RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 C16orf71Q8IYS4 520 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 CCDC24Q8N4L8 307 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 CNBD1Q8NA66 436 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 MIS18AQ9NYP9 233 aa14.65□□□□□ -0.06
SEMA4D-216ENST00000474258 RGL2O15211 777 aa14.64□□□□□ -0.07
SEMA4D-216ENST00000474258 NFE2L2Q16236 605 aa14.64□□□□□ -0.07
SEMA4D-216ENST00000474258 RBM46Q8TBY0 533 aaKnown RBP14.64□□□□□ -0.07
SEMA4D-216ENST00000474258 TIAM2Q8IVF5 1701 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 NBPF26B4DH59 902 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 NBPF10Q6P3W6 841 aaKnown RBP14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 NBPF15Q8N660 670 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 CNKSR1Q969H4 720 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 RRAGCQ9HB90 399 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 MAPK8IP3Q9UPT6 1336 aa14.63□□□□□ -0.07
SEMA4D-216ENST00000474258 APLP1P51693 650 aa14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 RALBP1Q15311 655 aa14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 STYK1Q6J9G0 422 aa14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 NBPF5PQ86XG9 351 aaPredicted RBP14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 MASTLQ96GX5 879 aa14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 CEP350Q5VT06 3117 aa14.62□□□□□ -0.07
SEMA4D-216ENST00000474258 GLTPD2A6NH11 291 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 NFKBIEO00221 500 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 C21orf2O43822 256 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 SRGNP10124 158 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 PRELPP51888 382 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 TPTE2Q6XPS3 522 aa14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
SEMA4D-216ENST00000474258 EIF4A1P60842 406 aaKnown RBP14.6□□□□□ -0.07
SEMA4D-216ENST00000474258 FSTL1Q12841 308 aa14.6□□□□□ -0.07
SEMA4D-216ENST00000474258 WDR90Q96KV7 1748 aa14.6□□□□□ -0.07
SEMA4D-216ENST00000474258 SOGA3Q5TF21 947 aa14.59□□□□□ -0.07
SEMA4D-216ENST00000474258 THUMPD2Q9BTF0 503 aaKnown RBP14.59□□□□□ -0.07
SEMA4D-216ENST00000474258 VEGFAP15692 232 aaPredicted RBP14.58□□□□□ -0.08
SEMA4D-216ENST00000474258 HLFQ16534 295 aa14.58□□□□□ -0.08
SEMA4D-216ENST00000474258 DPY19L2Q6NUT2 758 aa14.58□□□□□ -0.08
SEMA4D-216ENST00000474258 PRPF40BQ6NWY9 871 aaKnown RBP14.58□□□□□ -0.08
SEMA4D-216ENST00000474258 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
SEMA4D-216ENST00000474258 KLRG2A4D1S0 409 aaPredicted RBP14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 ERVV-1B6SEH8 477 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 NPR1P16066 1061 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 RIPK4P57078 832 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 DDX10Q13206 875 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 ERFEQ4G0M1 354 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 TAOK3Q9H2K8 898 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 LTBP3Q9NS15 1303 aa14.57□□□□□ -0.08
SEMA4D-216ENST00000474258 FAM177BA6PVY3 158 aa14.56□□□□□ -0.08
SEMA4D-216ENST00000474258 GTF2E1P29083 439 aaPredicted RBP14.56□□□□□ -0.08
SEMA4D-216ENST00000474258 SMC1BQ8NDV3 1235 aa14.56□□□□□ -0.08
SEMA4D-216ENST00000474258 TSPYL4Q9UJ04 414 aa14.56□□□□□ -0.08
SEMA4D-216ENST00000474258 LMOD3Q0VAK6 560 aa14.55□□□□□ -0.08
SEMA4D-216ENST00000474258 KIF6Q6ZMV9 814 aa14.55□□□□□ -0.08
SEMA4D-216ENST00000474258 DNAJC5GQ8N7S2 189 aa14.55□□□□□ -0.08
SEMA4D-216ENST00000474258 NYXQ9GZU5 481 aa14.55□□□□□ -0.08
SEMA4D-216ENST00000474258 MAP3K15Q6ZN16 1313 aa14.55□□□□□ -0.08
SEMA4D-216ENST00000474258 MYL6BP14649 208 aa14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 TMPOP42166 694 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 TTLL7Q6ZT98 887 aa14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 C7orf43Q8WVR3 580 aa14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 BABAM1Q9NWV8 329 aa14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 ERBB4Q15303 1308 aa14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 MYBBP1AQ9BQG0 1328 aaKnown RBP14.54□□□□□ -0.08
SEMA4D-216ENST00000474258 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
SEMA4D-216ENST00000474258 CCDC93Q567U6 631 aa14.53□□□□□ -0.08
SEMA4D-216ENST00000474258 POTECB2RU33 542 aa14.52□□□□□ -0.09
SEMA4D-216ENST00000474258 DIEXFQ68CQ4 756 aaKnown RBP14.52□□□□□ -0.09
SEMA4D-216ENST00000474258 ZBTB3Q9H5J0 574 aa14.52□□□□□ -0.09
SEMA4D-216ENST00000474258 SCN4AP35499 1836 aa14.52□□□□□ -0.09
SEMA4D-216ENST00000474258 EIF2S2P20042 333 aaKnown RBP14.51□□□□□ -0.09
SEMA4D-216ENST00000474258 NUTM1Q86Y26 1132 aa14.51□□□□□ -0.09
SEMA4D-216ENST00000474258 RTKN2Q8IZC4 609 aa14.51□□□□□ -0.09
SEMA4D-216ENST00000474258 GPTP24298 496 aa14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 FKBP4Q02790 459 aaKnown RBP eCLIP14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 GIGYF2Q6Y7W6 1299 aaKnown RBP14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 CCDC146Q8IYE0 955 aa14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 ZNF34Q8IZ26 560 aa14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 ANKRD36CQ5JPF3 1778 aa14.5□□□□□ -0.09
SEMA4D-216ENST00000474258 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 UBN2Q6ZU65 1347 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 DDNO94850 711 aaPredicted RBP14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 HTRA3P83110 453 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 WDR43Q15061 677 aaKnown RBP eCLIP14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 NEUROD2Q15784 382 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 CRY2Q49AN0 593 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 SUSD4Q5VX71 490 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 PPP1R42Q7Z4L9 355 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 RUNDC1Q96C34 613 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 KLRG1Q96E93 195 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 RIC1Q4ADV7 1423 aa14.49□□□□□ -0.09
SEMA4D-216ENST00000474258 ABCC12Q96J65 1359 aa14.48□□□□□ -0.09
SEMA4D-216ENST00000474258 PDIA6Q15084 440 aa14.48□□□□□ -0.09
SEMA4D-216ENST00000474258 OLFM4Q6UX06 510 aa14.48□□□□□ -0.09
SEMA4D-216ENST00000474258 RPGRQ92834 1020 aaKnown RBP14.48□□□□□ -0.09
SEMA4D-216ENST00000474258 CHL1O00533 1208 aa14.47□□□□□ -0.09
SEMA4D-216ENST00000474258 PARP10Q53GL7 1025 aa14.47□□□□□ -0.09
SEMA4D-216ENST00000474258 CC2D2BQ6DHV5 1058 aa14.47□□□□□ -0.09
SEMA4D-216ENST00000474258 LRP10Q7Z4F1 713 aa14.47□□□□□ -0.09
SEMA4D-216ENST00000474258 ZNF277Q9NRM2 450 aaPredicted RBP14.47□□□□□ -0.09
SEMA4D-216ENST00000474258 IQCA1LA6NCM1 817 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms