RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 KIF6Q6ZMV9 814 aa19.3■□□□□ 0.68
SSR4-208ENST00000471880 BABAM1Q9NWV8 329 aa19.3■□□□□ 0.68
SSR4-208ENST00000471880 PIM2Q9P1W9 311 aa19.29■□□□□ 0.68
SSR4-208ENST00000471880 CCDC88AQ3V6T2 1871 aa19.28■□□□□ 0.68
SSR4-208ENST00000471880 CALD1Q05682 793 aaKnown RBP19.28■□□□□ 0.68
SSR4-208ENST00000471880 KRT24Q2M2I5 525 aa19.28■□□□□ 0.68
SSR4-208ENST00000471880 CNBD1Q8NA66 436 aa19.28■□□□□ 0.68
SSR4-208ENST00000471880 CHL1O00533 1208 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 DALRD3Q5D0E6 543 aaKnown RBP19.27■□□□□ 0.68
SSR4-208ENST00000471880 ARHGAP27Q6ZUM4 889 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 NBPF5PQ86XG9 351 aaPredicted RBP19.27■□□□□ 0.68
SSR4-208ENST00000471880 C2CD5Q86YS7 1000 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 FAM9BQ8IZU0 186 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 ZBTB3Q9H5J0 574 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 NIP7Q9Y221 180 aaKnown RBP eCLIP19.27■□□□□ 0.68
SSR4-208ENST00000471880 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
SSR4-208ENST00000471880 ADCY9O60503 1353 aa19.27■□□□□ 0.68
SSR4-208ENST00000471880 ANXA1P04083 346 aa19.26■□□□□ 0.67
SSR4-208ENST00000471880 ST5P78524 1137 aa19.26■□□□□ 0.67
SSR4-208ENST00000471880 H0YIN7 160 aa19.25■□□□□ 0.67
SSR4-208ENST00000471880 GTF2E1P29083 439 aaPredicted RBP19.25■□□□□ 0.67
SSR4-208ENST00000471880 HLFQ16534 295 aa19.25■□□□□ 0.67
SSR4-208ENST00000471880 PRR5LQ6MZQ0 368 aa19.25■□□□□ 0.67
SSR4-208ENST00000471880 TTLL7Q6ZT98 887 aa19.25■□□□□ 0.67
SSR4-208ENST00000471880 CFAP44Q96MT7 982 aa19.25■□□□□ 0.67
SSR4-208ENST00000471880 GNAI1P63096 354 aa19.24■□□□□ 0.67
SSR4-208ENST00000471880 AIMP1Q12904 312 aaKnown RBP19.24■□□□□ 0.67
SSR4-208ENST00000471880 CLEC4GQ6UXB4 293 aa19.24■□□□□ 0.67
SSR4-208ENST00000471880 ZNF622Q969S3 477 aaKnown RBP eCLIP19.24■□□□□ 0.67
SSR4-208ENST00000471880 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
SSR4-208ENST00000471880 ATP10DQ9P241 1426 aa19.24■□□□□ 0.67
SSR4-208ENST00000471880 PDE6BP35913 854 aa19.23■□□□□ 0.67
SSR4-208ENST00000471880 HDGFL1Q5TGJ6 251 aa19.23■□□□□ 0.67
SSR4-208ENST00000471880 ERBB4Q15303 1308 aa19.23■□□□□ 0.67
SSR4-208ENST00000471880 MAP3K15Q6ZN16 1313 aa19.23■□□□□ 0.67
SSR4-208ENST00000471880 ARFGEF2Q9Y6D5 1785 aa19.22■□□□□ 0.67
SSR4-208ENST00000471880 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
SSR4-208ENST00000471880 GPTP24298 496 aa19.22■□□□□ 0.67
SSR4-208ENST00000471880 PROSER3Q2NL68 480 aa19.22■□□□□ 0.67
SSR4-208ENST00000471880 IFT57Q9NWB7 429 aa19.22■□□□□ 0.67
SSR4-208ENST00000471880 ZNF219Q9P2Y4 722 aaPredicted RBP19.22■□□□□ 0.67
SSR4-208ENST00000471880 SLX4Q8IY92 1834 aa19.22■□□□□ 0.67
SSR4-208ENST00000471880 TNRC6CQ9HCJ0 1690 aaKnown RBP19.21■□□□□ 0.67
SSR4-208ENST00000471880 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
SSR4-208ENST00000471880 TPTE2Q6XPS3 522 aa19.2■□□□□ 0.66
SSR4-208ENST00000471880 LRP10Q7Z4F1 713 aa19.2■□□□□ 0.66
SSR4-208ENST00000471880 ZNF526Q8TF50 670 aaPredicted RBP19.2■□□□□ 0.66
SSR4-208ENST00000471880 BRIP1Q9BX63 1249 aa19.2■□□□□ 0.66
SSR4-208ENST00000471880 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
SSR4-208ENST00000471880 ANKRD36CQ5JPF3 1778 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 ERVV-1B6SEH8 477 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 PDIA6Q15084 440 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 TTLL6Q8N841 843 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 XAGE3Q8WTP9 111 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 FER1L6Q2WGJ9 1857 aa19.19■□□□□ 0.66
SSR4-208ENST00000471880 COPS6Q7L5N1 327 aa19.18■□□□□ 0.66
SSR4-208ENST00000471880 TSR2Q969E8 191 aaKnown RBP19.17■□□□□ 0.66
SSR4-208ENST00000471880 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
SSR4-208ENST00000471880 ZNF853P0CG23 659 aa19.16■□□□□ 0.66
SSR4-208ENST00000471880 NUTM1Q86Y26 1132 aa19.16■□□□□ 0.66
SSR4-208ENST00000471880 WWC1Q8IX03 1113 aa19.16■□□□□ 0.66
SSR4-208ENST00000471880 NYXQ9GZU5 481 aa19.16■□□□□ 0.66
SSR4-208ENST00000471880 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
SSR4-208ENST00000471880 RGL2O15211 777 aa19.15■□□□□ 0.66
SSR4-208ENST00000471880 HOXB7P09629 217 aa19.15■□□□□ 0.66
SSR4-208ENST00000471880 PRELPP51888 382 aa19.15■□□□□ 0.66
SSR4-208ENST00000471880 GIGYF2Q6Y7W6 1299 aaKnown RBP19.15■□□□□ 0.66
SSR4-208ENST00000471880 DBF4Q9UBU7 674 aaPredicted RBP19.15■□□□□ 0.66
SSR4-208ENST00000471880 DICER1Q9UPY3 1922 aaKnown RBP19.14■□□□□ 0.65
SSR4-208ENST00000471880 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
SSR4-208ENST00000471880 TIAM2Q8IVF5 1701 aa19.14■□□□□ 0.65
SSR4-208ENST00000471880 RASSF7Q02833 373 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 CCDC27Q2M243 656 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 ERFEQ4G0M1 354 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 PPP1R42Q7Z4L9 355 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 C8orf58Q8NAV2 365 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 UBN2Q6ZU65 1347 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 LAMB2P55268 1798 aa19.13■□□□□ 0.65
SSR4-208ENST00000471880 ABCC12Q96J65 1359 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 C21orf2O43822 256 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 SUSD4Q5VX71 490 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 C9orf131Q5VYM1 1079 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 CNKSR1Q969H4 720 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 MASTLQ96GX5 879 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 HYPKQ9NX55 129 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 RNF181Q9P0P0 153 aa19.12■□□□□ 0.65
SSR4-208ENST00000471880 SRGNP10124 158 aa19.11■□□□□ 0.65
SSR4-208ENST00000471880 STYK1Q6J9G0 422 aa19.11■□□□□ 0.65
SSR4-208ENST00000471880 GPBP1L1Q9HC44 474 aaPredicted RBP19.11■□□□□ 0.65
SSR4-208ENST00000471880 TCERG1O14776 1098 aaKnown RBP19.1■□□□□ 0.65
SSR4-208ENST00000471880 NPR1P16066 1061 aa19.1■□□□□ 0.65
SSR4-208ENST00000471880 PARP10Q53GL7 1025 aa19.1■□□□□ 0.65
SSR4-208ENST00000471880 ZNF34Q8IZ26 560 aa19.1■□□□□ 0.65
SSR4-208ENST00000471880 RPGRQ92834 1020 aaKnown RBP19.1■□□□□ 0.65
SSR4-208ENST00000471880 UTP14AQ9BVJ6 771 aaKnown RBP19.1■□□□□ 0.65
SSR4-208ENST00000471880 NFKBIEO00221 500 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 GOLGA2Q08379 1002 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
SSR4-208ENST00000471880 PRPF40BQ6NWY9 871 aaKnown RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms