RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 SPINK5Q9NQ38 1064 aaPredicted RBP22.91■■□□□ 1.26
RPUSD3-214ENST00000473522 ANXA1P04083 346 aa22.9■■□□□ 1.26
RPUSD3-214ENST00000473522 COPS6Q7L5N1 327 aa22.9■■□□□ 1.26
RPUSD3-214ENST00000473522 TSPYL6Q8N831 410 aa22.9■■□□□ 1.26
RPUSD3-214ENST00000473522 CHPF2Q9P2E5 772 aa22.9■■□□□ 1.26
RPUSD3-214ENST00000473522 C4AP0C0L4 1744 aa22.89■■□□□ 1.26
RPUSD3-214ENST00000473522 DCAF8L1A6NGE4 600 aa22.89■■□□□ 1.25
RPUSD3-214ENST00000473522 KIF6Q6ZMV9 814 aa22.89■■□□□ 1.25
RPUSD3-214ENST00000473522 C10orf71Q711Q0 1435 aa22.89■■□□□ 1.25
RPUSD3-214ENST00000473522 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
RPUSD3-214ENST00000473522 FANCIQ9NVI1 1328 aa22.87■■□□□ 1.25
RPUSD3-214ENST00000473522 GOLGA2Q08379 1002 aa22.87■■□□□ 1.25
RPUSD3-214ENST00000473522 GIGYF2Q6Y7W6 1299 aaKnown RBP22.87■■□□□ 1.25
RPUSD3-214ENST00000473522 XAGE3Q8WTP9 111 aa22.87■■□□□ 1.25
RPUSD3-214ENST00000473522 CARMIL3Q8ND23 1372 aa22.87■■□□□ 1.25
RPUSD3-214ENST00000473522 KCNA3P22001 575 aa22.86■■□□□ 1.25
RPUSD3-214ENST00000473522 CCDC30Q5VVM6 783 aa22.86■■□□□ 1.25
RPUSD3-214ENST00000473522 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
RPUSD3-214ENST00000473522 NIP7Q9Y221 180 aaKnown RBP eCLIP22.86■■□□□ 1.25
RPUSD3-214ENST00000473522 A0A0G2JLW4 131 aa22.85■■□□□ 1.25
RPUSD3-214ENST00000473522 TWISTNBQ3B726 338 aaPredicted RBP22.85■■□□□ 1.25
RPUSD3-214ENST00000473522 PRR5LQ6MZQ0 368 aa22.85■■□□□ 1.25
RPUSD3-214ENST00000473522 ZNF34Q8IZ26 560 aa22.85■■□□□ 1.25
RPUSD3-214ENST00000473522 ZBTB3Q9H5J0 574 aa22.85■■□□□ 1.25
RPUSD3-214ENST00000473522 VAMP4O75379 141 aa22.84■■□□□ 1.25
RPUSD3-214ENST00000473522 DPEP1P16444 411 aa22.84■■□□□ 1.25
RPUSD3-214ENST00000473522 TPTE2Q6XPS3 522 aa22.84■■□□□ 1.25
RPUSD3-214ENST00000473522 BRIP1Q9BX63 1249 aa22.84■■□□□ 1.25
RPUSD3-214ENST00000473522 AIMP1Q12904 312 aaKnown RBP22.83■■□□□ 1.25
RPUSD3-214ENST00000473522 GPR162Q16538 588 aa22.83■■□□□ 1.25
RPUSD3-214ENST00000473522 ANKRD13DQ6ZTN6 518 aa22.83■■□□□ 1.25
RPUSD3-214ENST00000473522 EXOSC9Q06265 439 aaKnown RBP22.82■■□□□ 1.24
RPUSD3-214ENST00000473522 PLBD2Q8NHP8 589 aa22.82■■□□□ 1.24
RPUSD3-214ENST00000473522 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 PXDNLA1KZ92 1463 aa22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 NBPF5PQ86XG9 351 aaPredicted RBP22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 CNBD1Q8NA66 436 aa22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 PDZRN3Q9UPQ7 1066 aa22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 ATP10DQ9P241 1426 aa22.81■■□□□ 1.24
RPUSD3-214ENST00000473522 E9PSI1 815 aa22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 GRIN3BO60391 1043 aa22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 YBX3P16989 372 aaKnown RBP eCLIP22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 SLFN5Q08AF3 891 aa22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 TCIRG1Q13488 830 aa22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 HSP90AB3PQ58FF7 597 aa22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 PHAXQ9H814 394 aaKnown RBP22.8■■□□□ 1.24
RPUSD3-214ENST00000473522 KLRG2A4D1S0 409 aaPredicted RBP22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 CHRNA5P30532 468 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 PDE6BP35913 854 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 PARP10Q53GL7 1025 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 SUSD4Q5VX71 490 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 TRMT2AQ8IZ69 625 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 PIM2Q9P1W9 311 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 UBN2Q6ZU65 1347 aa22.78■■□□□ 1.24
RPUSD3-214ENST00000473522 ST5P78524 1137 aa22.77■■□□□ 1.24
RPUSD3-214ENST00000473522 NYXQ9GZU5 481 aa22.77■■□□□ 1.24
RPUSD3-214ENST00000473522 SCN7AQ01118 1682 aa22.77■■□□□ 1.24
RPUSD3-214ENST00000473522 H0YIN7 160 aa22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 GPTP24298 496 aa22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 TRIM28Q13263 835 aaKnown RBP22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 CCDC24Q8N4L8 307 aa22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 STK31Q9BXU1 1019 aa22.76■■□□□ 1.23
RPUSD3-214ENST00000473522 PPP1R42Q7Z4L9 355 aa22.75■■□□□ 1.23
RPUSD3-214ENST00000473522 C2CD5Q86YS7 1000 aa22.75■■□□□ 1.23
RPUSD3-214ENST00000473522 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-214ENST00000473522 ISCA1Q9BUE6 129 aa22.75■■□□□ 1.23
RPUSD3-214ENST00000473522 UTRNP46939 3433 aa22.75■■□□□ 1.23
RPUSD3-214ENST00000473522 NLRP10Q86W26 655 aa22.74■■□□□ 1.23
RPUSD3-214ENST00000473522 CDCA7LQ96GN5 454 aa22.74■■□□□ 1.23
RPUSD3-214ENST00000473522 IBTKQ9P2D0 1353 aaPredicted RBP22.74■■□□□ 1.23
RPUSD3-214ENST00000473522 NRXN2Q9P2S2 1712 aa22.74■■□□□ 1.23
RPUSD3-214ENST00000473522 FAM177BA6PVY3 158 aa22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 NPHP1O15259 732 aa22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 NTSR2O95665 410 aa22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 DALRD3Q5D0E6 543 aaKnown RBP22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 SLC10A5Q5PT55 438 aa22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 GOLGB1Q14789 3259 aaKnown RBP22.73■■□□□ 1.23
RPUSD3-214ENST00000473522 TCERG1O14776 1098 aaKnown RBP22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 SRGNP10124 158 aa22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 GTF2E1P29083 439 aaPredicted RBP22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 UTP14AQ9BVJ6 771 aaKnown RBP22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 BCS1LQ9Y276 419 aa22.72■■□□□ 1.23
RPUSD3-214ENST00000473522 DDX58O95786 925 aaKnown RBP22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 ERFEQ4G0M1 354 aa22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 G2E3Q7L622 706 aa22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 WWC3Q9ULE0 1092 aa22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 BCORQ6W2J9 1755 aa22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
RPUSD3-214ENST00000473522 KSR2Q6VAB6 950 aa22.7■■□□□ 1.22
RPUSD3-214ENST00000473522 NUTM1Q86Y26 1132 aa22.7■■□□□ 1.22
RPUSD3-214ENST00000473522 TTLL6Q8N841 843 aa22.7■■□□□ 1.22
RPUSD3-214ENST00000473522 RNF123Q5XPI4 1314 aa22.7■■□□□ 1.22
RPUSD3-214ENST00000473522 STYK1Q6J9G0 422 aa22.69■■□□□ 1.22
RPUSD3-214ENST00000473522 MASTLQ96GX5 879 aa22.69■■□□□ 1.22
RPUSD3-214ENST00000473522 METTL22Q9BUU2 404 aaPredicted RBP22.69■■□□□ 1.22
RPUSD3-214ENST00000473522 PI4KAP2A4QPH2 592 aa22.68■■□□□ 1.22
RPUSD3-214ENST00000473522 FLIIQ13045 1269 aa22.68■■□□□ 1.22
RPUSD3-214ENST00000473522 CRY2Q49AN0 593 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms