RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 LY75O60449 1722 aa10.97□□□□□ -0.65
LSAMP-202ENST00000473171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.96□□□□□ -0.65
LSAMP-202ENST00000473171 TRIM6-TRIM34B2RNG4 842 aa10.96□□□□□ -0.65
LSAMP-202ENST00000473171 SEMA3EO15041 775 aa10.96□□□□□ -0.65
LSAMP-202ENST00000473171 RRS1Q15050 365 aaKnown RBP10.96□□□□□ -0.65
LSAMP-202ENST00000473171 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.65
LSAMP-202ENST00000473171 FAM208AQ9UK61 1670 aaKnown RBP10.95□□□□□ -0.66
LSAMP-202ENST00000473171 TOMM70O94826 608 aa10.95□□□□□ -0.66
LSAMP-202ENST00000473171 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
LSAMP-202ENST00000473171 NMRK2Q9NPI5 230 aa10.95□□□□□ -0.66
LSAMP-202ENST00000473171 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
LSAMP-202ENST00000473171 TATP17735 454 aaPredicted RBP10.94□□□□□ -0.66
LSAMP-202ENST00000473171 PACS2Q86VP3 889 aa10.94□□□□□ -0.66
LSAMP-202ENST00000473171 CARD11Q9BXL7 1154 aa10.94□□□□□ -0.66
LSAMP-202ENST00000473171 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
LSAMP-202ENST00000473171 BCS1LQ9Y276 419 aa10.94□□□□□ -0.66
LSAMP-202ENST00000473171 KAT6BQ8WYB5 2073 aa10.94□□□□□ -0.66
LSAMP-202ENST00000473171 PCDH11XQ9BZA7 1347 aa10.93□□□□□ -0.66
LSAMP-202ENST00000473171 PCDH11YQ9BZA8 1340 aa10.93□□□□□ -0.66
LSAMP-202ENST00000473171 LINC00116Q8NCU8 138 aa10.93□□□□□ -0.66
LSAMP-202ENST00000473171 WNT2BQ93097 391 aa10.93□□□□□ -0.66
LSAMP-202ENST00000473171 CDCA7LQ96GN5 454 aa10.93□□□□□ -0.66
LSAMP-202ENST00000473171 C5P01031 1676 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 CYP27B1O15528 508 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 MMP10P09238 476 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 PRSS12P56730 875 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 PXDNLA1KZ92 1463 aa10.92□□□□□ -0.66
LSAMP-202ENST00000473171 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
LSAMP-202ENST00000473171 RTL1A6NKG5 1358 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 A0A0G2JLW4 131 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 GNPATO15228 680 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 SSFA2P28290 1259 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 ARHGAP27Q6ZUM4 889 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 PIGBQ92521 554 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 SMARCC1Q92922 1105 aaPredicted RBP10.91□□□□□ -0.66
LSAMP-202ENST00000473171 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
LSAMP-202ENST00000473171 C4BP0C0L5 1744 aa10.91□□□□□ -0.66
LSAMP-202ENST00000473171 TOGARAM1Q9Y4F4 1720 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 PTPN5P54829 565 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 HSP90AB2PQ58FF8 381 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 LAPTM4BQ86VI4 370 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 TNS4Q8IZW8 715 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 KLRG1Q96E93 195 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 GGNBP2Q9H3C7 697 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 TSKSQ9UJT2 592 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 NSD3Q9BZ95 1437 aa10.9□□□□□ -0.66
LSAMP-202ENST00000473171 CICQ96RK0 1608 aaPredicted RBP10.89□□□□□ -0.67
LSAMP-202ENST00000473171 LOC102724428A0A0B4J2F2 783 aa10.89□□□□□ -0.67
LSAMP-202ENST00000473171 SIK1P57059 783 aa10.89□□□□□ -0.67
LSAMP-202ENST00000473171 ITPK1Q13572 414 aa10.89□□□□□ -0.67
LSAMP-202ENST00000473171 C16orf71Q8IYS4 520 aaPredicted RBP10.89□□□□□ -0.67
LSAMP-202ENST00000473171 ANKK1Q8NFD2 765 aa10.89□□□□□ -0.67
LSAMP-202ENST00000473171 FCHSD2O94868 740 aa10.88□□□□□ -0.67
LSAMP-202ENST00000473171 DPEP1P16444 411 aa10.88□□□□□ -0.67
LSAMP-202ENST00000473171 HMGB2P26583 209 aaKnown RBP10.88□□□□□ -0.67
LSAMP-202ENST00000473171 C9orf131Q5VYM1 1079 aa10.88□□□□□ -0.67
LSAMP-202ENST00000473171 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
LSAMP-202ENST00000473171 RGPD2P0DJD1 1756 aa10.88□□□□□ -0.67
LSAMP-202ENST00000473171 ATP6V1AP38606 617 aa10.87□□□□□ -0.67
LSAMP-202ENST00000473171 ASAP1Q9ULH1 1129 aa10.87□□□□□ -0.67
LSAMP-202ENST00000473171 C10orf71Q711Q0 1435 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 TESPA1A2RU30 521 aaPredicted RBP10.86□□□□□ -0.67
LSAMP-202ENST00000473171 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 FYB1O15117 783 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 TGFB2P61812 414 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 JMYQ8N9B5 988 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
LSAMP-202ENST00000473171 TMOD3Q9NYL9 352 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 INSRP06213 1382 aa10.86□□□□□ -0.67
LSAMP-202ENST00000473171 KCPQ6ZWJ8 1503 aa10.85□□□□□ -0.67
LSAMP-202ENST00000473171 PRELPP51888 382 aa10.85□□□□□ -0.67
LSAMP-202ENST00000473171 PUS7Q96PZ0 661 aaKnown RBP10.85□□□□□ -0.67
LSAMP-202ENST00000473171 RBM27Q9P2N5 1060 aaKnown RBP10.85□□□□□ -0.67
LSAMP-202ENST00000473171 PNMA3Q9UL41 463 aa10.85□□□□□ -0.67
LSAMP-202ENST00000473171 TMF1P82094 1093 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 FSTL1Q12841 308 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 TESK2Q96S53 571 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 RRAGCQ9HB90 399 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 NPDC1Q9NQX5 325 aaPredicted RBP10.84□□□□□ -0.67
LSAMP-202ENST00000473171 CCDC87Q9NVE4 849 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 RNF181Q9P0P0 153 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 RTCBQ9Y3I0 505 aaKnown RBP10.84□□□□□ -0.67
LSAMP-202ENST00000473171 EMILIN1Q9Y6C2 1016 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 FLT4P35916 1363 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 TAF1LQ8IZX4 1826 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 WDR90Q96KV7 1748 aa10.84□□□□□ -0.67
LSAMP-202ENST00000473171 UBR3Q6ZT12 1888 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 ST20-MTHFSA0A0A6YYL1 179 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 SMAPO00193 183 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 PPM1GO15355 546 aaPredicted RBP10.83□□□□□ -0.68
LSAMP-202ENST00000473171 TRAPPC3LQ5T215 181 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 PADI6Q6TGC4 694 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 TATDN2Q93075 761 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 ATG3Q9NT62 314 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 SPG7Q9UQ90 795 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
LSAMP-202ENST00000473171 PLEKHG2Q9H7P9 1386 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms