RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TRMT2AQ8IZ69 625 aaKnown RBP26.77■■□□□ 1.88
TOP3A-204ENST00000472959 VAMP4O75379 141 aa26.76■■□□□ 1.87
TOP3A-204ENST00000472959 TM4SF1P30408 202 aa26.76■■□□□ 1.87
TOP3A-204ENST00000472959 TTLL7Q6ZT98 887 aa26.76■■□□□ 1.87
TOP3A-204ENST00000472959 MAP3K15Q6ZN16 1313 aa26.75■■□□□ 1.87
TOP3A-204ENST00000472959 COPS6Q7L5N1 327 aa26.75■■□□□ 1.87
TOP3A-204ENST00000472959 STK31Q9BXU1 1019 aa26.75■■□□□ 1.87
TOP3A-204ENST00000472959 PARP3Q9Y6F1 533 aa26.75■■□□□ 1.87
TOP3A-204ENST00000472959 NFIXQ14938 502 aa26.74■■□□□ 1.87
TOP3A-204ENST00000472959 XAGE3Q8WTP9 111 aa26.74■■□□□ 1.87
TOP3A-204ENST00000472959 ZBED9Q6R2W3 1325 aa26.73■■□□□ 1.87
TOP3A-204ENST00000472959 DDR1Q08345 913 aa26.71■■□□□ 1.87
TOP3A-204ENST00000472959 AIMP1Q12904 312 aaKnown RBP26.71■■□□□ 1.87
TOP3A-204ENST00000472959 TBC1D9BQ66K14 1250 aa26.71■■□□□ 1.87
TOP3A-204ENST00000472959 POLRMTO00411 1230 aaKnown RBP26.7■■□□□ 1.86
TOP3A-204ENST00000472959 HLFQ16534 295 aa26.7■■□□□ 1.86
TOP3A-204ENST00000472959 SETDB2Q96T68 719 aa26.7■■□□□ 1.86
TOP3A-204ENST00000472959 ZBTB3Q9H5J0 574 aa26.7■■□□□ 1.86
TOP3A-204ENST00000472959 SCN7AQ01118 1682 aa26.7■■□□□ 1.86
TOP3A-204ENST00000472959 BICDL1Q6ZP65 573 aa26.69■■□□□ 1.86
TOP3A-204ENST00000472959 GIGYF2Q6Y7W6 1299 aaKnown RBP26.68■■□□□ 1.86
TOP3A-204ENST00000472959 ANKRD13DQ6ZTN6 518 aa26.68■■□□□ 1.86
TOP3A-204ENST00000472959 ZNF428Q96B54 188 aa26.68■■□□□ 1.86
TOP3A-204ENST00000472959 FHDC1Q9C0D6 1143 aaPredicted RBP26.68■■□□□ 1.86
TOP3A-204ENST00000472959 CD2APQ9Y5K6 639 aa26.68■■□□□ 1.86
TOP3A-204ENST00000472959 SLC4A2P04920 1241 aa26.67■■□□□ 1.86
TOP3A-204ENST00000472959 CT47B1P0C2W7 299 aaPredicted RBP26.67■■□□□ 1.86
TOP3A-204ENST00000472959 PLBD2Q8NHP8 589 aa26.67■■□□□ 1.86
TOP3A-204ENST00000472959 TCERG1O14776 1098 aaKnown RBP26.66■■□□□ 1.86
TOP3A-204ENST00000472959 SERPINB2P05120 415 aa26.66■■□□□ 1.86
TOP3A-204ENST00000472959 PHAXQ9H814 394 aaKnown RBP26.66■■□□□ 1.86
TOP3A-204ENST00000472959 NIP7Q9Y221 180 aaKnown RBP eCLIP26.66■■□□□ 1.86
TOP3A-204ENST00000472959 CARMIL3Q8ND23 1372 aa26.66■■□□□ 1.86
TOP3A-204ENST00000472959 DDX58O95786 925 aaKnown RBP26.65■■□□□ 1.86
TOP3A-204ENST00000472959 HSP90AB3PQ58FF7 597 aa26.65■■□□□ 1.86
TOP3A-204ENST00000472959 SYT17Q9BSW7 474 aa26.65■■□□□ 1.86
TOP3A-204ENST00000472959 BCORQ6W2J9 1755 aa26.65■■□□□ 1.86
TOP3A-204ENST00000472959 ATP10DQ9P241 1426 aa26.65■■□□□ 1.86
TOP3A-204ENST00000472959 KLHL34Q8N239 644 aa26.63■■□□□ 1.85
TOP3A-204ENST00000472959 ZNF34Q8IZ26 560 aa26.62■■□□□ 1.85
TOP3A-204ENST00000472959 TCIRG1Q13488 830 aa26.61■■□□□ 1.85
TOP3A-204ENST00000472959 RIC3Q7Z5B4 369 aa26.61■■□□□ 1.85
TOP3A-204ENST00000472959 NBPF5PQ86XG9 351 aaPredicted RBP26.6■■□□□ 1.85
TOP3A-204ENST00000472959 C10orf71Q711Q0 1435 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 FLIIQ13045 1269 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 PARP10Q53GL7 1025 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 TPTE2Q6XPS3 522 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 G2E3Q7L622 706 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 CNBD1Q8NA66 436 aa26.59■■□□□ 1.85
TOP3A-204ENST00000472959 GPTP24298 496 aa26.58■■□□□ 1.85
TOP3A-204ENST00000472959 ALDH1L2Q3SY69 923 aa26.58■■□□□ 1.85
TOP3A-204ENST00000472959 KSR2Q6VAB6 950 aa26.58■■□□□ 1.85
TOP3A-204ENST00000472959 NPHP1O15259 732 aa26.57■■□□□ 1.84
TOP3A-204ENST00000472959 TGFB2P61812 414 aa26.57■■□□□ 1.84
TOP3A-204ENST00000472959 PRR5LQ6MZQ0 368 aa26.57■■□□□ 1.84
TOP3A-204ENST00000472959 NYXQ9GZU5 481 aa26.57■■□□□ 1.84
TOP3A-204ENST00000472959 UBN2Q6ZU65 1347 aa26.56■■□□□ 1.84
TOP3A-204ENST00000472959 IBTKQ9P2D0 1353 aaPredicted RBP26.56■■□□□ 1.84
TOP3A-204ENST00000472959 PI4KAP2A4QPH2 592 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 ST5P78524 1137 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 TRIM28Q13263 835 aaKnown RBP26.55■■□□□ 1.84
TOP3A-204ENST00000472959 FKBP5Q13451 457 aaPredicted RBP26.55■■□□□ 1.84
TOP3A-204ENST00000472959 PPP1R42Q7Z4L9 355 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 PI4KAP1Q8N8J0 262 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 SSH1Q8WYL5 1049 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 MAP3K2Q9Y2U5 619 aa26.55■■□□□ 1.84
TOP3A-204ENST00000472959 NLRP10Q86W26 655 aa26.54■■□□□ 1.84
TOP3A-204ENST00000472959 MRPL50Q8N5N7 158 aaKnown RBP26.54■■□□□ 1.84
TOP3A-204ENST00000472959 NLGN2Q8NFZ4 835 aa26.54■■□□□ 1.84
TOP3A-204ENST00000472959 ISCA1Q9BUE6 129 aa26.54■■□□□ 1.84
TOP3A-204ENST00000472959 METTL22Q9BUU2 404 aaPredicted RBP26.54■■□□□ 1.84
TOP3A-204ENST00000472959 NUP98P52948 1817 aa26.53■■□□□ 1.84
TOP3A-204ENST00000472959 GTF2E1P29083 439 aaPredicted RBP26.53■■□□□ 1.84
TOP3A-204ENST00000472959 SUSD4Q5VX71 490 aa26.53■■□□□ 1.84
TOP3A-204ENST00000472959 BRIP1Q9BX63 1249 aa26.53■■□□□ 1.84
TOP3A-204ENST00000472959 NRXN2Q9P2S2 1712 aa26.53■■□□□ 1.84
TOP3A-204ENST00000472959 FAM177BA6PVY3 158 aa26.52■■□□□ 1.84
TOP3A-204ENST00000472959 ADCY9O60503 1353 aa26.52■■□□□ 1.84
TOP3A-204ENST00000472959 UTP14AQ9BVJ6 771 aaKnown RBP26.52■■□□□ 1.84
TOP3A-204ENST00000472959 RNF123Q5XPI4 1314 aa26.51■■□□□ 1.83
TOP3A-204ENST00000472959 SMC4Q9NTJ3 1288 aa26.51■■□□□ 1.83
TOP3A-204ENST00000472959 PDZRN3Q9UPQ7 1066 aa26.51■■□□□ 1.83
TOP3A-204ENST00000472959 CACNA1FO60840 1977 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 ATP5J2-PTCD1G3V325 749 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 NTSR2O95665 410 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 PDE6BP35913 854 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 NEXNQ0ZGT2 675 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 MYD88Q99836 296 aa26.5■■□□□ 1.83
TOP3A-204ENST00000472959 RARSP54136 660 aaKnown RBP26.49■■□□□ 1.83
TOP3A-204ENST00000472959 BRPF1P55201 1214 aaPredicted RBP26.49■■□□□ 1.83
TOP3A-204ENST00000472959 DNAAF4Q8WXU2 420 aa26.49■■□□□ 1.83
TOP3A-204ENST00000472959 PTPRCP08575 1304 aa26.48■■□□□ 1.83
TOP3A-204ENST00000472959 CCDC24Q8N4L8 307 aa26.48■■□□□ 1.83
TOP3A-204ENST00000472959 CCDC191Q8NCU4 936 aa26.48■■□□□ 1.83
TOP3A-204ENST00000472959 BCL2L13Q9BXK5 485 aa26.48■■□□□ 1.83
TOP3A-204ENST00000472959 TRMT112Q9UI30 125 aaKnown RBP26.48■■□□□ 1.83
TOP3A-204ENST00000472959 AFDNP55196 1824 aaKnown RBP26.48■■□□□ 1.83
TOP3A-204ENST00000472959 PXDNLA1KZ92 1463 aa26.48■■□□□ 1.83
TOP3A-204ENST00000472959 KIF13BQ9NQT8 1826 aa26.47■■□□□ 1.83
TOP3A-204ENST00000472959 A0A0G2JLW4 131 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms