RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ST5P78524 1137 aa20.18■□□□□ 0.82
VTI1A-203ENST00000472892 RASSF7Q02833 373 aa20.18■□□□□ 0.82
VTI1A-203ENST00000472892 ZNF622Q969S3 477 aaKnown RBP eCLIP20.18■□□□□ 0.82
VTI1A-203ENST00000472892 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
VTI1A-203ENST00000472892 ANKRD31Q8N7Z5 1873 aa20.18■□□□□ 0.82
VTI1A-203ENST00000472892 LMNB1P20700 586 aa20.17■□□□□ 0.82
VTI1A-203ENST00000472892 PRELPP51888 382 aa20.17■□□□□ 0.82
VTI1A-203ENST00000472892 RIPK4P57078 832 aa20.17■□□□□ 0.82
VTI1A-203ENST00000472892 NBPF5PQ86XG9 351 aaPredicted RBP20.17■□□□□ 0.82
VTI1A-203ENST00000472892 MYBBP1AQ9BQG0 1328 aaKnown RBP20.17■□□□□ 0.82
VTI1A-203ENST00000472892 SBF1O95248 1867 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 NPHP1O15259 732 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 SRGNP10124 158 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 KDM2BQ8NHM5 1336 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 ZC3H4Q9UPT8 1303 aaKnown RBP20.16■□□□□ 0.82
VTI1A-203ENST00000472892 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
VTI1A-203ENST00000472892 NFKBIEO00221 500 aa20.15■□□□□ 0.82
VTI1A-203ENST00000472892 HLFQ16534 295 aa20.15■□□□□ 0.82
VTI1A-203ENST00000472892 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
VTI1A-203ENST00000472892 CNKSR1Q969H4 720 aa20.15■□□□□ 0.82
VTI1A-203ENST00000472892 NIP7Q9Y221 180 aaKnown RBP eCLIP20.15■□□□□ 0.82
VTI1A-203ENST00000472892 KLRG2A4D1S0 409 aaPredicted RBP20.14■□□□□ 0.81
VTI1A-203ENST00000472892 C21orf2O43822 256 aa20.14■□□□□ 0.81
VTI1A-203ENST00000472892 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
VTI1A-203ENST00000472892 MASTLQ96GX5 879 aa20.14■□□□□ 0.81
VTI1A-203ENST00000472892 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
VTI1A-203ENST00000472892 CEP350Q5VT06 3117 aa20.14■□□□□ 0.81
VTI1A-203ENST00000472892 ERVV-1B6SEH8 477 aa20.13■□□□□ 0.81
VTI1A-203ENST00000472892 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
VTI1A-203ENST00000472892 RRAGCQ9HB90 399 aa20.12■□□□□ 0.81
VTI1A-203ENST00000472892 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
VTI1A-203ENST00000472892 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
VTI1A-203ENST00000472892 LAMB4A4D0S4 1761 aa20.11■□□□□ 0.81
VTI1A-203ENST00000472892 LMOD3Q0VAK6 560 aa20.11■□□□□ 0.81
VTI1A-203ENST00000472892 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
VTI1A-203ENST00000472892 ZNF219Q9P2Y4 722 aaPredicted RBP20.11■□□□□ 0.81
VTI1A-203ENST00000472892 COL11A2P13942 1736 aaPredicted RBP20.1■□□□□ 0.81
VTI1A-203ENST00000472892 ERBB4Q15303 1308 aa20.1■□□□□ 0.81
VTI1A-203ENST00000472892 MAP3K15Q6ZN16 1313 aa20.1■□□□□ 0.81
VTI1A-203ENST00000472892 PRPF40BQ6NWY9 871 aaKnown RBP20.1■□□□□ 0.81
VTI1A-203ENST00000472892 TTLL7Q6ZT98 887 aa20.1■□□□□ 0.81
VTI1A-203ENST00000472892 GLTPD2A6NH11 291 aa20.09■□□□□ 0.81
VTI1A-203ENST00000472892 MYL6BP14649 208 aa20.09■□□□□ 0.81
VTI1A-203ENST00000472892 NPR1P16066 1061 aa20.09■□□□□ 0.81
VTI1A-203ENST00000472892 C7orf43Q8WVR3 580 aa20.09■□□□□ 0.81
VTI1A-203ENST00000472892 LTBP3Q9NS15 1303 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 FAM177BA6PVY3 158 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 SOGA3Q5TF21 947 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 KIF6Q6ZMV9 814 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 CCDC146Q8IYE0 955 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 C16orf71Q8IYS4 520 aaPredicted RBP20.08■□□□□ 0.81
VTI1A-203ENST00000472892 RUNDC1Q96C34 613 aa20.08■□□□□ 0.81
VTI1A-203ENST00000472892 PDIA6Q15084 440 aa20.07■□□□□ 0.8
VTI1A-203ENST00000472892 PRKRIP1Q9H875 184 aaPredicted RBP20.07■□□□□ 0.8
VTI1A-203ENST00000472892 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
VTI1A-203ENST00000472892 SLX4Q8IY92 1834 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
VTI1A-203ENST00000472892 APLP1P51693 650 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 WDR43Q15061 677 aaKnown RBP eCLIP20.06■□□□□ 0.8
VTI1A-203ENST00000472892 NEUROD2Q15784 382 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 LRP10Q7Z4F1 713 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 NYXQ9GZU5 481 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 TRIM35Q9UPQ4 493 aa20.06■□□□□ 0.8
VTI1A-203ENST00000472892 CHL1O00533 1208 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 VEGFAP15692 232 aaPredicted RBP20.05■□□□□ 0.8
VTI1A-203ENST00000472892 FSTL1Q12841 308 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 ERFEQ4G0M1 354 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 ZBTB3Q9H5J0 574 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 FER1L6Q2WGJ9 1857 aa20.05■□□□□ 0.8
VTI1A-203ENST00000472892 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
VTI1A-203ENST00000472892 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
VTI1A-203ENST00000472892 GIGYF2Q6Y7W6 1299 aaKnown RBP20.04■□□□□ 0.8
VTI1A-203ENST00000472892 ALDH1B1P30837 517 aa20.03■□□□□ 0.8
VTI1A-203ENST00000472892 CRY2Q49AN0 593 aa20.03■□□□□ 0.8
VTI1A-203ENST00000472892 SUSD4Q5VX71 490 aa20.03■□□□□ 0.8
VTI1A-203ENST00000472892 NUTM1Q86Y26 1132 aa20.03■□□□□ 0.8
VTI1A-203ENST00000472892 TNRC6CQ9HCJ0 1690 aaKnown RBP20.03■□□□□ 0.8
VTI1A-203ENST00000472892 CCDC88AQ3V6T2 1871 aa20.03■□□□□ 0.8
VTI1A-203ENST00000472892 UBN2Q6ZU65 1347 aa20.02■□□□□ 0.8
VTI1A-203ENST00000472892 GPTP24298 496 aa20.02■□□□□ 0.8
VTI1A-203ENST00000472892 PROSER3Q2NL68 480 aa20.02■□□□□ 0.8
VTI1A-203ENST00000472892 CCDC93Q567U6 631 aa20.02■□□□□ 0.8
VTI1A-203ENST00000472892 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
VTI1A-203ENST00000472892 NUP98P52948 1817 aa20.02■□□□□ 0.79
VTI1A-203ENST00000472892 IBTKQ9P2D0 1353 aaPredicted RBP20.01■□□□□ 0.79
VTI1A-203ENST00000472892 POTECB2RU33 542 aa20.01■□□□□ 0.79
VTI1A-203ENST00000472892 ABCC12Q96J65 1359 aa20■□□□□ 0.79
VTI1A-203ENST00000472892 RTKN2Q8IZC4 609 aa20■□□□□ 0.79
VTI1A-203ENST00000472892 DNAJC5GQ8N7S2 189 aa20■□□□□ 0.79
VTI1A-203ENST00000472892 SMC1BQ8NDV3 1235 aa20■□□□□ 0.79
VTI1A-203ENST00000472892 ANXA1P04083 346 aa19.99■□□□□ 0.79
VTI1A-203ENST00000472892 HOXA10P31260 410 aaPredicted RBP19.99■□□□□ 0.79
VTI1A-203ENST00000472892 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
VTI1A-203ENST00000472892 RIC1Q4ADV7 1423 aa19.99■□□□□ 0.79
VTI1A-203ENST00000472892 TIAM2Q8IVF5 1701 aa19.99■□□□□ 0.79
VTI1A-203ENST00000472892 NTSR2O95665 410 aa19.98■□□□□ 0.79
VTI1A-203ENST00000472892 FKBP4Q02790 459 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms