RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 SLC9A9Q8IVB4 645 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 ZNF784Q8NCA9 323 aaPredicted RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 LRCH3Q96II8 777 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 RNPC3Q96LT9 517 aaKnown RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.81□□□□□ -1.8
XRN1-210ENST00000472697 LOC102724159A0A0B4J2E5 919 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 RBAK-RBAKDNI3L0D1 243 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 ZBTB24O43167 697 aaPredicted RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 GNA15P30679 374 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 ARID5AQ03989 594 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 USP4Q13107 963 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 PWP2Q15269 919 aaKnown RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 TKFCQ3LXA3 575 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 NBPF14Q5TI25 921 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 CCDC81Q6ZN84 652 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 ZDHHC1Q8WTX9 485 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 NUDT16Q96DE0 195 aaKnown RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 SLC10A4Q96EP9 437 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 PRDM16Q9HAZ2 1276 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 ARHGEF10LQ9HCE6 1279 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 KBTBD4Q9NVX7 518 aa3.81□□□□□ -1.8
XRN1-210ENST00000472697 RBM19Q9Y4C8 960 aaKnown RBP3.81□□□□□ -1.8
XRN1-210ENST00000472697 EIF4G1Q04637 1599 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 K7ELQ4 463 aaPredicted RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 AMPD3Q01432 767 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 DGKZQ13574 1117 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 C21orf62-AS1Q17RA5 79 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 FILIP1Q7Z7B0 1213 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 NOP9Q86U38 636 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 CELF2-AS1Q8N7Q2 184 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 FAM169BQ8N8A8 192 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 HNRNPLLQ8WVV9 542 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 TSR2Q969E8 191 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 KCNH8Q96L42 1107 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 STAC3Q96MF2 364 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 KCTD15Q96SI1 283 aaPredicted RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 FCF1Q9Y324 198 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 GPSM3Q9Y4H4 160 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 BRD2P25440 801 aaKnown RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 ARID5BQ14865 1188 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 NBPF20Q3BBV1 942 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 NXPE4Q6UWF7 544 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 GJD3Q8N144 294 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 KDF1Q8NAX2 398 aaPredicted RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 KCNB2Q92953 911 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 EMID1Q96A84 441 aaPredicted RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 CRELD1Q96HD1 420 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 CUEDC1Q9NWM3 386 aaPredicted RBP3.8□□□□□ -1.8
XRN1-210ENST00000472697 TLL2Q9Y6L7 1015 aa3.8□□□□□ -1.8
XRN1-210ENST00000472697 hCG_2014768A0A024R1R8 64 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 IGFBP4P22692 258 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 NOS2P35228 1153 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 ZAP70P43403 619 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 CRKP46108 304 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 SKOR1P84550 965 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 KCTD12Q96CX2 325 aaKnown RBP3.79□□□□□ -1.8
XRN1-210ENST00000472697 SCHIP1Q9P0W5 487 aaPredicted RBP3.79□□□□□ -1.8
XRN1-210ENST00000472697 PRR12Q9ULL5 1215 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 TLR6Q9Y2C9 796 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 COL4A3BPQ9Y5P4 624 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 PTCD1O75127 700 aaKnown RBP3.79□□□□□ -1.8
XRN1-210ENST00000472697 S1PR4O95977 384 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 PDGFAP04085 211 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 INHAP05111 366 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 TRIP4Q15650 581 aaPredicted RBP3.79□□□□□ -1.8
XRN1-210ENST00000472697 ZNF295-AS1Q8N0V1 137 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 PLD4Q96BZ4 506 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 PCDH12Q9NPG4 1184 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 ADAMTS1Q9UHI8 967 aa3.79□□□□□ -1.8
XRN1-210ENST00000472697 THRAP3Q9Y2W1 955 aaKnown RBP3.79□□□□□ -1.8
XRN1-210ENST00000472697 MINDY4BA8MYZ0 360 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 NR3C2P08235 984 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 NCLP19338 710 aaKnown RBP3.78□□□□□ -1.8
XRN1-210ENST00000472697 GJA8P48165 433 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 SERINC3Q13530 473 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 LILRB2Q8N423 598 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 MRPL50Q8N5N7 158 aaKnown RBP3.78□□□□□ -1.8
XRN1-210ENST00000472697 ZNF280CQ8ND82 737 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 NPHS2Q9NP85 383 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 LATS2Q9NRM7 1088 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 SALL2Q9Y467 1007 aaPredicted RBP3.78□□□□□ -1.8
XRN1-210ENST00000472697 RIPOR2Q9Y4F9 1068 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 LILRA1O75019 489 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 FSHRP23945 695 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 PPP4CP60510 307 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 SEPT6Q14141 434 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 COL19A1Q14993 1142 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 MAP3K11Q16584 847 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 JAMLQ86YT9 394 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 PGBD3Q8N328 593 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 SLC43A3Q8NBI5 491 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 ST7Q9NRC1 585 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 UBP1Q9NZI7 540 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 AK5Q9Y6K8 562 aa3.78□□□□□ -1.8
XRN1-210ENST00000472697 IL2RAP01589 272 aa3.77□□□□□ -1.81
XRN1-210ENST00000472697 FOXK2Q01167 660 aa3.77□□□□□ -1.81
XRN1-210ENST00000472697 FAM160A1Q05DH4 1040 aa3.77□□□□□ -1.81
XRN1-210ENST00000472697 SRPK1Q96SB4 655 aaKnown RBP3.77□□□□□ -1.81
XRN1-210ENST00000472697 CHPF2Q9P2E5 772 aa3.77□□□□□ -1.81
XRN1-210ENST00000472697 PPT2Q9UMR5 302 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms