RNA–Protein interactions for RNA: ENST00000473517.1

SATB2-208, Transcript of SATB homeobox 2, humanhuman

TSL 3

Gene SATB2, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-208ENST00000473517 C7orf43Q8WVR3 580 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 EYA1Q99502 592 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 GGNBP2Q9H3C7 697 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 ZNF277Q9NRM2 450 aaPredicted RBP11.5□□□□□ -0.57
SATB2-208ENST00000473517 HPS5Q9UPZ3 1129 aa11.5□□□□□ -0.57
SATB2-208ENST00000473517 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
SATB2-208ENST00000473517 ADAMTS7Q9UKP4 1686 aa11.49□□□□□ -0.57
SATB2-208ENST00000473517 SRGNP10124 158 aa11.49□□□□□ -0.57
SATB2-208ENST00000473517 L3MBTL2Q969R5 705 aa11.49□□□□□ -0.57
SATB2-208ENST00000473517 MASTLQ96GX5 879 aa11.49□□□□□ -0.57
SATB2-208ENST00000473517 PKN2Q16513 984 aaKnown RBP11.48□□□□□ -0.57
SATB2-208ENST00000473517 PRR5LQ6MZQ0 368 aa11.48□□□□□ -0.57
SATB2-208ENST00000473517 SLC17A8Q8NDX2 589 aa11.48□□□□□ -0.57
SATB2-208ENST00000473517 ZIC5Q96T25 663 aa11.48□□□□□ -0.57
SATB2-208ENST00000473517 COL15A1P39059 1388 aa11.48□□□□□ -0.57
SATB2-208ENST00000473517 DNAJC10Q8IXB1 793 aa11.47□□□□□ -0.57
SATB2-208ENST00000473517 RTKN2Q8IZC4 609 aa11.47□□□□□ -0.57
SATB2-208ENST00000473517 CYP19A1P11511 503 aaPredicted RBP11.46□□□□□ -0.57
SATB2-208ENST00000473517 IARSP41252 1262 aaKnown RBP11.46□□□□□ -0.57
SATB2-208ENST00000473517 EPS15P42566 896 aa11.46□□□□□ -0.57
SATB2-208ENST00000473517 EIF6P56537 245 aaKnown RBP11.46□□□□□ -0.57
SATB2-208ENST00000473517 NFATC2IPQ8NCF5 419 aa11.46□□□□□ -0.57
SATB2-208ENST00000473517 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
SATB2-208ENST00000473517 RNF186Q9NXI6 227 aa11.46□□□□□ -0.57
SATB2-208ENST00000473517 EMILIN1Q9Y6C2 1016 aa11.46□□□□□ -0.57
SATB2-208ENST00000473517 WASHC2AQ641Q2 1341 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 ST20-MTHFSA0A0A6YYL1 179 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 TRPA1O75762 1119 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 MTHFSP49914 203 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 SCNN1DP51172 638 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 CCDC24Q8N4L8 307 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
SATB2-208ENST00000473517 A0A087WZG4 1122 aa11.44□□□□□ -0.58
SATB2-208ENST00000473517 PLEKHO1Q53GL0 409 aaPredicted RBP11.44□□□□□ -0.58
SATB2-208ENST00000473517 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
SATB2-208ENST00000473517 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
SATB2-208ENST00000473517 RNF216Q9NWF9 866 aaPredicted RBP11.44□□□□□ -0.58
SATB2-208ENST00000473517 SLX4Q8IY92 1834 aa11.44□□□□□ -0.58
SATB2-208ENST00000473517 TRPM7Q96QT4 1865 aa11.43□□□□□ -0.58
SATB2-208ENST00000473517 PPM1GO15355 546 aaPredicted RBP11.43□□□□□ -0.58
SATB2-208ENST00000473517 ST5P78524 1137 aa11.43□□□□□ -0.58
SATB2-208ENST00000473517 CNBD1Q8NA66 436 aa11.43□□□□□ -0.58
SATB2-208ENST00000473517 A0A0C4DFX4 3053 aa11.43□□□□□ -0.58
SATB2-208ENST00000473517 CUL9Q8IWT3 2517 aa11.42□□□□□ -0.58
SATB2-208ENST00000473517 FAM155AB1AL88 458 aaPredicted RBP11.42□□□□□ -0.58
SATB2-208ENST00000473517 HUNKP57058 714 aa11.42□□□□□ -0.58
SATB2-208ENST00000473517 KIF23Q02241 960 aaPredicted RBP11.42□□□□□ -0.58
SATB2-208ENST00000473517 AMOTQ4VCS5 1084 aa11.42□□□□□ -0.58
SATB2-208ENST00000473517 ZNF530Q6P9A1 599 aaPredicted RBP11.42□□□□□ -0.58
SATB2-208ENST00000473517 CCDC102AQ96A19 550 aa11.42□□□□□ -0.58
SATB2-208ENST00000473517 GLIS2Q9BZE0 524 aaPredicted RBP11.42□□□□□ -0.58
SATB2-208ENST00000473517 ADARB2Q9NS39 739 aaKnown RBP11.42□□□□□ -0.58
SATB2-208ENST00000473517 PGAP2Q9UHJ9 254 aa11.42□□□□□ -0.58
SATB2-208ENST00000473517 SZT2Q5T011 3432 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 TJP1Q07157 1748 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 MKI67P46013 3256 aaKnown RBP11.41□□□□□ -0.58
SATB2-208ENST00000473517 ANKRD31Q8N7Z5 1873 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 NPHP1O15259 732 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 NPR1P16066 1061 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
SATB2-208ENST00000473517 PSMD1Q99460 953 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 ZNF408Q9H9D4 720 aa11.41□□□□□ -0.58
SATB2-208ENST00000473517 RGMBQ6NW40 437 aa11.4□□□□□ -0.58
SATB2-208ENST00000473517 CDC37L1Q7L3B6 337 aa11.4□□□□□ -0.58
SATB2-208ENST00000473517 ZC3H15Q8WU90 426 aaKnown RBP11.4□□□□□ -0.58
SATB2-208ENST00000473517 SETDB2Q96T68 719 aa11.4□□□□□ -0.58
SATB2-208ENST00000473517 COLQQ9Y215 455 aaPredicted RBP11.4□□□□□ -0.58
SATB2-208ENST00000473517 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.58
SATB2-208ENST00000473517 KLRG2A4D1S0 409 aaPredicted RBP11.39□□□□□ -0.59
SATB2-208ENST00000473517 SLC24A1O60721 1099 aa11.39□□□□□ -0.59
SATB2-208ENST00000473517 CANXP27824 592 aaKnown RBP11.39□□□□□ -0.59
SATB2-208ENST00000473517 C1orf141Q5JVX7 400 aa11.39□□□□□ -0.59
SATB2-208ENST00000473517 OLFM4Q6UX06 510 aa11.39□□□□□ -0.59
SATB2-208ENST00000473517 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
SATB2-208ENST00000473517 VSIG10Q8N0Z9 540 aa11.39□□□□□ -0.59
SATB2-208ENST00000473517 HDAC9Q9UKV0 1011 aa11.39□□□□□ -0.59
SATB2-208ENST00000473517 PITPNM2Q9BZ72 1349 aa11.38□□□□□ -0.59
SATB2-208ENST00000473517 KCNA4P22459 653 aa11.38□□□□□ -0.59
SATB2-208ENST00000473517 ALDH1B1P30837 517 aa11.38□□□□□ -0.59
SATB2-208ENST00000473517 FBXO46Q6PJ61 603 aaPredicted RBP11.38□□□□□ -0.59
SATB2-208ENST00000473517 CSRNP1Q96S65 589 aa11.38□□□□□ -0.59
SATB2-208ENST00000473517 GPRC5DQ9NZD1 345 aa11.38□□□□□ -0.59
SATB2-208ENST00000473517 MNX1P50219 401 aaPredicted RBP11.37□□□□□ -0.59
SATB2-208ENST00000473517 EIF4A2Q14240 407 aaKnown RBP11.37□□□□□ -0.59
SATB2-208ENST00000473517 CC2D2BQ6DHV5 1058 aa11.37□□□□□ -0.59
SATB2-208ENST00000473517 STARD3NLO95772 234 aa11.36□□□□□ -0.59
SATB2-208ENST00000473517 ZNF157P51786 506 aaPredicted RBP11.36□□□□□ -0.59
SATB2-208ENST00000473517 HOXD11P31277 338 aaPredicted RBP11.35□□□□□ -0.59
SATB2-208ENST00000473517 GRIPAP1Q4V328 841 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 INTS3Q68E01 1043 aaKnown RBP11.35□□□□□ -0.59
SATB2-208ENST00000473517 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 C2orf69Q8N8R5 385 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 ZNF296Q8WUU4 475 aaPredicted RBP11.35□□□□□ -0.59
SATB2-208ENST00000473517 TESK2Q96S53 571 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 SLC52A2Q9HAB3 445 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 TBC1D2BQ9UPU7 963 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 ARFGEF2Q9Y6D5 1785 aa11.35□□□□□ -0.59
SATB2-208ENST00000473517 NOM1Q5C9Z4 860 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms