RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 RIPOR1Q6ZS17 1223 aa11.95□□□□□ -0.5
A1CF-209ENST00000473480 GMCL1Q96IK5 515 aa11.95□□□□□ -0.5
A1CF-209ENST00000473480 ARID3CA6NKF2 412 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 FAM196BA6NMK8 535 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 M0R2N6 131 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 WIPF1O43516 503 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 F11P03951 625 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 MLECQ14165 292 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 SV2AQ7L0J3 742 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 VWA5B2Q8N398 1253 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 CCDC97Q96F63 343 aaPredicted RBP11.94□□□□□ -0.5
A1CF-209ENST00000473480 SCHIP1Q9P0W5 487 aaPredicted RBP11.94□□□□□ -0.5
A1CF-209ENST00000473480 IQSEC3Q9UPP2 1182 aaPredicted RBP11.94□□□□□ -0.5
A1CF-209ENST00000473480 FER1L4A9Z1Z3 1794 aa11.94□□□□□ -0.5
A1CF-209ENST00000473480 H7C1W4 665 aa11.93□□□□□ -0.5
A1CF-209ENST00000473480 PIP4K2BP78356 416 aa11.93□□□□□ -0.5
A1CF-209ENST00000473480 PTK7Q13308 1070 aa11.93□□□□□ -0.5
A1CF-209ENST00000473480 CRTC2Q53ET0 693 aaPredicted RBP11.93□□□□□ -0.5
A1CF-209ENST00000473480 TRIM22Q8IYM9 498 aa11.93□□□□□ -0.5
A1CF-209ENST00000473480 CUEDC1Q9NWM3 386 aaPredicted RBP11.93□□□□□ -0.5
A1CF-209ENST00000473480 SERPINA10Q9UK55 444 aa11.93□□□□□ -0.5
A1CF-209ENST00000473480 DKK1O94907 266 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 RFX1P22670 979 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 PLA2G4AP47712 749 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 EPHA4P54764 986 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 TNS4Q8IZW8 715 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 BIVM-ERCC5R4GMW8 1640 aa11.92□□□□□ -0.5
A1CF-209ENST00000473480 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
A1CF-209ENST00000473480 ARHGEF40Q8TER5 1519 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L15C9J2P7 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L10C9JJH3 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L13C9JLJ4 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L12C9JPN9 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L11C9JVI0 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L21D6R901 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L18D6R9N7 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L22D6RA61 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L17D6RBQ6 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L19D6RCP7 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L20D6RJB6 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 CEBPAP49715 358 aaPredicted RBP11.91□□□□□ -0.5
A1CF-209ENST00000473480 SEC13P55735 322 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 USP17L24Q0WX57 530 aa11.91□□□□□ -0.5
A1CF-209ENST00000473480 SFI1A8K8P3 1242 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 TOM1O60784 492 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 FOXK2Q01167 660 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 ZNF295-AS1Q8N0V1 137 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 GPAMQ9HCL2 828 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 CABP1Q9NZU7 370 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 USP3Q9Y6I4 520 aa11.9□□□□□ -0.5
A1CF-209ENST00000473480 AKNAQ7Z591 1439 aa11.89□□□□□ -0.51
A1CF-209ENST00000473480 DBN1Q16643 649 aa11.89□□□□□ -0.51
A1CF-209ENST00000473480 ANKMY2Q8IV38 441 aa11.89□□□□□ -0.51
A1CF-209ENST00000473480 SLC9A9Q8IVB4 645 aa11.89□□□□□ -0.51
A1CF-209ENST00000473480 GPR161Q8N6U8 529 aaKnown RBP11.89□□□□□ -0.51
A1CF-209ENST00000473480 ZNF837Q96EG3 531 aaPredicted RBP11.89□□□□□ -0.51
A1CF-209ENST00000473480 NEO1Q92859 1461 aa11.89□□□□□ -0.51
A1CF-209ENST00000473480 ZNF335Q9H4Z2 1342 aaPredicted RBP11.88□□□□□ -0.51
A1CF-209ENST00000473480 FRMPD1Q5SYB0 1578 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 DISP1Q96F81 1524 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 CSB-PGBD3P0DP91 1061 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 MSX1P28360 303 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 DPYDQ12882 1025 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 NBPF1Q3BBV0 1214 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 FOXR1Q6PIV2 292 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 PGBD3Q8N328 593 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 TSEN2Q8NCE0 465 aaKnown RBP11.88□□□□□ -0.51
A1CF-209ENST00000473480 C1orf216Q8TAB5 229 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 RGS17Q9UGC6 210 aaPredicted RBP11.88□□□□□ -0.51
A1CF-209ENST00000473480 IQGAP2Q13576 1575 aa11.88□□□□□ -0.51
A1CF-209ENST00000473480 AIDAQ96BJ3 306 aa11.87□□□□□ -0.51
A1CF-209ENST00000473480 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
A1CF-209ENST00000473480 LBRQ14739 615 aaKnown RBP11.86□□□□□ -0.51
A1CF-209ENST00000473480 TEAD4Q15561 434 aa11.86□□□□□ -0.51
A1CF-209ENST00000473480 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
A1CF-209ENST00000473480 SRCAPQ6ZRS2 3230 aa11.86□□□□□ -0.51
A1CF-209ENST00000473480 INSM1Q01101 510 aaPredicted RBP11.85□□□□□ -0.51
A1CF-209ENST00000473480 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
A1CF-209ENST00000473480 TSPAN10Q9H1Z9 355 aaPredicted RBP11.85□□□□□ -0.51
A1CF-209ENST00000473480 ZDHHC3Q9NYG2 299 aa11.85□□□□□ -0.51
A1CF-209ENST00000473480 TBCELQ5QJ74 424 aa11.84□□□□□ -0.51
A1CF-209ENST00000473480 CRISPLD1Q9H336 500 aa11.84□□□□□ -0.51
A1CF-209ENST00000473480 RUBCNLQ9H714 662 aa11.84□□□□□ -0.51
A1CF-209ENST00000473480 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
A1CF-209ENST00000473480 NCOA1Q15788 1441 aa11.84□□□□□ -0.51
A1CF-209ENST00000473480 IGF1RP08069 1367 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 TATP17735 454 aaPredicted RBP11.83□□□□□ -0.52
A1CF-209ENST00000473480 NOS2P35228 1153 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
A1CF-209ENST00000473480 EFHC2Q5JST6 749 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 CCDC82Q8N4S0 544 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 ZDHHC1Q8WTX9 485 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 GTPBP3Q969Y2 492 aaKnown RBP11.83□□□□□ -0.52
A1CF-209ENST00000473480 ARXQ96QS3 562 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 HINFPQ9BQA5 517 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 ZNF232Q9UNY5 417 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
A1CF-209ENST00000473480 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.82□□□□□ -0.52
A1CF-209ENST00000473480 SERTM1A2A2V5 107 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms