RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 ALKQ9UM73 1620 aa16.64■□□□□ 0.25
IFFO1-208ENST00000472558 CASTP20810 708 aaKnown RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 COL9A3Q14050 684 aaPredicted RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 TERF2Q15554 542 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 TAF3Q5VWG9 929 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 EDC4Q6P2E9 1401 aaKnown RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 TMEM2Q9UHN6 1383 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 USP27XA6NNY8 438 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 MAP3K11Q16584 847 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 KMT5BQ4FZB7 885 aa16.63■□□□□ 0.25
IFFO1-208ENST00000472558 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 V9GYY5 206 aaPredicted RBP16.63■□□□□ 0.25
IFFO1-208ENST00000472558 ZNF75DP51815 510 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 FERMT3Q86UX7 667 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 DRC7Q8IY82 874 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 CCDC112Q8NEF3 446 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 COG3Q96JB2 828 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 NUP62CLQ9H1M0 184 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 VGLL3A8MV65 326 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
IFFO1-208ENST00000472558 NECAB1Q8N987 351 aa16.62■□□□□ 0.25
IFFO1-208ENST00000472558 NUTM2FA1L443 756 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
IFFO1-208ENST00000472558 TRIM5Q9C035 493 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 ST7Q9NRC1 585 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 UBR1Q8IWV7 1749 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 ME3Q16798 604 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 ZNF592Q92610 1267 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 DACT1Q9NYF0 836 aa16.61■□□□□ 0.25
IFFO1-208ENST00000472558 TPD52L1Q16890 204 aaPredicted RBP16.6■□□□□ 0.25
IFFO1-208ENST00000472558 CDC37L1Q7L3B6 337 aa16.6■□□□□ 0.25
IFFO1-208ENST00000472558 PAXBP1Q9Y5B6 917 aa16.6■□□□□ 0.25
IFFO1-208ENST00000472558 PTH1RQ03431 593 aa16.6■□□□□ 0.25
IFFO1-208ENST00000472558 ZNF215Q9UL58 517 aaPredicted RBP16.6■□□□□ 0.25
IFFO1-208ENST00000472558 FLIIQ13045 1269 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 TSPYL4Q9UJ04 414 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 AOX1Q06278 1338 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 GNAI3P08754 354 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 RBM6P78332 1123 aaKnown RBP16.59■□□□□ 0.25
IFFO1-208ENST00000472558 IRX5P78411 483 aaPredicted RBP16.59■□□□□ 0.25
IFFO1-208ENST00000472558 USP44Q9H0E7 712 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 FAM53CQ9NYF3 392 aa16.59■□□□□ 0.25
IFFO1-208ENST00000472558 TNMDQ9H2S6 317 aa16.58■□□□□ 0.25
IFFO1-208ENST00000472558 SOS1Q07889 1333 aaPredicted RBP16.58■□□□□ 0.24
IFFO1-208ENST00000472558 KCNJ4P48050 445 aa16.58■□□□□ 0.24
IFFO1-208ENST00000472558 CEP135Q66GS9 1140 aa16.58■□□□□ 0.24
IFFO1-208ENST00000472558 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
IFFO1-208ENST00000472558 ERBB3P21860 1342 aa16.58■□□□□ 0.24
IFFO1-208ENST00000472558 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 FBXO38Q6PIJ6 1188 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
IFFO1-208ENST00000472558 DNAJC25Q9H1X3 360 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 PDRG1Q9NUG6 133 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 TFIP11Q9UBB9 837 aaKnown RBP16.57■□□□□ 0.24
IFFO1-208ENST00000472558 CLIP2Q9UDT6 1046 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 XRN1Q8IZH2 1706 aaKnown RBP16.57■□□□□ 0.24
IFFO1-208ENST00000472558 KRT222Q8N1A0 295 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 NRXN3Q9Y4C0 1643 aa16.57■□□□□ 0.24
IFFO1-208ENST00000472558 KRT85P78386 507 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 SSH3Q8TE77 659 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 NRKQ7Z2Y5 1582 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 SURF6O75683 361 aaKnown RBP16.56■□□□□ 0.24
IFFO1-208ENST00000472558 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 LARP1BQ659C4 914 aaKnown RBP16.56■□□□□ 0.24
IFFO1-208ENST00000472558 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
IFFO1-208ENST00000472558 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
IFFO1-208ENST00000472558 RHPN1Q8TCX5 695 aa16.56■□□□□ 0.24
IFFO1-208ENST00000472558 ERICH4A6NGS2 130 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 NR1I2O75469 434 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ZNF165P49910 485 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
IFFO1-208ENST00000472558 LRRC8AQ8IWT6 810 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ZNF397Q8NF99 534 aaPredicted RBP16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 WASLO00401 505 aaPredicted RBP16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ELF2Q15723 593 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 NYAP1Q6ZVC0 841 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 PPP1R42Q7Z4L9 355 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ZNF446Q9NWS9 450 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 EID1Q9Y6B2 187 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 ELP1O95163 1332 aa16.55■□□□□ 0.24
IFFO1-208ENST00000472558 DLC1Q96QB1 1528 aa16.54■□□□□ 0.24
IFFO1-208ENST00000472558 NUDT16Q96DE0 195 aaKnown RBP16.54■□□□□ 0.24
IFFO1-208ENST00000472558 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
IFFO1-208ENST00000472558 STK31Q9BXU1 1019 aa16.54■□□□□ 0.24
IFFO1-208ENST00000472558 CNTROBQ8N137 903 aa16.53■□□□□ 0.24
IFFO1-208ENST00000472558 ARHGEF10O15013 1369 aa16.53■□□□□ 0.24
IFFO1-208ENST00000472558 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
IFFO1-208ENST00000472558 CLSTN2Q9H4D0 955 aa16.53■□□□□ 0.24
IFFO1-208ENST00000472558 SH2B1Q9NRF2 756 aaPredicted RBP16.53■□□□□ 0.24
IFFO1-208ENST00000472558 ADAMTS13Q76LX8 1427 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms