1.11
ECHDC1-214ENST00000474289 TULP2O00295 520 aa21.97■■□□□ 1.11
ECHDC1-214ENST00000474289 SARM1Q6SZW1 724 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms