RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 CYP2E1P05181 493 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 UBTFL1P0CB47 393 aaPredicted RBP16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 PDIA6Q15084 440 aa16.11■□□□□ 0.17
SCAMP4-207ENST00000472442 MRC1P22897 1456 aa16.1■□□□□ 0.17
SCAMP4-207ENST00000472442 NBPF7P0C2Y1 421 aaPredicted RBP16.1■□□□□ 0.17
SCAMP4-207ENST00000472442 TTC22Q5TAA0 569 aa16.1■□□□□ 0.17
SCAMP4-207ENST00000472442 MAP7D2Q96T17 732 aa16.1■□□□□ 0.17
SCAMP4-207ENST00000472442 PRPF40AO75400 957 aaKnown RBP16.09■□□□□ 0.17
SCAMP4-207ENST00000472442 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
SCAMP4-207ENST00000472442 ZNF496Q96IT1 587 aaPredicted RBP16.09■□□□□ 0.17
SCAMP4-207ENST00000472442 ARID3AQ99856 593 aa16.09■□□□□ 0.17
SCAMP4-207ENST00000472442 C5P01031 1676 aa16.09■□□□□ 0.17
SCAMP4-207ENST00000472442 GPT2Q8TD30 523 aa16.08■□□□□ 0.17
SCAMP4-207ENST00000472442 ZKSCAN5Q9Y2L8 839 aa16.08■□□□□ 0.17
SCAMP4-207ENST00000472442 DDX21Q9NR30 783 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCAMP4-207ENST00000472442 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.16
SCAMP4-207ENST00000472442 MAP3K2Q9Y2U5 619 aa16.08■□□□□ 0.16
SCAMP4-207ENST00000472442 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
SCAMP4-207ENST00000472442 ZGPATQ8N5A5 531 aaKnown RBP16.07■□□□□ 0.16
SCAMP4-207ENST00000472442 SSH3Q8TE77 659 aa16.07■□□□□ 0.16
SCAMP4-207ENST00000472442 HYPKQ9NX55 129 aa16.07■□□□□ 0.16
SCAMP4-207ENST00000472442 CHAMP1Q96JM3 812 aa16.07■□□□□ 0.16
SCAMP4-207ENST00000472442 LARP1Q6PKG0 1096 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-207ENST00000472442 PPP1R42Q7Z4L9 355 aa16.06■□□□□ 0.16
SCAMP4-207ENST00000472442 PARP4Q9UKK3 1724 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-207ENST00000472442 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 CARD10Q9BWT7 1032 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 USP16Q9Y5T5 823 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 SYCE3A1L190 88 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 POLA2Q14181 598 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 LRRCC1Q9C099 1032 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 STRN4Q9NRL3 753 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 SDSP20132 328 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 CABP4P57796 275 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 USP26Q9BXU7 913 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 OSBPL3Q9H4L5 887 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 TMEM63CQ9P1W3 806 aa16.05■□□□□ 0.16
SCAMP4-207ENST00000472442 PDE1AP54750 535 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 AIMP1Q12904 312 aaKnown RBP16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 CSPP1Q1MSJ5 1256 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 LRP10Q7Z4F1 713 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 LRSAM1Q6UWE0 723 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 ZDHHC9Q9Y397 364 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 GLI3P10071 1580 aa16.04■□□□□ 0.16
SCAMP4-207ENST00000472442 PCDH11XQ9BZA7 1347 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 PCDH11YQ9BZA8 1340 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 CWC22Q9HCG8 908 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 NSFL1CQ9UNZ2 370 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 DYNC1I1O14576 645 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 ALDH1L1O75891 902 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 SNRPA1P09661 255 aaKnown RBP16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 MYL6BP14649 208 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 IL2RBP14784 551 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 TTC5Q8N0Z6 440 aa16.03■□□□□ 0.16
SCAMP4-207ENST00000472442 SRGAP3O43295 1099 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 RNF214Q8ND24 703 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 CCDC39Q9UFE4 941 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 MCM5P33992 734 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 TSHZ3Q63HK5 1081 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 FMNL2Q96PY5 1086 aa16.02■□□□□ 0.16
SCAMP4-207ENST00000472442 SHANK3Q9BYB0 1731 aa16.02■□□□□ 0.15
SCAMP4-207ENST00000472442 ST18O60284 1047 aa16.02■□□□□ 0.15
SCAMP4-207ENST00000472442 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.15
SCAMP4-207ENST00000472442 SASS6Q6UVJ0 657 aa16.02■□□□□ 0.15
SCAMP4-207ENST00000472442 EVA1CP58658 441 aa16.01■□□□□ 0.15
SCAMP4-207ENST00000472442 NKX1-1Q15270 411 aaPredicted RBP16.01■□□□□ 0.15
SCAMP4-207ENST00000472442 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
SCAMP4-207ENST00000472442 XAGE3Q8WTP9 111 aa16.01■□□□□ 0.15
SCAMP4-207ENST00000472442 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
SCAMP4-207ENST00000472442 IGKV5-2P06315 115 aa16■□□□□ 0.15
SCAMP4-207ENST00000472442 COPS6Q7L5N1 327 aa16■□□□□ 0.15
SCAMP4-207ENST00000472442 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
SCAMP4-207ENST00000472442 DDX54Q8TDD1 881 aaKnown RBP16■□□□□ 0.15
SCAMP4-207ENST00000472442 C9orf78Q9NZ63 289 aaPredicted RBP16■□□□□ 0.15
SCAMP4-207ENST00000472442 MTERF4Q7Z6M4 381 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 IL1RAPL2Q9NP60 686 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 MX1P20591 662 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 MTX1Q13505 466 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 UTYO14607 1347 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 ERVV-2B6SEH9 535 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
SCAMP4-207ENST00000472442 TUBGCP6Q96RT7 1819 aa15.98■□□□□ 0.15
SCAMP4-207ENST00000472442 GRM8O00222 908 aa15.98■□□□□ 0.15
SCAMP4-207ENST00000472442 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
SCAMP4-207ENST00000472442 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
SCAMP4-207ENST00000472442 RAB11FIP3O75154 756 aa15.97■□□□□ 0.15
SCAMP4-207ENST00000472442 PTMAP06454 111 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-207ENST00000472442 SMAP1Q8IYB5 467 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-207ENST00000472442 PRDM10Q9NQV6 1147 aa15.97■□□□□ 0.15
SCAMP4-207ENST00000472442 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
SCAMP4-207ENST00000472442 ANKRD13DQ6ZTN6 518 aa15.96■□□□□ 0.15
SCAMP4-207ENST00000472442 METTL22Q9BUU2 404 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-207ENST00000472442 UBR2Q8IWV8 1755 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms