RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 GPR37O15354 613 aa9.82□□□□□ -0.84
CCDC93-207ENST00000474006 EXOSC9Q06265 439 aaKnown RBP9.82□□□□□ -0.84
CCDC93-207ENST00000474006 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
CCDC93-207ENST00000474006 ATG3Q9NT62 314 aa9.82□□□□□ -0.84
CCDC93-207ENST00000474006 ASAP1Q9ULH1 1129 aa9.82□□□□□ -0.84
CCDC93-207ENST00000474006 FANCIQ9NVI1 1328 aa9.82□□□□□ -0.84
CCDC93-207ENST00000474006 GRXCR2A6NFK2 248 aa9.81□□□□□ -0.84
CCDC93-207ENST00000474006 ELL2O00472 640 aaPredicted RBP9.81□□□□□ -0.84
CCDC93-207ENST00000474006 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
CCDC93-207ENST00000474006 TTC5Q8N0Z6 440 aa9.81□□□□□ -0.84
CCDC93-207ENST00000474006 C8orf58Q8NAV2 365 aa9.81□□□□□ -0.84
CCDC93-207ENST00000474006 RGS12O14924 1447 aa9.81□□□□□ -0.84
CCDC93-207ENST00000474006 PTCD1O75127 700 aaKnown RBP9.8□□□□□ -0.84
CCDC93-207ENST00000474006 TRIM37O94972 964 aa9.8□□□□□ -0.84
CCDC93-207ENST00000474006 OSBPP22059 807 aa9.8□□□□□ -0.84
CCDC93-207ENST00000474006 KRT24Q2M2I5 525 aa9.8□□□□□ -0.84
CCDC93-207ENST00000474006 TSPYL6Q8N831 410 aa9.8□□□□□ -0.84
CCDC93-207ENST00000474006 ZNF496Q96IT1 587 aaPredicted RBP9.8□□□□□ -0.84
CCDC93-207ENST00000474006 BCL9O00512 1426 aa9.8□□□□□ -0.84
CCDC93-207ENST00000474006 EVI5O60447 810 aa9.79□□□□□ -0.84
CCDC93-207ENST00000474006 VAMP4O75379 141 aa9.79□□□□□ -0.84
CCDC93-207ENST00000474006 KRI1Q8N9T8 703 aaKnown RBP9.79□□□□□ -0.84
CCDC93-207ENST00000474006 THSD7AQ9UPZ6 1657 aa9.79□□□□□ -0.84
CCDC93-207ENST00000474006 PARP4Q9UKK3 1724 aaKnown RBP9.79□□□□□ -0.84
CCDC93-207ENST00000474006 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
CCDC93-207ENST00000474006 TWISTNBQ3B726 338 aaPredicted RBP9.78□□□□□ -0.84
CCDC93-207ENST00000474006 SMARCC1Q92922 1105 aaPredicted RBP9.78□□□□□ -0.84
CCDC93-207ENST00000474006 FMNL2Q96PY5 1086 aa9.78□□□□□ -0.84
CCDC93-207ENST00000474006 GTF3C3Q9Y5Q9 886 aa9.78□□□□□ -0.84
CCDC93-207ENST00000474006 PKD1L3Q7Z443 1732 aa9.78□□□□□ -0.84
CCDC93-207ENST00000474006 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
CCDC93-207ENST00000474006 CENPBP07199 599 aaPredicted RBP9.77□□□□□ -0.85
CCDC93-207ENST00000474006 SNRPA1P09661 255 aaKnown RBP9.77□□□□□ -0.85
CCDC93-207ENST00000474006 ANO8Q9HCE9 1232 aaPredicted RBP9.77□□□□□ -0.85
CCDC93-207ENST00000474006 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.77□□□□□ -0.85
CCDC93-207ENST00000474006 LRRC37A3O60309 1634 aa9.76□□□□□ -0.85
CCDC93-207ENST00000474006 APBA3O96018 575 aa9.76□□□□□ -0.85
CCDC93-207ENST00000474006 CT47B1P0C2W7 299 aaPredicted RBP9.76□□□□□ -0.85
CCDC93-207ENST00000474006 EIF2S2P20042 333 aaKnown RBP9.76□□□□□ -0.85
CCDC93-207ENST00000474006 SLC4A9Q96Q91 983 aa9.76□□□□□ -0.85
CCDC93-207ENST00000474006 USP16Q9Y5T5 823 aa9.76□□□□□ -0.85
CCDC93-207ENST00000474006 HEG1Q9ULI3 1381 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 LOC102724428A0A0B4J2F2 783 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 ATP6V1AP38606 617 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 SIK1P57059 783 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 NECTIN2Q92692 538 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 DDX12PQ92771 950 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 TEX13AQ9BXU3 409 aaPredicted RBP9.75□□□□□ -0.85
CCDC93-207ENST00000474006 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
CCDC93-207ENST00000474006 MRC1P22897 1456 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 TCERG1O14776 1098 aaKnown RBP9.74□□□□□ -0.85
CCDC93-207ENST00000474006 PLSCR1O15162 318 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 HOXB7P09629 217 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 RARSP54136 660 aaKnown RBP9.74□□□□□ -0.85
CCDC93-207ENST00000474006 KCNQ4P56696 695 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 DNAJC10Q8IXB1 793 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 SOS1Q07889 1333 aaPredicted RBP9.74□□□□□ -0.85
CCDC93-207ENST00000474006 PALLDQ8WX93 1383 aa9.74□□□□□ -0.85
CCDC93-207ENST00000474006 TRIM66O15016 1216 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 BCAR3O75815 825 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 STARD3NLO95772 234 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 ITPK1Q13572 414 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 HDGFL1Q5TGJ6 251 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 CCDC30Q5VVM6 783 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 SSH1Q8WYL5 1049 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 ZNF428Q96B54 188 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 CHMP4AQ9BY43 222 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 ADAMTS7Q9UKP4 1686 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 SHANK3Q9BYB0 1731 aa9.73□□□□□ -0.85
CCDC93-207ENST00000474006 A1BGP04217 495 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 CYP19A1P11511 503 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-207ENST00000474006 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 HIC1Q14526 733 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 ALDH1L2Q3SY69 923 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 ERICH6Q7L0X2 663 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 MRPL50Q8N5N7 158 aaKnown RBP9.72□□□□□ -0.85
CCDC93-207ENST00000474006 BCL2L13Q9BXK5 485 aa9.72□□□□□ -0.85
CCDC93-207ENST00000474006 CCNL1Q9UK58 526 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-207ENST00000474006 GNPATO15228 680 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
CCDC93-207ENST00000474006 TXNRD1Q16881 649 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 ILDR2Q71H61 639 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 CCDC125Q86Z20 511 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 LRRC4BQ9NT99 713 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
CCDC93-207ENST00000474006 DAXXQ9UER7 740 aaPredicted RBP9.71□□□□□ -0.86
CCDC93-207ENST00000474006 WNK3Q9BYP7 1800 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 DLG5Q8TDM6 1919 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 NBPF26B4DH59 902 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 ANXA1P04083 346 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 PIP4K2AP48426 406 aaPredicted RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 PROSER3Q2NL68 480 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 SLC27A3Q5K4L6 730 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 NBPF10Q6P3W6 841 aaKnown RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 INTS5Q6P9B9 1019 aaKnown RBP9.7□□□□□ -0.86
CCDC93-207ENST00000474006 NBPF15Q8N660 670 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 LINC00116Q8NCU8 138 aa9.7□□□□□ -0.86
CCDC93-207ENST00000474006 CAMKK2Q96RR4 588 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms