RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 FLT4P35916 1363 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 C10orf71Q711Q0 1435 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 DYNC1I1O14576 645 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 SNX21Q969T3 373 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 RRAGCQ9HB90 399 aa12.51□□□□□ -0.41
APTX-216ENST00000472896 ZNF500O60304 480 aaPredicted RBP12.5□□□□□ -0.41
APTX-216ENST00000472896 GYS1P13807 737 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 PPP2R1AP30153 589 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 FGD1P98174 961 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 FSTL1Q12841 308 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 CSPP1Q1MSJ5 1256 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 RWDD1Q9H446 243 aaPredicted RBP12.5□□□□□ -0.41
APTX-216ENST00000472896 RTCBQ9Y3I0 505 aaKnown RBP12.5□□□□□ -0.41
APTX-216ENST00000472896 PKD1L3Q7Z443 1732 aa12.5□□□□□ -0.41
APTX-216ENST00000472896 PRELPP51888 382 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 SMC5Q8IY18 1101 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 C16orf71Q8IYS4 520 aaPredicted RBP12.49□□□□□ -0.41
APTX-216ENST00000472896 EYA1Q99502 592 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 NCAPD2Q15021 1401 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 KCPQ6ZWJ8 1503 aa12.49□□□□□ -0.41
APTX-216ENST00000472896 PHKG2P15735 406 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 MCM5P33992 734 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 CARD14Q9BXL6 1004 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 BCAR3O75815 825 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 NASPP49321 788 aaPredicted RBP12.48□□□□□ -0.41
APTX-216ENST00000472896 GAS2L3Q86XJ1 694 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 PARP3Q9Y6F1 533 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 KIF24Q5T7B8 1368 aa12.48□□□□□ -0.41
APTX-216ENST00000472896 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
APTX-216ENST00000472896 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
APTX-216ENST00000472896 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
APTX-216ENST00000472896 DCAF5Q96JK2 942 aa12.47□□□□□ -0.41
APTX-216ENST00000472896 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
APTX-216ENST00000472896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.47□□□□□ -0.411e-6■□□□□ 10.8
APTX-216ENST00000472896 RNF181Q9P0P0 153 aa12.47□□□□□ -0.41
APTX-216ENST00000472896 KDRP35968 1356 aa12.47□□□□□ -0.41
APTX-216ENST00000472896 BRCA1P38398 1863 aaKnown RBP12.47□□□□□ -0.41
APTX-216ENST00000472896 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
APTX-216ENST00000472896 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
APTX-216ENST00000472896 PIM2Q9P1W9 311 aa12.46□□□□□ -0.41
APTX-216ENST00000472896 C4AP0C0L4 1744 aa12.46□□□□□ -0.42
APTX-216ENST00000472896 CHRNA5P30532 468 aa12.46□□□□□ -0.42
APTX-216ENST00000472896 RFC4P35249 363 aa12.46□□□□□ -0.42
APTX-216ENST00000472896 HOMEZQ8IX15 550 aa12.46□□□□□ -0.42
APTX-216ENST00000472896 SRP68Q9UHB9 627 aaKnown RBP12.46□□□□□ -0.42
APTX-216ENST00000472896 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.42
APTX-216ENST00000472896 GOLGA6L22H0YM25 854 aa12.45□□□□□ -0.42
APTX-216ENST00000472896 DDR1Q08345 913 aa12.45□□□□□ -0.42
APTX-216ENST00000472896 DALRD3Q5D0E6 543 aaKnown RBP12.45□□□□□ -0.42
APTX-216ENST00000472896 CLEC17AQ6ZS10 378 aa12.45□□□□□ -0.42
APTX-216ENST00000472896 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
APTX-216ENST00000472896 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
APTX-216ENST00000472896 DMTNQ08495 405 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 FAM13BQ9NYF5 915 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 MYH14Q7Z406 1995 aaKnown RBP12.44□□□□□ -0.42
APTX-216ENST00000472896 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 ARFGEF1Q9Y6D6 1849 aa12.44□□□□□ -0.42
APTX-216ENST00000472896 CNTNAP4Q9C0A0 1308 aa12.43□□□□□ -0.42
APTX-216ENST00000472896 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 RBM25P49756 843 aaKnown RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 R3HCC1Q9Y3T6 440 aaKnown RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 UQCRHLA0A096LP55 91 aa12.43□□□□□ -0.42
APTX-216ENST00000472896 UQCRHP07919 91 aa12.43□□□□□ -0.42
APTX-216ENST00000472896 HSPA1AP0DMV8 641 aaKnown RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 HSPA1BP0DMV9 641 aaKnown RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 ZNF445P59923 1031 aa12.43□□□□□ -0.42
APTX-216ENST00000472896 C1QBPQ07021 282 aaKnown RBP12.43□□□□□ -0.42
APTX-216ENST00000472896 SMC1BQ8NDV3 1235 aa12.43□□□□□ -0.42
APTX-216ENST00000472896 SBF1O95248 1867 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 A0A0U1RQG5 324 aaPredicted RBP12.42□□□□□ -0.42
APTX-216ENST00000472896 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 KLHL40Q2TBA0 621 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 CDCA8Q53HL2 280 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 SASS6Q6UVJ0 657 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 CCDC94Q9BW85 323 aaPredicted RBP12.42□□□□□ -0.42
APTX-216ENST00000472896 POLKQ9UBT6 870 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 KIF20BQ96Q89 1820 aa12.42□□□□□ -0.42
APTX-216ENST00000472896 RASSF7Q02833 373 aa12.41□□□□□ -0.42
APTX-216ENST00000472896 EIF4A2Q14240 407 aaKnown RBP12.41□□□□□ -0.42
APTX-216ENST00000472896 GTPBP4Q9BZE4 634 aaKnown RBP12.41□□□□□ -0.42
APTX-216ENST00000472896 TM4SF1P30408 202 aa12.41□□□□□ -0.42
APTX-216ENST00000472896 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
APTX-216ENST00000472896 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
APTX-216ENST00000472896 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
APTX-216ENST00000472896 APAF1O14727 1248 aa12.4□□□□□ -0.42
APTX-216ENST00000472896 PTCD1O75127 700 aaKnown RBP12.4□□□□□ -0.42
APTX-216ENST00000472896 MFAP1P55081 439 aaKnown RBP12.4□□□□□ -0.42
APTX-216ENST00000472896 PDLIM2Q96JY6 352 aa12.4□□□□□ -0.42
APTX-216ENST00000472896 PCDHB15Q9Y5E8 787 aa12.4□□□□□ -0.42
APTX-216ENST00000472896 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
APTX-216ENST00000472896 POLRMTO00411 1230 aaKnown RBP12.39□□□□□ -0.43
APTX-216ENST00000472896 KIF20AO95235 890 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms