RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
SCAMP3-205ENST00000472397 CACNA1SQ13698 1873 aa13.57□□□□□ -0.24
SCAMP3-205ENST00000472397 DLEC1Q9Y238 1755 aa13.56□□□□□ -0.24
SCAMP3-205ENST00000472397 IL6STP40189 918 aaPredicted RBP13.56□□□□□ -0.24
SCAMP3-205ENST00000472397 DPY19L2Q6NUT2 758 aa13.56□□□□□ -0.24
SCAMP3-205ENST00000472397 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
SCAMP3-205ENST00000472397 SLX4Q8IY92 1834 aa13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 U2AF1L5P0DN76 240 aaPredicted RBP13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 ST5P78524 1137 aa13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 U2AF1Q01081 240 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 NBPF5PQ86XG9 351 aaPredicted RBP13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 TEX13AQ9BXU3 409 aaPredicted RBP13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 ZNF277Q9NRM2 450 aaPredicted RBP13.55□□□□□ -0.24
SCAMP3-205ENST00000472397 SRGNP10124 158 aa13.54□□□□□ -0.24
SCAMP3-205ENST00000472397 EAPPQ56P03 285 aaPredicted RBP13.54□□□□□ -0.24
SCAMP3-205ENST00000472397 NBPF26B4DH59 902 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 TCERG1O14776 1098 aaKnown RBP13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 NBPF10Q6P3W6 841 aaKnown RBP13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 NBPF15Q8N660 670 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 MASTLQ96GX5 879 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 CLEC11AQ9Y240 323 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 ZC3H4Q9UPT8 1303 aaKnown RBP13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 SCN7AQ01118 1682 aa13.53□□□□□ -0.24
SCAMP3-205ENST00000472397 HLFQ16534 295 aa13.52□□□□□ -0.25
SCAMP3-205ENST00000472397 STYK1Q6J9G0 422 aa13.52□□□□□ -0.25
SCAMP3-205ENST00000472397 NIP7Q9Y221 180 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCAMP3-205ENST00000472397 ZNF541Q9H0D2 1346 aa13.52□□□□□ -0.25
SCAMP3-205ENST00000472397 SIPA1L3O60292 1781 aaPredicted RBP13.51□□□□□ -0.25
SCAMP3-205ENST00000472397 RTF1Q92541 710 aaKnown RBP13.51□□□□□ -0.25
SCAMP3-205ENST00000472397 CFAP53Q96M91 514 aa13.51□□□□□ -0.25
SCAMP3-205ENST00000472397 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
SCAMP3-205ENST00000472397 NUTM1Q86Y26 1132 aa13.5□□□□□ -0.25
SCAMP3-205ENST00000472397 THUMPD2Q9BTF0 503 aaKnown RBP13.5□□□□□ -0.25
SCAMP3-205ENST00000472397 FER1L6Q2WGJ9 1857 aa13.5□□□□□ -0.25
SCAMP3-205ENST00000472397 CEMIPQ8WUJ3 1361 aa13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 KCNA4P22459 653 aa13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 CCDC93Q567U6 631 aa13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
SCAMP3-205ENST00000472397 FOXN1O15353 648 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 GPTP24298 496 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 FMR1Q06787 632 aaKnown RBP eCLIP13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 SYNE4Q8N205 404 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 NUDCQ9Y266 331 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 GJA3Q9Y6H8 435 aa13.48□□□□□ -0.25
SCAMP3-205ENST00000472397 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 MYL6BP14649 208 aa13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 NPR1P16066 1061 aa13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 FKBP4Q02790 459 aaKnown RBP eCLIP13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 MAP1SQ66K74 1059 aaPredicted RBP13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 TPTE2Q6XPS3 522 aa13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 TTLL7Q6ZT98 887 aa13.47□□□□□ -0.25
SCAMP3-205ENST00000472397 LTBP3Q9NS15 1303 aa13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 BCORQ6W2J9 1755 aa13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 ZBTB3Q9H5J0 574 aa13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 ZNF652Q9Y2D9 606 aa13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 DICER1Q9UPY3 1922 aaKnown RBP13.46□□□□□ -0.25
SCAMP3-205ENST00000472397 ABCC12Q96J65 1359 aa13.45□□□□□ -0.26
SCAMP3-205ENST00000472397 PCNTO95613 3336 aa13.45□□□□□ -0.26
SCAMP3-205ENST00000472397 VEGFBP49765 207 aa13.45□□□□□ -0.26
SCAMP3-205ENST00000472397 GRM1Q13255 1194 aa13.45□□□□□ -0.26
SCAMP3-205ENST00000472397 EPHX2P34913 555 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 IARSP41252 1262 aaKnown RBP13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 TAF7Q15545 349 aaPredicted RBP13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 SOGA3Q5TF21 947 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 C3orf67Q6ZVT6 689 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 LDHDQ86WU2 507 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 HACL1Q9UJ83 578 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
SCAMP3-205ENST00000472397 IQCA1LA6NCM1 817 aa13.43□□□□□ -0.26
SCAMP3-205ENST00000472397 ITGBL1O95965 494 aaPredicted RBP13.43□□□□□ -0.26
SCAMP3-205ENST00000472397 ANXA1P04083 346 aa13.43□□□□□ -0.26
SCAMP3-205ENST00000472397 CLEC4GQ6UXB4 293 aa13.43□□□□□ -0.26
SCAMP3-205ENST00000472397 CNTNAP1P78357 1384 aa13.43□□□□□ -0.26
SCAMP3-205ENST00000472397 PASKQ96RG2 1323 aa13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 TMEM88BA6NKF7 163 aa13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 NECTIN2Q92692 538 aa13.42□□□□□ -0.26
SCAMP3-205ENST00000472397 COL4A5P29400 1685 aa13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 LBX1P52954 281 aa13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 RTKN2Q8IZC4 609 aa13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 RPGRQ92834 1020 aaKnown RBP13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 L3MBTL3Q96JM7 780 aaPredicted RBP13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 ABT1Q9ULW3 272 aaKnown RBP13.41□□□□□ -0.26
SCAMP3-205ENST00000472397 UBN2Q6ZU65 1347 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 KLRG2A4D1S0 409 aaPredicted RBP13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 TRAF5O00463 557 aa13.4□□□□□ -0.26
SCAMP3-205ENST00000472397 EIF2S2P20042 333 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms