RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 COPS6Q7L5N1 327 aa25.64■■□□□ 1.7
SF1-213ENST00000472725 SGIP1Q9BQI5 828 aa25.64■■□□□ 1.7
SF1-213ENST00000472725 ATF5Q9Y2D1 282 aaPredicted RBP25.64■■□□□ 1.7
SF1-213ENST00000472725 ANXA1P04083 346 aa25.63■■□□□ 1.69
SF1-213ENST00000472725 XAGE3Q8WTP9 111 aa25.63■■□□□ 1.69
SF1-213ENST00000472725 BCL2L12Q9HB09 334 aa25.63■■□□□ 1.69
SF1-213ENST00000472725 PTGER2P43116 358 aa25.62■■□□□ 1.69
SF1-213ENST00000472725 FKBP8Q14318 412 aa25.62■■□□□ 1.69
SF1-213ENST00000472725 TTLL7Q6ZT98 887 aa25.62■■□□□ 1.69
SF1-213ENST00000472725 NUP98P52948 1817 aa25.61■■□□□ 1.69
SF1-213ENST00000472725 SLC4A2P04920 1241 aa25.61■■□□□ 1.69
SF1-213ENST00000472725 ALDH1L2Q3SY69 923 aa25.61■■□□□ 1.69
SF1-213ENST00000472725 DDX58O95786 925 aaKnown RBP25.6■■□□□ 1.69
SF1-213ENST00000472725 TM4SF1P30408 202 aa25.6■■□□□ 1.69
SF1-213ENST00000472725 MSL1Q68DK7 614 aa25.6■■□□□ 1.69
SF1-213ENST00000472725 ANKRD13DQ6ZTN6 518 aa25.6■■□□□ 1.69
SF1-213ENST00000472725 PLBD2Q8NHP8 589 aa25.6■■□□□ 1.69
SF1-213ENST00000472725 HSP90AB3PQ58FF7 597 aa25.59■■□□□ 1.69
SF1-213ENST00000472725 GIGYF2Q6Y7W6 1299 aaKnown RBP25.59■■□□□ 1.69
SF1-213ENST00000472725 ATP10DQ9P241 1426 aa25.58■■□□□ 1.69
SF1-213ENST00000472725 AIMP1Q12904 312 aaKnown RBP25.58■■□□□ 1.69
SF1-213ENST00000472725 MMP10P09238 476 aa25.57■■□□□ 1.68
SF1-213ENST00000472725 PHAXQ9H814 394 aaKnown RBP25.57■■□□□ 1.68
SF1-213ENST00000472725 PARP3Q9Y6F1 533 aa25.57■■□□□ 1.68
SF1-213ENST00000472725 NFIXQ14938 502 aa25.56■■□□□ 1.68
SF1-213ENST00000472725 SETDB2Q96T68 719 aa25.56■■□□□ 1.68
SF1-213ENST00000472725 ZBTB3Q9H5J0 574 aa25.56■■□□□ 1.68
SF1-213ENST00000472725 BRPF1P55201 1214 aaPredicted RBP25.55■■□□□ 1.68
SF1-213ENST00000472725 FLIIQ13045 1269 aa25.55■■□□□ 1.68
SF1-213ENST00000472725 HLFQ16534 295 aa25.55■■□□□ 1.68
SF1-213ENST00000472725 TBC1D9BQ66K14 1250 aa25.55■■□□□ 1.68
SF1-213ENST00000472725 CARMIL3Q8ND23 1372 aa25.55■■□□□ 1.68
SF1-213ENST00000472725 ANKRD36CQ5JPF3 1778 aa25.54■■□□□ 1.68
SF1-213ENST00000472725 TCERG1O14776 1098 aaKnown RBP25.54■■□□□ 1.68
SF1-213ENST00000472725 POLRMTO00411 1230 aaKnown RBP25.53■■□□□ 1.68
SF1-213ENST00000472725 KSR2Q6VAB6 950 aa25.53■■□□□ 1.68
SF1-213ENST00000472725 RIC3Q7Z5B4 369 aa25.53■■□□□ 1.68
SF1-213ENST00000472725 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
SF1-213ENST00000472725 ARFGEF2Q9Y6D5 1785 aa25.53■■□□□ 1.68
SF1-213ENST00000472725 NRXN2Q9P2S2 1712 aa25.52■■□□□ 1.68
SF1-213ENST00000472725 TCIRG1Q13488 830 aa25.52■■□□□ 1.68
SF1-213ENST00000472725 ZNF34Q8IZ26 560 aa25.52■■□□□ 1.68
SF1-213ENST00000472725 MRPL50Q8N5N7 158 aaKnown RBP25.52■■□□□ 1.68
SF1-213ENST00000472725 NIP7Q9Y221 180 aaKnown RBP eCLIP25.52■■□□□ 1.68
SF1-213ENST00000472725 DDR1Q08345 913 aa25.51■■□□□ 1.67
SF1-213ENST00000472725 PARP10Q53GL7 1025 aa25.51■■□□□ 1.67
SF1-213ENST00000472725 G2E3Q7L622 706 aa25.51■■□□□ 1.67
SF1-213ENST00000472725 PPP1R1BQ9UD71 204 aaPredicted RBP25.51■■□□□ 1.67
SF1-213ENST00000472725 PTPRCP08575 1304 aa25.5■■□□□ 1.67
SF1-213ENST00000472725 RARSP54136 660 aaKnown RBP25.5■■□□□ 1.67
SF1-213ENST00000472725 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
SF1-213ENST00000472725 SMC4Q9NTJ3 1288 aa25.5■■□□□ 1.67
SF1-213ENST00000472725 IBTKQ9P2D0 1353 aaPredicted RBP25.5■■□□□ 1.67
SF1-213ENST00000472725 AFDNP55196 1824 aaKnown RBP25.49■■□□□ 1.67
SF1-213ENST00000472725 SERPINB2P05120 415 aa25.49■■□□□ 1.67
SF1-213ENST00000472725 TRIM28Q13263 835 aaKnown RBP25.49■■□□□ 1.67
SF1-213ENST00000472725 FKBP5Q13451 457 aaPredicted RBP25.49■■□□□ 1.67
SF1-213ENST00000472725 BICDL1Q6ZP65 573 aa25.49■■□□□ 1.67
SF1-213ENST00000472725 PI4KAP2A4QPH2 592 aa25.48■■□□□ 1.67
SF1-213ENST00000472725 PI4KAP1Q8N8J0 262 aa25.48■■□□□ 1.67
SF1-213ENST00000472725 METTL22Q9BUU2 404 aaPredicted RBP25.48■■□□□ 1.67
SF1-213ENST00000472725 NYXQ9GZU5 481 aa25.48■■□□□ 1.67
SF1-213ENST00000472725 CD2APQ9Y5K6 639 aa25.48■■□□□ 1.67
SF1-213ENST00000472725 RNF123Q5XPI4 1314 aa25.47■■□□□ 1.67
SF1-213ENST00000472725 TPTE2Q6XPS3 522 aa25.47■■□□□ 1.67
SF1-213ENST00000472725 ISCA1Q9BUE6 129 aa25.47■■□□□ 1.67
SF1-213ENST00000472725 MAP3K2Q9Y2U5 619 aa25.47■■□□□ 1.67
SF1-213ENST00000472725 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
SF1-213ENST00000472725 ADCY9O60503 1353 aa25.46■■□□□ 1.67
SF1-213ENST00000472725 NEXNQ0ZGT2 675 aa25.46■■□□□ 1.67
SF1-213ENST00000472725 PPP1R42Q7Z4L9 355 aa25.46■■□□□ 1.67
SF1-213ENST00000472725 KIF16BQ96L93 1317 aa25.45■■□□□ 1.66
SF1-213ENST00000472725 NBPF5PQ86XG9 351 aaPredicted RBP25.45■■□□□ 1.66
SF1-213ENST00000472725 DNAAF4Q8WXU2 420 aa25.45■■□□□ 1.66
SF1-213ENST00000472725 C10orf71Q711Q0 1435 aa25.45■■□□□ 1.66
SF1-213ENST00000472725 CNBD1Q8NA66 436 aa25.44■■□□□ 1.66
SF1-213ENST00000472725 UBN2Q6ZU65 1347 aa25.43■■□□□ 1.66
SF1-213ENST00000472725 GPTP24298 496 aa25.43■■□□□ 1.66
SF1-213ENST00000472725 NLRP10Q86W26 655 aa25.43■■□□□ 1.66
SF1-213ENST00000472725 CCDC191Q8NCU4 936 aa25.43■■□□□ 1.66
SF1-213ENST00000472725 ARHGAP45Q92619 1136 aa25.43■■□□□ 1.66
SF1-213ENST00000472725 ST5P78524 1137 aa25.42■■□□□ 1.66
SF1-213ENST00000472725 BCL2L13Q9BXK5 485 aa25.42■■□□□ 1.66
SF1-213ENST00000472725 PDZRN3Q9UPQ7 1066 aa25.42■■□□□ 1.66
SF1-213ENST00000472725 NPHP1O15259 732 aa25.41■■□□□ 1.66
SF1-213ENST00000472725 IPO8O15397 1037 aaKnown RBP25.41■■□□□ 1.66
SF1-213ENST00000472725 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
SF1-213ENST00000472725 MYD88Q99836 296 aa25.41■■□□□ 1.66
SF1-213ENST00000472725 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
SF1-213ENST00000472725 TGFB2P61812 414 aa25.4■■□□□ 1.66
SF1-213ENST00000472725 SUSD4Q5VX71 490 aa25.4■■□□□ 1.66
SF1-213ENST00000472725 LINS1Q8NG48 757 aa25.4■■□□□ 1.66
SF1-213ENST00000472725 FHDC1Q9C0D6 1143 aaPredicted RBP25.4■■□□□ 1.66
SF1-213ENST00000472725 RIC1Q4ADV7 1423 aa25.39■■□□□ 1.66
SF1-213ENST00000472725 NTSR2O95665 410 aa25.39■■□□□ 1.66
SF1-213ENST00000472725 GTF2E1P29083 439 aaPredicted RBP25.39■■□□□ 1.66
SF1-213ENST00000472725 BRIP1Q9BX63 1249 aa25.39■■□□□ 1.66
SF1-213ENST00000472725 API5Q9BZZ5 524 aaKnown RBP25.39■■□□□ 1.66
SF1-213ENST00000472725 ATP5J2-PTCD1G3V325 749 aa25.38■■□□□ 1.65
SF1-213ENST00000472725 SYT17Q9BSW7 474 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms