RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 NEXNQ0ZGT2 675 aa21.42■■□□□ 1.02
CCM2-205ENST00000472223 KSR2Q6VAB6 950 aa21.42■■□□□ 1.02
CCM2-205ENST00000472223 UBR3Q6ZT12 1888 aa21.42■■□□□ 1.02
CCM2-205ENST00000472223 MAP3K15Q6ZN16 1313 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 SOCS7O14512 581 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 HSP90AB3PQ58FF7 597 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 TTLL7Q6ZT98 887 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 FTSJ3Q8IY81 847 aaKnown RBP21.41■■□□□ 1.02
CCM2-205ENST00000472223 ZBTB3Q9H5J0 574 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 NARFQ9UHQ1 456 aa21.41■■□□□ 1.02
CCM2-205ENST00000472223 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
CCM2-205ENST00000472223 ATF7IPQ6VMQ6 1270 aa21.4■■□□□ 1.02
CCM2-205ENST00000472223 LRP10Q7Z4F1 713 aa21.4■■□□□ 1.02
CCM2-205ENST00000472223 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
CCM2-205ENST00000472223 ANO8Q9HCE9 1232 aaPredicted RBP21.4■■□□□ 1.02
CCM2-205ENST00000472223 MAP3K2Q9Y2U5 619 aa21.39■■□□□ 1.01
CCM2-205ENST00000472223 RGL2O15211 777 aa21.38■■□□□ 1.01
CCM2-205ENST00000472223 SLC4A10Q6U841 1118 aa21.38■■□□□ 1.01
CCM2-205ENST00000472223 CLEC4GQ6UXB4 293 aa21.38■■□□□ 1.01
CCM2-205ENST00000472223 DNAAF4Q8WXU2 420 aa21.38■■□□□ 1.01
CCM2-205ENST00000472223 SUPT16HQ9Y5B9 1047 aaKnown RBP21.38■■□□□ 1.01
CCM2-205ENST00000472223 USPL1Q5W0Q7 1092 aa21.37■■□□□ 1.01
CCM2-205ENST00000472223 COL23A1Q86Y22 540 aaPredicted RBP21.37■■□□□ 1.01
CCM2-205ENST00000472223 PNPLA7Q6ZV29 1317 aa21.36■■□□□ 1.01
CCM2-205ENST00000472223 USP42Q9H9J4 1324 aaKnown RBP21.36■■□□□ 1.01
CCM2-205ENST00000472223 QSER1Q2KHR3 1735 aa21.36■■□□□ 1.01
CCM2-205ENST00000472223 GIGYF2Q6Y7W6 1299 aaKnown RBP21.36■■□□□ 1.01
CCM2-205ENST00000472223 SMIM5Q71RC9 77 aa21.36■■□□□ 1.01
CCM2-205ENST00000472223 CAMTA2O94983 1202 aa21.35■■□□□ 1.01
CCM2-205ENST00000472223 RRP1P56182 461 aaKnown RBP21.35■■□□□ 1.01
CCM2-205ENST00000472223 DZIP1LQ8IYY4 767 aaKnown RBP21.35■■□□□ 1.01
CCM2-205ENST00000472223 NLGN1Q8N2Q7 840 aa21.35■■□□□ 1.01
CCM2-205ENST00000472223 METTL22Q9BUU2 404 aaPredicted RBP21.35■■□□□ 1.01
CCM2-205ENST00000472223 CCT4P50991 539 aaKnown RBP21.34■■□□□ 1.01
CCM2-205ENST00000472223 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
CCM2-205ENST00000472223 SLC16A10Q8TF71 515 aa21.34■■□□□ 1.01
CCM2-205ENST00000472223 MYD88Q99836 296 aa21.34■■□□□ 1.01
CCM2-205ENST00000472223 SRP68Q9UHB9 627 aaKnown RBP21.34■■□□□ 1.01
CCM2-205ENST00000472223 TUBGCP6Q96RT7 1819 aa21.34■■□□□ 1.01
CCM2-205ENST00000472223 F6X3S4 739 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 PLIN1O60240 522 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 TRIM27P14373 513 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 TCIRG1Q13488 830 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 AMIGO3Q86WK7 504 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 CLUAP1Q96AJ1 413 aa21.33■■□□□ 1.01
CCM2-205ENST00000472223 C4AP0C0L4 1744 aa21.32■■□□□ 1
CCM2-205ENST00000472223 PDE3AQ14432 1141 aa21.32■■□□□ 1
CCM2-205ENST00000472223 HLFQ16534 295 aa21.32■■□□□ 1
CCM2-205ENST00000472223 SETDB2Q96T68 719 aa21.32■■□□□ 1
CCM2-205ENST00000472223 SRCIN1Q9C0H9 1055 aa21.32■■□□□ 1
CCM2-205ENST00000472223 ARFGEF2Q9Y6D5 1785 aa21.32■■□□□ 1
CCM2-205ENST00000472223 ADCY9O60503 1353 aa21.32■■□□□ 1
CCM2-205ENST00000472223 NUP98P52948 1817 aa21.32■■□□□ 1
CCM2-205ENST00000472223 LINS1Q8NG48 757 aa21.31■■□□□ 1
CCM2-205ENST00000472223 NIP7Q9Y221 180 aaKnown RBP eCLIP21.31■■□□□ 1
CCM2-205ENST00000472223 NPHP1O15259 732 aa21.3■■□□□ 1
CCM2-205ENST00000472223 GYS1P13807 737 aa21.3■■□□□ 1
CCM2-205ENST00000472223 PARP10Q53GL7 1025 aa21.3■■□□□ 1
CCM2-205ENST00000472223 BICDL1Q6ZP65 573 aa21.3■■□□□ 1
CCM2-205ENST00000472223 CHMP4BQ9H444 224 aaKnown RBP21.3■■□□□ 1
CCM2-205ENST00000472223 BCORQ6W2J9 1755 aa21.3■■□□□ 1
CCM2-205ENST00000472223 SCN7AQ01118 1682 aa21.29■■□□□ 1
CCM2-205ENST00000472223 PPP1R42Q7Z4L9 355 aa21.29■■□□□ 1
CCM2-205ENST00000472223 CCDC191Q8NCU4 936 aa21.29■■□□□ 1
CCM2-205ENST00000472223 ABCC4O15439 1325 aa21.29■■□□□ 1
CCM2-205ENST00000472223 PXDNLA1KZ92 1463 aa21.28■■□□□ 1
CCM2-205ENST00000472223 PSDA5PKW4 1024 aaPredicted RBP21.28■■□□□ 1
CCM2-205ENST00000472223 ATP5J2-PTCD1G3V325 749 aa21.28■■□□□ 1
CCM2-205ENST00000472223 ALDH1L1O75891 902 aa21.28■■□□□ 1
CCM2-205ENST00000472223 NEFLP07196 543 aa21.28■■□□□ 1
CCM2-205ENST00000472223 GPTP24298 496 aa21.28■■□□□ 1
CCM2-205ENST00000472223 ITPRIPQ8IWB1 547 aa21.28■■□□□ 1
CCM2-205ENST00000472223 CWC25Q9NXE8 425 aaPredicted RBP21.28■■□□□ 1
CCM2-205ENST00000472223 GTF2E1P29083 439 aaPredicted RBP21.27■■□□□ 1
CCM2-205ENST00000472223 TRIM28Q13263 835 aaKnown RBP21.27■■□□□ 1
CCM2-205ENST00000472223 FKBP8Q14318 412 aa21.27■■□□□ 1
CCM2-205ENST00000472223 BEND3Q5T5X7 828 aa21.27■■□□□ 1
CCM2-205ENST00000472223 INTS3Q68E01 1043 aaKnown RBP21.27■■□□□ 1
CCM2-205ENST00000472223 NYXQ9GZU5 481 aa21.27■■□□□ 1
CCM2-205ENST00000472223 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
CCM2-205ENST00000472223 HDAC5Q9UQL6 1122 aa21.27■■□□□ 1
CCM2-205ENST00000472223 ATP10DQ9P241 1426 aa21.27■■□□□ 1
CCM2-205ENST00000472223 ANKRD36CQ5JPF3 1778 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 TBC1D9BQ66K14 1250 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 ZNF34Q8IZ26 560 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 ISCA1Q9BUE6 129 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 BCL2L12Q9HB09 334 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 PARP3Q9Y6F1 533 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
CCM2-205ENST00000472223 AFDNP55196 1824 aaKnown RBP21.25■□□□□ 0.99
CCM2-205ENST00000472223 NEURL1BA8MQ27 555 aa21.25■□□□□ 0.99
CCM2-205ENST00000472223 HSP90B1P14625 803 aaKnown RBP21.25■□□□□ 0.99
CCM2-205ENST00000472223 TPTE2Q6XPS3 522 aa21.25■□□□□ 0.99
CCM2-205ENST00000472223 TMEM57Q8N5G2 664 aa21.25■□□□□ 0.99
CCM2-205ENST00000472223 PANK1Q8TE04 598 aa21.25■□□□□ 0.99
CCM2-205ENST00000472223 POLD1P28340 1107 aa21.24■□□□□ 0.99
CCM2-205ENST00000472223 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
CCM2-205ENST00000472223 MSL1Q68DK7 614 aa21.24■□□□□ 0.99
CCM2-205ENST00000472223 NBPF5PQ86XG9 351 aaPredicted RBP21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms