RNA–Protein interactions for RNA: ENST00000472988.5

SMARCD3-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,654 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-209ENST00000472988 BEND3Q5T5X7 828 aa24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 ANKRD13DQ6ZTN6 518 aa24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 RIC3Q7Z5B4 369 aa24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 CCNL1Q9UK58 526 aaPredicted RBP24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 ZNF330Q9Y3S2 320 aaPredicted RBP24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 BCORQ6W2J9 1755 aa24.23■■□□□ 1.47
SMARCD3-209ENST00000472988 PLBD2Q8NHP8 589 aa24.21■■□□□ 1.47
SMARCD3-209ENST00000472988 MEIS3Q99687 375 aa24.21■■□□□ 1.47
SMARCD3-209ENST00000472988 PCDHB15Q9Y5E8 787 aa24.21■■□□□ 1.47
SMARCD3-209ENST00000472988 IL6STP40189 918 aaPredicted RBP24.21■■□□□ 1.47
SMARCD3-209ENST00000472988 SRCIN1Q9C0H9 1055 aa24.21■■□□□ 1.47
SMARCD3-209ENST00000472988 CNTNAP4Q9C0A0 1308 aa24.2■■□□□ 1.46
SMARCD3-209ENST00000472988 CHMP4BQ9H444 224 aaKnown RBP24.2■■□□□ 1.46
SMARCD3-209ENST00000472988 METTL22Q9BUU2 404 aaPredicted RBP24.19■■□□□ 1.46
SMARCD3-209ENST00000472988 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
SMARCD3-209ENST00000472988 ZBTB3Q9H5J0 574 aa24.18■■□□□ 1.46
SMARCD3-209ENST00000472988 C1orf115Q9H7X2 142 aa24.18■■□□□ 1.46
SMARCD3-209ENST00000472988 UBR3Q6ZT12 1888 aa24.18■■□□□ 1.46
SMARCD3-209ENST00000472988 C4AP0C0L4 1744 aa24.18■■□□□ 1.46
SMARCD3-209ENST00000472988 SCN7AQ01118 1682 aa24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 IGKV5-2P06315 115 aa24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 CWF19L2Q2TBE0 894 aaKnown RBP24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 LINS1Q8NG48 757 aa24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 MYD88Q99836 296 aa24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 LRRC4BQ9NT99 713 aa24.17■■□□□ 1.46
SMARCD3-209ENST00000472988 ALDH1L1O75891 902 aa24.16■■□□□ 1.46
SMARCD3-209ENST00000472988 KIF6Q6ZMV9 814 aa24.16■■□□□ 1.46
SMARCD3-209ENST00000472988 USP44Q9H0E7 712 aa24.15■■□□□ 1.46
SMARCD3-209ENST00000472988 MAP3K15Q6ZN16 1313 aa24.15■■□□□ 1.46
SMARCD3-209ENST00000472988 COL15A1P39059 1388 aa24.15■■□□□ 1.46
SMARCD3-209ENST00000472988 NEXNQ0ZGT2 675 aa24.15■■□□□ 1.46
SMARCD3-209ENST00000472988 IBTKQ9P2D0 1353 aaPredicted RBP24.14■■□□□ 1.45
SMARCD3-209ENST00000472988 RC3H1Q5TC82 1133 aaKnown RBP24.14■■□□□ 1.45
SMARCD3-209ENST00000472988 NEURL1BA8MQ27 555 aa24.13■■□□□ 1.45
SMARCD3-209ENST00000472988 DZIP3Q86Y13 1208 aaKnown RBP24.13■■□□□ 1.45
SMARCD3-209ENST00000472988 KDM2BQ8NHM5 1336 aa24.13■■□□□ 1.45
SMARCD3-209ENST00000472988 APBA3O96018 575 aa24.12■■□□□ 1.45
SMARCD3-209ENST00000472988 SLC27A3Q5K4L6 730 aa24.12■■□□□ 1.45
SMARCD3-209ENST00000472988 TUBGCP6Q96RT7 1819 aa24.12■■□□□ 1.45
SMARCD3-209ENST00000472988 ATP5J2-PTCD1G3V325 749 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 IGHDP01880 384 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 GNAI3P08754 354 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 ARXQ96QS3 562 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 TBC1D2BQ9UPU7 963 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 PLSCR1O15162 318 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 TXNRD1Q16881 649 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 PROM2Q8N271 834 aa24.11■■□□□ 1.45
SMARCD3-209ENST00000472988 NBPF7P0C2Y1 421 aaPredicted RBP24.1■■□□□ 1.45
SMARCD3-209ENST00000472988 HLFQ16534 295 aa24.1■■□□□ 1.45
SMARCD3-209ENST00000472988 NPM2Q86SE8 214 aaKnown RBP24.1■■□□□ 1.45
SMARCD3-209ENST00000472988 GNPATO15228 680 aa24.09■■□□□ 1.45
SMARCD3-209ENST00000472988 GCKRQ14397 625 aa24.09■■□□□ 1.45
SMARCD3-209ENST00000472988 GIGYF2Q6Y7W6 1299 aaKnown RBP24.09■■□□□ 1.45
SMARCD3-209ENST00000472988 RPS6KA4O75676 772 aa24.08■■□□□ 1.45
SMARCD3-209ENST00000472988 UBTFL1P0CB47 393 aaPredicted RBP24.08■■□□□ 1.45
SMARCD3-209ENST00000472988 AMIGO3Q86WK7 504 aa24.08■■□□□ 1.45
SMARCD3-209ENST00000472988 ERVV-1B6SEH8 477 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 GRM8O00222 908 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 GNAI2P04899 355 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 TCIRG1Q13488 830 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 SMIM5Q71RC9 77 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 UTYO14607 1347 aa24.08■■□□□ 1.44
SMARCD3-209ENST00000472988 CAMTA2O94983 1202 aa24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 HDAC1Q13547 482 aaPredicted RBP24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 CENPQQ7L2Z9 268 aaPredicted RBP24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 SIRT2Q8IXJ6 389 aa24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 ISCA1Q9BUE6 129 aa24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 C9orf78Q9NZ63 289 aaPredicted RBP24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 LRRFIP2Q9Y608 721 aaKnown RBP24.07■■□□□ 1.44
SMARCD3-209ENST00000472988 CEP85Q6P2H3 762 aa24.06■■□□□ 1.44
SMARCD3-209ENST00000472988 AK7Q96M32 723 aa24.05■■□□□ 1.44
SMARCD3-209ENST00000472988 ANKRD44Q8N8A2 993 aa24.05■■□□□ 1.44
SMARCD3-209ENST00000472988 RWDD1Q9H446 243 aaPredicted RBP24.05■■□□□ 1.44
SMARCD3-209ENST00000472988 RTCBQ9Y3I0 505 aaKnown RBP24.05■■□□□ 1.44
SMARCD3-209ENST00000472988 A0A087WZG4 1122 aa24.04■■□□□ 1.44
SMARCD3-209ENST00000472988 CWC25Q9NXE8 425 aaPredicted RBP24.04■■□□□ 1.44
SMARCD3-209ENST00000472988 HSP90AB3PQ58FF7 597 aa24.03■■□□□ 1.44
SMARCD3-209ENST00000472988 CCDC191Q8NCU4 936 aa24.03■■□□□ 1.44
SMARCD3-209ENST00000472988 TRIM28Q13263 835 aaKnown RBP24.02■■□□□ 1.44
SMARCD3-209ENST00000472988 RPAP2Q8IXW5 612 aaPredicted RBP24.02■■□□□ 1.44
SMARCD3-209ENST00000472988 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
SMARCD3-209ENST00000472988 MYH3P11055 1940 aa24.01■■□□□ 1.43
SMARCD3-209ENST00000472988 GPTP24298 496 aa24.01■■□□□ 1.43
SMARCD3-209ENST00000472988 CASP7P55210 303 aa24.01■■□□□ 1.43
SMARCD3-209ENST00000472988 JARID2Q92833 1246 aaPredicted RBP24.01■■□□□ 1.43
SMARCD3-209ENST00000472988 SUCLG2Q96I99 432 aa24.01■■□□□ 1.43
SMARCD3-209ENST00000472988 UBN2Q6ZU65 1347 aa24■■□□□ 1.43
SMARCD3-209ENST00000472988 UBE3BQ7Z3V4 1068 aa24■■□□□ 1.43
SMARCD3-209ENST00000472988 KAZALD1Q96I82 304 aa24■■□□□ 1.43
SMARCD3-209ENST00000472988 LAMB2P55268 1798 aa24■■□□□ 1.43
SMARCD3-209ENST00000472988 PHF14O94880 888 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 NLRP10Q86W26 655 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 ZNF34Q8IZ26 560 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 NARFQ9UHQ1 456 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 CASZ1Q86V15 1759 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 H7C1W4 665 aa23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 ARHGEF1Q92888 912 aaKnown RBP23.99■■□□□ 1.43
SMARCD3-209ENST00000472988 BCL2L12Q9HB09 334 aa23.98■■□□□ 1.43
SMARCD3-209ENST00000472988 SRP68Q9UHB9 627 aaKnown RBP23.98■■□□□ 1.43
SMARCD3-209ENST00000472988 DDX60Q8IY21 1712 aaKnown RBP23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms