RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 TATP17735 454 aaPredicted RBP8.62□□□□□ -1.03
BBX-223ENST00000473542 NFATC2IPQ8NCF5 419 aa8.62□□□□□ -1.03
BBX-223ENST00000473542 UCN2Q96RP3 112 aa8.62□□□□□ -1.03
BBX-223ENST00000473542 TRAIPQ9BWF2 469 aa8.62□□□□□ -1.03
BBX-223ENST00000473542 SEMA6BQ9H3T3 888 aa8.62□□□□□ -1.03
BBX-223ENST00000473542 AVENQ9NQS1 362 aaPredicted RBP8.62□□□□□ -1.03
BBX-223ENST00000473542 PALM3A6NDB9 673 aaPredicted RBP8.61□□□□□ -1.03
BBX-223ENST00000473542 EFSO43281 561 aa8.61□□□□□ -1.03
BBX-223ENST00000473542 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
BBX-223ENST00000473542 PRR12Q9ULL5 1215 aa8.61□□□□□ -1.03
BBX-223ENST00000473542 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
BBX-223ENST00000473542 MDFIQ99750 246 aa8.6□□□□□ -1.03
BBX-223ENST00000473542 MARK1Q9P0L2 795 aa8.6□□□□□ -1.03
BBX-223ENST00000473542 GJA3Q9Y6H8 435 aa8.6□□□□□ -1.03
BBX-223ENST00000473542 SAMD5Q5TGI4 173 aa8.59□□□□□ -1.03
BBX-223ENST00000473542 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.59□□□□□ -1.03
BBX-223ENST00000473542 TFIP11Q9UBB9 837 aaKnown RBP8.59□□□□□ -1.03
BBX-223ENST00000473542 ATP9BO43861 1147 aa8.58□□□□□ -1.04
BBX-223ENST00000473542 GATA4P43694 442 aa8.58□□□□□ -1.04
BBX-223ENST00000473542 TBCELQ5QJ74 424 aa8.58□□□□□ -1.04
BBX-223ENST00000473542 SYT9Q86SS6 491 aa8.58□□□□□ -1.04
BBX-223ENST00000473542 MAFBQ9Y5Q3 323 aaPredicted RBP8.58□□□□□ -1.04
BBX-223ENST00000473542 ELOA3CA0A087WX78 387 aaPredicted RBP8.57□□□□□ -1.04
BBX-223ENST00000473542 ELOA3DA6NLF2 546 aaPredicted RBP8.57□□□□□ -1.04
BBX-223ENST00000473542 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 SPATA31C1P0DKV0 1188 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 ELOA3BQ3SY89 546 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 SH3PXD2AQ5TCZ1 1133 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 LRRC69Q6ZNQ3 347 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 ELOA3Q8NG57 546 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 ZNF358Q9NW07 568 aa8.57□□□□□ -1.04
BBX-223ENST00000473542 SCHIP1Q9P0W5 487 aaPredicted RBP8.57□□□□□ -1.04
BBX-223ENST00000473542 COL9A3Q14050 684 aaPredicted RBP8.56□□□□□ -1.04
BBX-223ENST00000473542 RSPO4Q2I0M5 234 aaPredicted RBP8.56□□□□□ -1.04
BBX-223ENST00000473542 FOXD4L6Q3SYB3 417 aaPredicted RBP8.56□□□□□ -1.04
BBX-223ENST00000473542 FOXD4L3Q6VB84 417 aaPredicted RBP8.56□□□□□ -1.04
BBX-223ENST00000473542 C8orf86Q6ZUL3 223 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 RETREG2Q8NC44 543 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 L3MBTL2Q969R5 705 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 SLC30A3Q99726 388 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 USTQ9Y2C2 406 aa8.56□□□□□ -1.04
BBX-223ENST00000473542 SKIP12755 728 aa8.55□□□□□ -1.04
BBX-223ENST00000473542 LMOD1P29536 600 aaPredicted RBP8.55□□□□□ -1.04
BBX-223ENST00000473542 EPHA4P54764 986 aa8.55□□□□□ -1.04
BBX-223ENST00000473542 GTF2IP78347 998 aa8.55□□□□□ -1.04
BBX-223ENST00000473542 SFSWAPQ12872 951 aaKnown RBP8.55□□□□□ -1.04
BBX-223ENST00000473542 PLEKHM2Q8IWE5 1019 aa8.55□□□□□ -1.04
BBX-223ENST00000473542 STARD13Q9Y3M8 1113 aa8.55□□□□□ -1.04
BBX-223ENST00000473542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.54□□□□□ -1.04
BBX-223ENST00000473542 EML1O00423 815 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 LZTS3O60299 673 aaPredicted RBP8.54□□□□□ -1.04
BBX-223ENST00000473542 ATG7O95352 703 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 NOS2P35228 1153 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 LAMC2Q13753 1193 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 EML3Q32P44 896 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 ZMYM1Q5SVZ6 1142 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 PSMG3-AS1Q96PY0 264 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
BBX-223ENST00000473542 RFX1P22670 979 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 NCOA4Q13772 614 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 TEAD4Q15561 434 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 NKAPLQ5M9Q1 402 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 RAB44Q7Z6P3 723 aaPredicted RBP8.53□□□□□ -1.04
BBX-223ENST00000473542 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 TNS4Q8IZW8 715 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
BBX-223ENST00000473542 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.52□□□□□ -1.05
BBX-223ENST00000473542 M0R082 166 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 BACH1O14867 736 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 ALBP02768 609 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 PSME1Q06323 249 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 ZNF417Q8TAU3 575 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 ZNF587Q96SQ5 575 aaPredicted RBP8.52□□□□□ -1.05
BBX-223ENST00000473542 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 NOD1Q9Y239 953 aa8.52□□□□□ -1.05
BBX-223ENST00000473542 ADARB2-AS1A8MUL3 147 aa8.51□□□□□ -1.05
BBX-223ENST00000473542 SIN3BO75182 1162 aa8.51□□□□□ -1.05
BBX-223ENST00000473542 ALAS2P22557 587 aa8.51□□□□□ -1.05
BBX-223ENST00000473542 TRIM26Q12899 539 aaPredicted RBP8.51□□□□□ -1.05
BBX-223ENST00000473542 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
BBX-223ENST00000473542 ZBTB7CA1YPR0 619 aa8.5□□□□□ -1.05
BBX-223ENST00000473542 ELOAQ14241 798 aaKnown RBP8.5□□□□□ -1.05
BBX-223ENST00000473542 KANK4Q5T7N3 995 aaPredicted RBP8.5□□□□□ -1.05
BBX-223ENST00000473542 VRTNQ9H8Y1 702 aa8.5□□□□□ -1.05
BBX-223ENST00000473542 KIAA1024Q9UPX6 916 aa8.5□□□□□ -1.05
BBX-223ENST00000473542 USP17L3A6NCW0 530 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 USP17L4A6NCW7 530 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 GRIK4Q16099 956 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 PRRT3Q5FWE3 981 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 USP17L2Q6R6M4 530 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 USP17L1Q7RTZ2 530 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 MICALL1Q8N3F8 863 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 TNFRSF25Q93038 417 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
BBX-223ENST00000473542 KRTAP9-6A0A140TA67 174 aa8.48□□□□□ -1.05
BBX-223ENST00000473542 PATL2C9JE40 543 aaKnown RBP8.48□□□□□ -1.05
BBX-223ENST00000473542 NID1P14543 1247 aa8.48□□□□□ -1.05
BBX-223ENST00000473542 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms