RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CAPN12Q6ZSI9 719 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 TXNDC2Q86VQ3 553 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 SLC16A10Q8TF71 515 aa8.51□□□□□ -1.05
CDHR3-208ENST00000471910 GTF3C2Q8WUA4 911 aaPredicted RBP8.51□□□□□ -1.05
CDHR3-208ENST00000471910 DGKZQ13574 1117 aa8.5□□□□□ -1.05
CDHR3-208ENST00000471910 SV2AQ7L0J3 742 aa8.5□□□□□ -1.05
CDHR3-208ENST00000471910 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
CDHR3-208ENST00000471910 GNEQ9Y223 722 aaKnown RBP8.5□□□□□ -1.05
CDHR3-208ENST00000471910 CDC14CA4D256 554 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 SF3B2Q13435 895 aaKnown RBP8.49□□□□□ -1.05
CDHR3-208ENST00000471910 DBN1Q16643 649 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 LRRC69Q6ZNQ3 347 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 HELQQ8TDG4 1101 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 C7orf43Q8WVR3 580 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 SAP130Q9H0E3 1048 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
CDHR3-208ENST00000471910 ZBTB7CA1YPR0 619 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 ABTB2Q8N961 1025 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 IFT43Q96FT9 208 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 STIM2Q9P246 746 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
CDHR3-208ENST00000471910 TGFBR3LH3BV60 316 aa8.47□□□□□ -1.05
CDHR3-208ENST00000471910 FKBP4Q02790 459 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDHR3-208ENST00000471910 VWA5B2Q8N398 1253 aa8.47□□□□□ -1.05
CDHR3-208ENST00000471910 NANOS1Q8WY41 292 aaKnown RBP8.47□□□□□ -1.05
CDHR3-208ENST00000471910 ZCCHC2Q9C0B9 1178 aaKnown RBP8.47□□□□□ -1.05
CDHR3-208ENST00000471910 CUEDC1Q9NWM3 386 aaPredicted RBP8.47□□□□□ -1.05
CDHR3-208ENST00000471910 PHF24Q9UPV7 400 aa8.47□□□□□ -1.05
CDHR3-208ENST00000471910 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
CDHR3-208ENST00000471910 TERTO14746 1132 aaKnown RBP8.46□□□□□ -1.06
CDHR3-208ENST00000471910 ATXN7O15265 892 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-208ENST00000471910 FAM13AO94988 1023 aa8.46□□□□□ -1.06
CDHR3-208ENST00000471910 SERPINB4P48594 390 aa8.46□□□□□ -1.06
CDHR3-208ENST00000471910 IER5Q5VY09 327 aa8.46□□□□□ -1.06
CDHR3-208ENST00000471910 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-208ENST00000471910 HSH2DQ96JZ2 352 aa8.46□□□□□ -1.06
CDHR3-208ENST00000471910 PCDHGC4Q9Y5F7 938 aa8.46□□□□□ -1.06
CDHR3-208ENST00000471910 DNMT3AQ9Y6K1 912 aaPredicted RBP8.46□□□□□ -1.06
CDHR3-208ENST00000471910 H3BM21 787 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 VEGFBP49765 207 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 SAMD5Q5TGI4 173 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 ALKBH2Q6NS38 261 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 GLYCTKQ8IVS8 523 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 ZNF280CQ8ND82 737 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
CDHR3-208ENST00000471910 CEP63Q96MT8 703 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 FAM13BQ9NYF5 915 aa8.45□□□□□ -1.06
CDHR3-208ENST00000471910 ICMTO60725 284 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 MICAL2O94851 1124 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 ZNF211Q13398 564 aaPredicted RBP8.44□□□□□ -1.06
CDHR3-208ENST00000471910 AAMPQ13685 434 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
CDHR3-208ENST00000471910 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 TREML1Q86YW5 311 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 CFHR5Q9BXR6 569 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 ANO2Q9NQ90 1003 aa8.44□□□□□ -1.06
CDHR3-208ENST00000471910 TNFRSF10BO14763 440 aa8.43□□□□□ -1.06
CDHR3-208ENST00000471910 KHNYNO15037 678 aaKnown RBP8.43□□□□□ -1.06
CDHR3-208ENST00000471910 EPB42P16452 691 aa8.43□□□□□ -1.06
CDHR3-208ENST00000471910 IRF7Q92985 503 aa8.43□□□□□ -1.06
CDHR3-208ENST00000471910 H3BRB1 525 aa8.42□□□□□ -1.06
CDHR3-208ENST00000471910 FAM157BP0CG42 384 aa8.42□□□□□ -1.06
CDHR3-208ENST00000471910 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
CDHR3-208ENST00000471910 LAMC2Q13753 1193 aa8.42□□□□□ -1.06
CDHR3-208ENST00000471910 TUT1Q9H6E5 874 aaKnown RBP8.42□□□□□ -1.06
CDHR3-208ENST00000471910 ATXN7L1Q9ULK2 861 aaPredicted RBP8.42□□□□□ -1.06
CDHR3-208ENST00000471910 BCS1LQ9Y276 419 aa8.42□□□□□ -1.06
CDHR3-208ENST00000471910 SOWAHDA6NJG2 315 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 THBS1P07996 1170 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 NPR3P17342 541 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 MPSTP25325 297 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 IDH3AP50213 366 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 ARSDP51689 593 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 BRD7Q9NPI1 651 aa8.41□□□□□ -1.06
CDHR3-208ENST00000471910 BIN2Q9UBW5 565 aaPredicted RBP8.41□□□□□ -1.06
CDHR3-208ENST00000471910 DCDC2BA2VCK2 349 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 BNIP3LO60238 219 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 MAPTP10636 758 aaKnown RBP8.4□□□□□ -1.06
CDHR3-208ENST00000471910 PCSK2P16519 638 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 ZAP70P43403 619 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 TNP2Q05952 138 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 TYRO3Q06418 890 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 UBAP2LQ14157 1087 aaKnown RBP8.4□□□□□ -1.06
CDHR3-208ENST00000471910 ETFBKMTQ8IXQ9 262 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 TTC16Q8NEE8 873 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 PIK3R5Q8WYR1 880 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 KLRG1Q96E93 195 aa8.4□□□□□ -1.06
CDHR3-208ENST00000471910 DMGDHQ9UI17 866 aaKnown RBP8.4□□□□□ -1.06
CDHR3-208ENST00000471910 GPR25O00155 361 aa8.39□□□□□ -1.07
CDHR3-208ENST00000471910 EIF1AXP47813 144 aaKnown RBP8.39□□□□□ -1.07
CDHR3-208ENST00000471910 ABHD17AQ96GS6 310 aa8.39□□□□□ -1.07
CDHR3-208ENST00000471910 NDFIP2Q9NV92 336 aa8.39□□□□□ -1.07
CDHR3-208ENST00000471910 MARK1Q9P0L2 795 aa8.39□□□□□ -1.07
CDHR3-208ENST00000471910 NSFL1CQ9UNZ2 370 aaKnown RBP8.39□□□□□ -1.07
CDHR3-208ENST00000471910 KCNH4Q9UQ05 1017 aa8.39□□□□□ -1.07
CDHR3-208ENST00000471910 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
CDHR3-208ENST00000471910 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
CDHR3-208ENST00000471910 FGFR3P22607 806 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms