RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ST5P78524 1137 aa27.19■■□□□ 1.94
APP-215ENST00000474136 CC2D1BQ5T0F9 858 aaKnown RBP27.19■■□□□ 1.94
APP-215ENST00000474136 MASTLQ96GX5 879 aa27.19■■□□□ 1.94
APP-215ENST00000474136 PIP4K2AP48426 406 aaPredicted RBP27.18■■□□□ 1.94
APP-215ENST00000474136 FMNL2Q96PY5 1086 aa27.18■■□□□ 1.94
APP-215ENST00000474136 TAF1DQ9H5J8 278 aaPredicted RBP27.18■■□□□ 1.94
APP-215ENST00000474136 LDHDQ86WU2 507 aa27.17■■□□□ 1.94
APP-215ENST00000474136 DZIP3Q86Y13 1208 aaKnown RBP27.17■■□□□ 1.94
APP-215ENST00000474136 U2SURPO15042 1029 aaKnown RBP27.16■■□□□ 1.94
APP-215ENST00000474136 SOGA3Q5TF21 947 aa27.16■■□□□ 1.94
APP-215ENST00000474136 NPM2Q86SE8 214 aaKnown RBP27.16■■□□□ 1.94
APP-215ENST00000474136 GAS2L2Q8NHY3 880 aa27.16■■□□□ 1.94
APP-215ENST00000474136 C7orf43Q8WVR3 580 aa27.16■■□□□ 1.94
APP-215ENST00000474136 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
APP-215ENST00000474136 IQCA1LA6NCM1 817 aa27.16■■□□□ 1.94
APP-215ENST00000474136 L3MBTL3Q96JM7 780 aaPredicted RBP27.16■■□□□ 1.94
APP-215ENST00000474136 PER1O15534 1290 aaPredicted RBP27.15■■□□□ 1.94
APP-215ENST00000474136 VEGFBP49765 207 aa27.15■■□□□ 1.94
APP-215ENST00000474136 ZNF541Q9H0D2 1346 aa27.14■■□□□ 1.94
APP-215ENST00000474136 OLFM4Q6UX06 510 aa27.14■■□□□ 1.93
APP-215ENST00000474136 PRDM10Q9NQV6 1147 aa27.14■■□□□ 1.93
APP-215ENST00000474136 USP16Q9Y5T5 823 aa27.14■■□□□ 1.93
APP-215ENST00000474136 CACNA1SQ13698 1873 aa27.14■■□□□ 1.93
APP-215ENST00000474136 COL3A1P02461 1466 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 ITGBL1O95965 494 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 CNGB1Q14028 1251 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 CCDC93Q567U6 631 aa27.13■■□□□ 1.93
APP-215ENST00000474136 EAPPQ56P03 285 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 NBPF5PQ86XG9 351 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 ZNF277Q9NRM2 450 aaPredicted RBP27.13■■□□□ 1.93
APP-215ENST00000474136 PRAMEF22A3QJZ6 481 aa27.12■■□□□ 1.93
APP-215ENST00000474136 TMEM88BA6NKF7 163 aa27.12■■□□□ 1.93
APP-215ENST00000474136 SIPA1L3O60292 1781 aaPredicted RBP27.11■■□□□ 1.93
APP-215ENST00000474136 CEMIPQ8WUJ3 1361 aa27.11■■□□□ 1.93
APP-215ENST00000474136 BTBD11A6QL63 1104 aa27.11■■□□□ 1.93
APP-215ENST00000474136 CTCFP49711 727 aaPredicted RBP27.1■■□□□ 1.93
APP-215ENST00000474136 FKBP4Q02790 459 aaKnown RBP eCLIP27.1■■□□□ 1.93
APP-215ENST00000474136 AIDAQ96BJ3 306 aa27.1■■□□□ 1.93
APP-215ENST00000474136 NPR1P16066 1061 aa27.09■■□□□ 1.93
APP-215ENST00000474136 PHACTR3Q96KR7 559 aa27.09■■□□□ 1.93
APP-215ENST00000474136 CLEC11AQ9Y240 323 aa27.09■■□□□ 1.93
APP-215ENST00000474136 BCORQ6W2J9 1755 aa27.08■■□□□ 1.93
APP-215ENST00000474136 ARFGEF2Q9Y6D5 1785 aa27.08■■□□□ 1.93
APP-215ENST00000474136 HACL1Q9UJ83 578 aa27.08■■□□□ 1.93
APP-215ENST00000474136 CLEC4GQ6UXB4 293 aa27.07■■□□□ 1.92
APP-215ENST00000474136 WBP1LQ9NX94 342 aa27.07■■□□□ 1.92
APP-215ENST00000474136 SCN4AP35499 1836 aa27.07■■□□□ 1.92
APP-215ENST00000474136 KLRG2A4D1S0 409 aaPredicted RBP27.06■■□□□ 1.92
APP-215ENST00000474136 FAM177BA6PVY3 158 aa27.06■■□□□ 1.92
APP-215ENST00000474136 EPHX2P34913 555 aa27.06■■□□□ 1.92
APP-215ENST00000474136 LBX1P52954 281 aa27.06■■□□□ 1.92
APP-215ENST00000474136 ZNF316A6NFI3 1004 aaPredicted RBP27.05■■□□□ 1.92
APP-215ENST00000474136 RNF123Q5XPI4 1314 aa27.05■■□□□ 1.92
APP-215ENST00000474136 MAP1SQ66K74 1059 aaPredicted RBP27.04■■□□□ 1.92
APP-215ENST00000474136 NIP7Q9Y221 180 aaKnown RBP eCLIP27.04■■□□□ 1.92
APP-215ENST00000474136 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
APP-215ENST00000474136 PRKAR2BP31323 418 aa27.03■■□□□ 1.92
APP-215ENST00000474136 CNTROBQ8N137 903 aa27.03■■□□□ 1.92
APP-215ENST00000474136 NBPF26B4DH59 902 aa27.02■■□□□ 1.92
APP-215ENST00000474136 NBPF10Q6P3W6 841 aaKnown RBP27.02■■□□□ 1.92
APP-215ENST00000474136 TPTE2Q6XPS3 522 aa27.02■■□□□ 1.92
APP-215ENST00000474136 RTKN2Q8IZC4 609 aa27.02■■□□□ 1.92
APP-215ENST00000474136 SYNE4Q8N205 404 aa27.02■■□□□ 1.92
APP-215ENST00000474136 NBPF15Q8N660 670 aa27.02■■□□□ 1.92
APP-215ENST00000474136 FZD9O00144 591 aa27.01■■□□□ 1.91
APP-215ENST00000474136 SNRPA1P09661 255 aaKnown RBP27.01■■□□□ 1.91
APP-215ENST00000474136 IARSP41252 1262 aaKnown RBP27.01■■□□□ 1.91
APP-215ENST00000474136 RASSF10A6NK89 507 aa27■■□□□ 1.91
APP-215ENST00000474136 DEFB115Q30KQ5 88 aa27■■□□□ 1.91
APP-215ENST00000474136 RSPH6AQ9H0K4 717 aa27■■□□□ 1.91
APP-215ENST00000474136 ADAMTSL1Q8N6G6 1762 aa27■■□□□ 1.91
APP-215ENST00000474136 HSPA8P11142 646 aaKnown RBP26.99■■□□□ 1.91
APP-215ENST00000474136 MCM10Q7L590 875 aa26.99■■□□□ 1.91
APP-215ENST00000474136 PNMA8AQ86V59 439 aaPredicted RBP26.99■■□□□ 1.91
APP-215ENST00000474136 HLFQ16534 295 aa26.98■■□□□ 1.91
APP-215ENST00000474136 WDR33Q9C0J8 1336 aaKnown RBP26.96■■□□□ 1.91
APP-215ENST00000474136 GPC2Q8N158 579 aa26.96■■□□□ 1.91
APP-215ENST00000474136 ABT1Q9ULW3 272 aaKnown RBP26.96■■□□□ 1.91
APP-215ENST00000474136 NPC1L1Q9UHC9 1359 aa26.96■■□□□ 1.91
APP-215ENST00000474136 ALDH1B1P30837 517 aa26.95■■□□□ 1.91
APP-215ENST00000474136 FMR1Q06787 632 aaKnown RBP eCLIP26.95■■□□□ 1.91
APP-215ENST00000474136 DCTN1Q14203 1278 aa26.95■■□□□ 1.91
APP-215ENST00000474136 ABHD8Q96I13 439 aa26.94■■□□□ 1.9
APP-215ENST00000474136 GJA3Q9Y6H8 435 aa26.94■■□□□ 1.9
APP-215ENST00000474136 SNED1Q8TER0 1413 aa26.94■■□□□ 1.9
APP-215ENST00000474136 GTF2E1P29083 439 aaPredicted RBP26.93■■□□□ 1.9
APP-215ENST00000474136 ABCC12Q96J65 1359 aa26.93■■□□□ 1.9
APP-215ENST00000474136 COL4A5P29400 1685 aa26.93■■□□□ 1.9
APP-215ENST00000474136 RGL2O15211 777 aa26.92■■□□□ 1.9
APP-215ENST00000474136 SLC51AQ86UW1 340 aa26.92■■□□□ 1.9
APP-215ENST00000474136 NUTM1Q86Y26 1132 aa26.92■■□□□ 1.9
APP-215ENST00000474136 JDP2Q8WYK2 163 aa26.92■■□□□ 1.9
APP-215ENST00000474136 RTF1Q92541 710 aaKnown RBP26.92■■□□□ 1.9
APP-215ENST00000474136 PSMD1Q99460 953 aa26.92■■□□□ 1.9
APP-215ENST00000474136 DDX21Q9NR30 783 aaKnown RBP eCLIP26.92■■□□□ 1.9
APP-215ENST00000474136 MAP2K1Q02750 393 aaPredicted RBP26.91■■□□□ 1.9
APP-215ENST00000474136 EIF6P56537 245 aaKnown RBP26.9■■□□□ 1.9
APP-215ENST00000474136 CRY2Q49AN0 593 aa26.9■■□□□ 1.9
APP-215ENST00000474136 NGEFQ8N5V2 710 aa26.9■■□□□ 1.9
APP-215ENST00000474136 EPS15P42566 896 aa26.89■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms