RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 GPR25O00155 361 aa9.84□□□□□ -0.83
HDAC9-221ENST00000471887 UBAP2LQ14157 1087 aaKnown RBP9.84□□□□□ -0.83
HDAC9-221ENST00000471887 LCE2AQ5TA79 106 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-221ENST00000471887 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
HDAC9-221ENST00000471887 B4GALNT3Q6L9W6 998 aa9.84□□□□□ -0.83
HDAC9-221ENST00000471887 LRRC69Q6ZNQ3 347 aa9.84□□□□□ -0.83
HDAC9-221ENST00000471887 ZCCHC2Q9C0B9 1178 aaKnown RBP9.84□□□□□ -0.83
HDAC9-221ENST00000471887 QTRT2Q9H974 415 aaKnown RBP9.84□□□□□ -0.83
HDAC9-221ENST00000471887 PHF24Q9UPV7 400 aa9.84□□□□□ -0.83
HDAC9-221ENST00000471887 GMPRP36959 345 aa9.83□□□□□ -0.84
HDAC9-221ENST00000471887 MYO19Q96H55 970 aa9.83□□□□□ -0.84
HDAC9-221ENST00000471887 PCDHGC4Q9Y5F7 938 aa9.83□□□□□ -0.84
HDAC9-221ENST00000471887 ATXN7O15265 892 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-221ENST00000471887 SAMD5Q5TGI4 173 aa9.82□□□□□ -0.84
HDAC9-221ENST00000471887 SUSD3Q96L08 255 aa9.82□□□□□ -0.84
HDAC9-221ENST00000471887 CFHR5Q9BXR6 569 aa9.82□□□□□ -0.84
HDAC9-221ENST00000471887 COL25A1Q9BXS0 654 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-221ENST00000471887 C16orf46Q6P387 395 aa9.81□□□□□ -0.84
HDAC9-221ENST00000471887 HSH2DQ96JZ2 352 aa9.81□□□□□ -0.84
HDAC9-221ENST00000471887 ATXN7L1Q9ULK2 861 aaPredicted RBP9.81□□□□□ -0.84
HDAC9-221ENST00000471887 BNIP3LO60238 219 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 FAM157BP0CG42 384 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 DGKZQ13574 1117 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 CAPN12Q6ZSI9 719 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 KLRG1Q96E93 195 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 ABHD17AQ96GS6 310 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 NDFIP2Q9NV92 336 aa9.8□□□□□ -0.84
HDAC9-221ENST00000471887 DCDC2BA2VCK2 349 aa9.79□□□□□ -0.84
HDAC9-221ENST00000471887 NAA30Q147X3 362 aaPredicted RBP9.79□□□□□ -0.84
HDAC9-221ENST00000471887 C11orf91Q3C1V1 193 aa9.79□□□□□ -0.84
HDAC9-221ENST00000471887 COX20Q5RI15 118 aa9.79□□□□□ -0.84
HDAC9-221ENST00000471887 ZNF280CQ8ND82 737 aa9.79□□□□□ -0.84
HDAC9-221ENST00000471887 KLK14Q9P0G3 267 aa9.79□□□□□ -0.84
HDAC9-221ENST00000471887 KHNYNO15037 678 aaKnown RBP9.78□□□□□ -0.84
HDAC9-221ENST00000471887 GAS6Q14393 721 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 IER5Q5VY09 327 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 PHLDB3Q6NSJ2 640 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 CNTNAP3BQ96NU0 1288 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 CNTNAP3Q9BZ76 1288 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 MBIPQ9NS73 344 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 LRFN2Q9ULH4 789 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 MTMR7Q9Y216 660 aa9.78□□□□□ -0.84
HDAC9-221ENST00000471887 TGFBR3LH3BV60 316 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 MAPTP10636 758 aaKnown RBP9.77□□□□□ -0.85
HDAC9-221ENST00000471887 MX2P20592 715 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 FGFR3P22607 806 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 TNP2Q05952 138 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 RNFT1Q5M7Z0 435 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 CEP63Q96MT8 703 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 SAP130Q9H0E3 1048 aa9.77□□□□□ -0.85
HDAC9-221ENST00000471887 WIPF1O43516 503 aa9.76□□□□□ -0.85
HDAC9-221ENST00000471887 KRT76Q01546 638 aa9.76□□□□□ -0.85
HDAC9-221ENST00000471887 BTLAQ7Z6A9 289 aa9.76□□□□□ -0.85
HDAC9-221ENST00000471887 SEPT3Q9UH03 358 aa9.76□□□□□ -0.85
HDAC9-221ENST00000471887 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
HDAC9-221ENST00000471887 BCS1LQ9Y276 419 aa9.76□□□□□ -0.85
HDAC9-221ENST00000471887 EFSO43281 561 aa9.75□□□□□ -0.85
HDAC9-221ENST00000471887 SCNN1AP37088 669 aa9.75□□□□□ -0.85
HDAC9-221ENST00000471887 TYRO3Q06418 890 aa9.75□□□□□ -0.85
HDAC9-221ENST00000471887 LAMC2Q13753 1193 aa9.75□□□□□ -0.85
HDAC9-221ENST00000471887 BRD7Q9NPI1 651 aa9.75□□□□□ -0.85
HDAC9-221ENST00000471887 BRD2P25440 801 aaKnown RBP9.74□□□□□ -0.85
HDAC9-221ENST00000471887 SRSF11Q05519 484 aaKnown RBP9.74□□□□□ -0.85
HDAC9-221ENST00000471887 IFT43Q96FT9 208 aa9.74□□□□□ -0.85
HDAC9-221ENST00000471887 ARID4AP29374 1257 aaPredicted RBP9.73□□□□□ -0.85
HDAC9-221ENST00000471887 MARK1Q9P0L2 795 aa9.73□□□□□ -0.85
HDAC9-221ENST00000471887 MICAL2O94851 1124 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 BRD1O95696 1058 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 CD33P20138 364 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 MAP2K3P46734 347 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 FAM182BQ5T319 152 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 HELQQ8TDG4 1101 aa9.72□□□□□ -0.85
HDAC9-221ENST00000471887 GTF3C2Q8WUA4 911 aaPredicted RBP9.72□□□□□ -0.85
HDAC9-221ENST00000471887 DMGDHQ9UI17 866 aaKnown RBP9.72□□□□□ -0.85
HDAC9-221ENST00000471887 TNFRSF10BO14763 440 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 BMP4P12644 408 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 EPB42P16452 691 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 IDH3AP50213 366 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 CTBSQ01459 385 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 STIM2Q9P246 746 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 IGF1RP08069 1367 aa9.71□□□□□ -0.86
HDAC9-221ENST00000471887 ADAMTS2O95450 1211 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 ARSDP51689 593 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 KCNQ4P56696 695 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 SFSWAPQ12872 951 aaKnown RBP9.7□□□□□ -0.86
HDAC9-221ENST00000471887 TREML1Q86YW5 311 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 ABTB2Q8N961 1025 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 TRAIPQ9BWF2 469 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 HCN2Q9UL51 889 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 KCNH4Q9UQ05 1017 aa9.7□□□□□ -0.86
HDAC9-221ENST00000471887 INPP5BP32019 993 aa9.69□□□□□ -0.86
HDAC9-221ENST00000471887 INSM1Q01101 510 aaPredicted RBP9.69□□□□□ -0.86
HDAC9-221ENST00000471887 ETFBKMTQ8IXQ9 262 aa9.69□□□□□ -0.86
HDAC9-221ENST00000471887 ABL1P00519 1130 aa9.68□□□□□ -0.86
HDAC9-221ENST00000471887 SLURP2P0DP57 97 aa9.68□□□□□ -0.86
HDAC9-221ENST00000471887 DNMT3AQ9Y6K1 912 aaPredicted RBP9.68□□□□□ -0.86
HDAC9-221ENST00000471887 C2CD2LO14523 706 aa9.67□□□□□ -0.86
HDAC9-221ENST00000471887 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
HDAC9-221ENST00000471887 TXNDC2Q86VQ3 553 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms