RNA–Protein interactions for RNA: ENST00000473667.5

PDZD11-203, Transcript of PDZ domain containing 11, humanhuman

TSL 4

Gene PDZD11, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-203ENST00000473667 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
PDZD11-203ENST00000473667 CCDC88AQ3V6T2 1871 aa13.4□□□□□ -0.26
PDZD11-203ENST00000473667 DDNO94850 711 aaPredicted RBP13.39□□□□□ -0.27
PDZD11-203ENST00000473667 HSPA1AP0DMV8 641 aaKnown RBP13.39□□□□□ -0.27
PDZD11-203ENST00000473667 HSPA1BP0DMV9 641 aaKnown RBP13.39□□□□□ -0.27
PDZD11-203ENST00000473667 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
PDZD11-203ENST00000473667 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
PDZD11-203ENST00000473667 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
PDZD11-203ENST00000473667 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
PDZD11-203ENST00000473667 FER1L6Q2WGJ9 1857 aa13.39□□□□□ -0.27
PDZD11-203ENST00000473667 BCORQ6W2J9 1755 aa13.38□□□□□ -0.27
PDZD11-203ENST00000473667 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
PDZD11-203ENST00000473667 CHADLQ6NUI6 762 aa13.38□□□□□ -0.27
PDZD11-203ENST00000473667 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
PDZD11-203ENST00000473667 CAPN15O75808 1086 aa13.37□□□□□ -0.27
PDZD11-203ENST00000473667 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
PDZD11-203ENST00000473667 RTF1Q92541 710 aaKnown RBP13.37□□□□□ -0.27
PDZD11-203ENST00000473667 NUDCQ9Y266 331 aa13.37□□□□□ -0.27
PDZD11-203ENST00000473667 ZNF652Q9Y2D9 606 aa13.37□□□□□ -0.27
PDZD11-203ENST00000473667 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
PDZD11-203ENST00000473667 POTEIP0CG38 1075 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 POTEJP0CG39 1038 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 MCM10Q7L590 875 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 C7orf43Q8WVR3 580 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 CREBZFQ9NS37 354 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 DICER1Q9UPY3 1922 aaKnown RBP13.36□□□□□ -0.27
PDZD11-203ENST00000473667 SLX4Q8IY92 1834 aa13.36□□□□□ -0.27
PDZD11-203ENST00000473667 ARFGEF2Q9Y6D5 1785 aa13.35□□□□□ -0.27
PDZD11-203ENST00000473667 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
PDZD11-203ENST00000473667 NPR1P16066 1061 aa13.35□□□□□ -0.27
PDZD11-203ENST00000473667 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDZD11-203ENST00000473667 CCDC93Q567U6 631 aa13.35□□□□□ -0.27
PDZD11-203ENST00000473667 TPTE2Q6XPS3 522 aa13.35□□□□□ -0.27
PDZD11-203ENST00000473667 CACNA1SQ13698 1873 aa13.34□□□□□ -0.27
PDZD11-203ENST00000473667 IQCA1LA6NCM1 817 aa13.34□□□□□ -0.27
PDZD11-203ENST00000473667 MKRN1Q9UHC7 482 aaKnown RBP13.34□□□□□ -0.27
PDZD11-203ENST00000473667 NIP7Q9Y221 180 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDZD11-203ENST00000473667 KLRG2A4D1S0 409 aaPredicted RBP13.33□□□□□ -0.28
PDZD11-203ENST00000473667 NBPF26B4DH59 902 aa13.33□□□□□ -0.28
PDZD11-203ENST00000473667 RGL2O15211 777 aa13.33□□□□□ -0.28
PDZD11-203ENST00000473667 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
PDZD11-203ENST00000473667 DCTN1Q14203 1278 aa13.33□□□□□ -0.28
PDZD11-203ENST00000473667 NBPF10Q6P3W6 841 aaKnown RBP13.33□□□□□ -0.28
PDZD11-203ENST00000473667 LDHDQ86WU2 507 aa13.33□□□□□ -0.28
PDZD11-203ENST00000473667 NBPF15Q8N660 670 aa13.33□□□□□ -0.28
PDZD11-203ENST00000473667 L3MBTL3Q96JM7 780 aaPredicted RBP13.33□□□□□ -0.28
PDZD11-203ENST00000473667 TAF1DQ9H5J8 278 aaPredicted RBP13.33□□□□□ -0.28
PDZD11-203ENST00000473667 FAM177BA6PVY3 158 aa13.32□□□□□ -0.28
PDZD11-203ENST00000473667 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
PDZD11-203ENST00000473667 PPP2R1AP30153 589 aa13.32□□□□□ -0.28
PDZD11-203ENST00000473667 ZEB1P37275 1124 aaPredicted RBP13.32□□□□□ -0.28
PDZD11-203ENST00000473667 ZNF277Q9NRM2 450 aaPredicted RBP13.32□□□□□ -0.28
PDZD11-203ENST00000473667 HLFQ16534 295 aa13.31□□□□□ -0.28
PDZD11-203ENST00000473667 OLFM4Q6UX06 510 aa13.31□□□□□ -0.28
PDZD11-203ENST00000473667 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
PDZD11-203ENST00000473667 PASKQ96RG2 1323 aa13.31□□□□□ -0.28
PDZD11-203ENST00000473667 ZNF541Q9H0D2 1346 aa13.31□□□□□ -0.28
PDZD11-203ENST00000473667 GTF2E1P29083 439 aaPredicted RBP13.3□□□□□ -0.28
PDZD11-203ENST00000473667 ALDH1B1P30837 517 aa13.3□□□□□ -0.28
PDZD11-203ENST00000473667 TAF7Q15545 349 aaPredicted RBP13.3□□□□□ -0.28
PDZD11-203ENST00000473667 EAPPQ56P03 285 aaPredicted RBP13.3□□□□□ -0.28
PDZD11-203ENST00000473667 CNTNAP1P78357 1384 aa13.3□□□□□ -0.28
PDZD11-203ENST00000473667 IARSP41252 1262 aaKnown RBP13.29□□□□□ -0.28
PDZD11-203ENST00000473667 SYNE4Q8N205 404 aa13.29□□□□□ -0.28
PDZD11-203ENST00000473667 MIS18AQ9NYP9 233 aa13.29□□□□□ -0.28
PDZD11-203ENST00000473667 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
PDZD11-203ENST00000473667 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
PDZD11-203ENST00000473667 SCN4AP35499 1836 aa13.29□□□□□ -0.28
PDZD11-203ENST00000473667 TMEM88BA6NKF7 163 aa13.28□□□□□ -0.28
PDZD11-203ENST00000473667 FZD9O00144 591 aa13.28□□□□□ -0.28
PDZD11-203ENST00000473667 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
PDZD11-203ENST00000473667 EPHX2P34913 555 aa13.28□□□□□ -0.28
PDZD11-203ENST00000473667 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
PDZD11-203ENST00000473667 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
PDZD11-203ENST00000473667 PNMA8AQ86V59 439 aaPredicted RBP13.27□□□□□ -0.29
PDZD11-203ENST00000473667 NUTM1Q86Y26 1132 aa13.27□□□□□ -0.29
PDZD11-203ENST00000473667 PNISRQ8TF01 805 aaKnown RBP13.27□□□□□ -0.29
PDZD11-203ENST00000473667 RNF123Q5XPI4 1314 aa13.27□□□□□ -0.29
PDZD11-203ENST00000473667 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 ERVV-1B6SEH8 477 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 FOXN1O15353 648 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 NEFMP07197 916 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 VEGFBP49765 207 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 CRY2Q49AN0 593 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 MAP3K15Q6ZN16 1313 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 GPC2Q8N158 579 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 SNED1Q8TER0 1413 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 ABCC12Q96J65 1359 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 PSMD1Q99460 953 aa13.26□□□□□ -0.29
PDZD11-203ENST00000473667 ADAMTSL1Q8N6G6 1762 aa13.25□□□□□ -0.29
PDZD11-203ENST00000473667 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
PDZD11-203ENST00000473667 KIF6Q6ZMV9 814 aa13.25□□□□□ -0.29
PDZD11-203ENST00000473667 JDP2Q8WYK2 163 aa13.25□□□□□ -0.29
PDZD11-203ENST00000473667 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
PDZD11-203ENST00000473667 PCNTO95613 3336 aa13.25□□□□□ -0.29
PDZD11-203ENST00000473667 MYL6BP14649 208 aa13.24□□□□□ -0.29
PDZD11-203ENST00000473667 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
PDZD11-203ENST00000473667 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
PDZD11-203ENST00000473667 TTLL7Q6ZT98 887 aa13.24□□□□□ -0.29
PDZD11-203ENST00000473667 CNTROBQ8N137 903 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms