RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 FLIIQ13045 1269 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 ZNF428Q96B54 188 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 ZBTB3Q9H5J0 574 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 SMC4Q9NTJ3 1288 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 NUP98P52948 1817 aa18.78■□□□□ 0.6
SMARCD3-207ENST00000472103 MAP3K15Q6ZN16 1313 aa18.77■□□□□ 0.6
SMARCD3-207ENST00000472103 MSL1Q68DK7 614 aa18.77■□□□□ 0.6
SMARCD3-207ENST00000472103 CHMP4AQ9BY43 222 aa18.77■□□□□ 0.6
SMARCD3-207ENST00000472103 ARFGEF2Q9Y6D5 1785 aa18.77■□□□□ 0.6
SMARCD3-207ENST00000472103 FKBP8Q14318 412 aa18.76■□□□□ 0.59
SMARCD3-207ENST00000472103 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
SMARCD3-207ENST00000472103 ADCY9O60503 1353 aa18.76■□□□□ 0.59
SMARCD3-207ENST00000472103 ZPR1O75312 459 aa18.75■□□□□ 0.59
SMARCD3-207ENST00000472103 ZBTB7AO95365 584 aa18.75■□□□□ 0.59
SMARCD3-207ENST00000472103 KIF6Q6ZMV9 814 aa18.75■□□□□ 0.59
SMARCD3-207ENST00000472103 BRPF1P55201 1214 aaPredicted RBP18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 ANKRD13DQ6ZTN6 518 aa18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 PLBD2Q8NHP8 589 aa18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 RCAN3Q9UKA8 241 aa18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 TNNQ9UQP3 1299 aa18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 COL24A1Q17RW2 1714 aa18.74■□□□□ 0.59
SMARCD3-207ENST00000472103 PI4KAP2A4QPH2 592 aa18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 ERVV-1B6SEH8 477 aa18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 F6X3S4 739 aa18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 TBC1D9BQ66K14 1250 aa18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 PI4KAP1Q8N8J0 262 aa18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 NOB1Q9ULX3 412 aaKnown RBP18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 ATF5Q9Y2D1 282 aaPredicted RBP18.73■□□□□ 0.59
SMARCD3-207ENST00000472103 GIGYF2Q6Y7W6 1299 aaKnown RBP18.72■□□□□ 0.59
SMARCD3-207ENST00000472103 SLC16A10Q8TF71 515 aa18.72■□□□□ 0.59
SMARCD3-207ENST00000472103 MAP3K2Q9Y2U5 619 aa18.72■□□□□ 0.59
SMARCD3-207ENST00000472103 ANKRD36CQ5JPF3 1778 aa18.72■□□□□ 0.59
SMARCD3-207ENST00000472103 NFIXQ14938 502 aa18.71■□□□□ 0.59
SMARCD3-207ENST00000472103 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
SMARCD3-207ENST00000472103 BICDL1Q6ZP65 573 aa18.71■□□□□ 0.59
SMARCD3-207ENST00000472103 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
SMARCD3-207ENST00000472103 TM4SF1P30408 202 aa18.7■□□□□ 0.58
SMARCD3-207ENST00000472103 DDR1Q08345 913 aa18.7■□□□□ 0.58
SMARCD3-207ENST00000472103 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 DDX58O95786 925 aaKnown RBP18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 GPTP24298 496 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 TCIRG1Q13488 830 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 CLEC4GQ6UXB4 293 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 ZNF34Q8IZ26 560 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 FRAT1Q92837 279 aaPredicted RBP18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 MYD88Q99836 296 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 UBN2Q6ZU65 1347 aa18.69■□□□□ 0.58
SMARCD3-207ENST00000472103 ATP10DQ9P241 1426 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 NLGN1Q8N2Q7 840 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 DNAAF4Q8WXU2 420 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 SGIP1Q9BQI5 828 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 ISCA1Q9BUE6 129 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 METTL22Q9BUU2 404 aaPredicted RBP18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 PTPRCP08575 1304 aa18.68■□□□□ 0.58
SMARCD3-207ENST00000472103 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 RGL2O15211 777 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 PLIN1O60240 522 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 IGKV5-2P06315 115 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 MMP10P09238 476 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 NIP7Q9Y221 180 aaKnown RBP eCLIP18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 KIF16BQ96L93 1317 aa18.67■□□□□ 0.58
SMARCD3-207ENST00000472103 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
SMARCD3-207ENST00000472103 TRIM27P14373 513 aa18.66■□□□□ 0.58
SMARCD3-207ENST00000472103 PTGER2P43116 358 aa18.66■□□□□ 0.58
SMARCD3-207ENST00000472103 FAM177BA6PVY3 158 aa18.65■□□□□ 0.58
SMARCD3-207ENST00000472103 CWF19L2Q2TBE0 894 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-207ENST00000472103 BEND3Q5T5X7 828 aa18.65■□□□□ 0.58
SMARCD3-207ENST00000472103 SUSD4Q5VX71 490 aa18.65■□□□□ 0.58
SMARCD3-207ENST00000472103 NRXN2Q9P2S2 1712 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 HSP90AB3PQ58FF7 597 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 ATF7IPQ6VMQ6 1270 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 NLRP10Q86W26 655 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 CLUAP1Q96AJ1 413 aa18.64■□□□□ 0.57
SMARCD3-207ENST00000472103 SERPINB2P05120 415 aa18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 ZKSCAN2Q63HK3 967 aa18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 CCDC24Q8N4L8 307 aa18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 SETDB2Q96T68 719 aa18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 N4BP2Q86UW6 1770 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-207ENST00000472103 NEURL1BA8MQ27 555 aa18.62■□□□□ 0.57
SMARCD3-207ENST00000472103 RLBP1P12271 317 aa18.62■□□□□ 0.57
SMARCD3-207ENST00000472103 JARID2Q92833 1246 aaPredicted RBP18.62■□□□□ 0.57
SMARCD3-207ENST00000472103 SPON1Q9HCB6 807 aa18.62■□□□□ 0.57
SMARCD3-207ENST00000472103 ABCC4O15439 1325 aa18.62■□□□□ 0.57
SMARCD3-207ENST00000472103 PXDNLA1KZ92 1463 aa18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 CARMIL3Q8ND23 1372 aa18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 NTSR2O95665 410 aa18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 TRIM28Q13263 835 aaKnown RBP18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 SYNE4Q8N205 404 aa18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
SMARCD3-207ENST00000472103 IPO8O15397 1037 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-207ENST00000472103 C20orf194Q5TEA3 1177 aa18.6■□□□□ 0.57
SMARCD3-207ENST00000472103 NUTM1Q86Y26 1132 aa18.6■□□□□ 0.57
SMARCD3-207ENST00000472103 LINS1Q8NG48 757 aa18.6■□□□□ 0.57
SMARCD3-207ENST00000472103 POLD1P28340 1107 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms