RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 PRR12Q9ULL5 1215 aa5.12□□□□□ -1.59
SCN3A-207ENST00000471697 SIN3BO75182 1162 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 FBXO45P0C2W1 286 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 USP17L8P0C7I0 530 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 RBM25P49756 843 aaKnown RBP5.11□□□□□ -1.59
SCN3A-207ENST00000471697 MFAP1P55081 439 aaKnown RBP5.11□□□□□ -1.59
SCN3A-207ENST00000471697 SAMD5Q5TGI4 173 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 MICALL1Q8N3F8 863 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 TP53INP1Q96A56 240 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 CHMP4AQ9BY43 222 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 TRIM34Q9BYJ4 488 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 STARD13Q9Y3M8 1113 aa5.11□□□□□ -1.59
SCN3A-207ENST00000471697 A0A1W2PNR3 127 aa5.1□□□□□ -1.59
SCN3A-207ENST00000471697 KHNYNO15037 678 aaKnown RBP5.1□□□□□ -1.59
SCN3A-207ENST00000471697 EFSO43281 561 aa5.1□□□□□ -1.59
SCN3A-207ENST00000471697 AEBP1Q8IUX7 1158 aa5.1□□□□□ -1.59
SCN3A-207ENST00000471697 E9PSI1 815 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 MYCP01106 439 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-207ENST00000471697 ALBP02768 609 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 PLA2G4AP47712 749 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 IRAK1P51617 712 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 SYT9Q86SS6 491 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 SLC51AQ86UW1 340 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 FOXD4L4Q8WXT5 416 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-207ENST00000471697 TNFRSF25Q93038 417 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 MARK1Q9P0L2 795 aa5.09□□□□□ -1.59
SCN3A-207ENST00000471697 ATP1B4Q9UN42 357 aaPredicted RBP5.09□□□□□ -1.59
SCN3A-207ENST00000471697 SH3D19Q5HYK7 790 aa5.08□□□□□ -1.6
SCN3A-207ENST00000471697 C20orf204Q6ZNR8 217 aa5.08□□□□□ -1.6
SCN3A-207ENST00000471697 ZNF428Q96B54 188 aa5.08□□□□□ -1.6
SCN3A-207ENST00000471697 GZF1Q9H116 711 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-207ENST00000471697 STRN4Q9NRL3 753 aa5.08□□□□□ -1.6
SCN3A-207ENST00000471697 PCMTD2Q9NV79 361 aa5.08□□□□□ -1.6
SCN3A-207ENST00000471697 TLR1Q15399 786 aa5.07□□□□□ -1.6
SCN3A-207ENST00000471697 DDRGK1Q96HY6 314 aa5.07□□□□□ -1.6
SCN3A-207ENST00000471697 RNF114Q9Y508 228 aa5.07□□□□□ -1.6
SCN3A-207ENST00000471697 A0A0A0MRY4 1105 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 TAL1P17542 331 aaPredicted RBP5.06□□□□□ -1.6
SCN3A-207ENST00000471697 CD97P48960 835 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 C8orf86Q6ZUL3 223 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 ZIC5Q96T25 663 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 NIFKQ9BYG3 293 aaKnown RBP5.06□□□□□ -1.6
SCN3A-207ENST00000471697 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 ETNK1Q9HBU6 452 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 ZDHHC3Q9NYG2 299 aa5.06□□□□□ -1.6
SCN3A-207ENST00000471697 NR1H3Q13133 447 aa5.05□□□□□ -1.6
SCN3A-207ENST00000471697 ARSJQ5FYB0 599 aaPredicted RBP5.05□□□□□ -1.6
SCN3A-207ENST00000471697 TRAPPC3LQ5T215 181 aa5.05□□□□□ -1.6
SCN3A-207ENST00000471697 ILDR2Q71H61 639 aa5.05□□□□□ -1.6
SCN3A-207ENST00000471697 ZNF295-AS1Q8N0V1 137 aa5.05□□□□□ -1.6
SCN3A-207ENST00000471697 JAG1P78504 1218 aa5.04□□□□□ -1.6
SCN3A-207ENST00000471697 NBPF1Q3BBV0 1214 aa5.04□□□□□ -1.6
SCN3A-207ENST00000471697 TATP17735 454 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-207ENST00000471697 RAC1P63000 192 aa5.03□□□□□ -1.6
SCN3A-207ENST00000471697 SHISA2Q6UWI4 295 aa5.03□□□□□ -1.6
SCN3A-207ENST00000471697 CLUAP1Q96AJ1 413 aa5.03□□□□□ -1.6
SCN3A-207ENST00000471697 AIDAQ96BJ3 306 aa5.03□□□□□ -1.6
SCN3A-207ENST00000471697 CCDC85AQ96PX6 553 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-207ENST00000471697 CDCA7Q9BWT1 371 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-207ENST00000471697 SERPINA10Q9UK55 444 aa5.03□□□□□ -1.6
SCN3A-207ENST00000471697 ZNF330Q9Y3S2 320 aaPredicted RBP5.03□□□□□ -1.6
SCN3A-207ENST00000471697 KIAA1324LA8MWY0 1029 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-207ENST00000471697 LILRB5O75023 590 aa5.02□□□□□ -1.61
SCN3A-207ENST00000471697 ADH7P40394 386 aa5.02□□□□□ -1.61
SCN3A-207ENST00000471697 GJD4Q96KN9 370 aaPredicted RBP5.02□□□□□ -1.61
SCN3A-207ENST00000471697 OAS3Q9Y6K5 1087 aaKnown RBP5.02□□□□□ -1.61
SCN3A-207ENST00000471697 IRF5Q13568 498 aa5.01□□□□□ -1.61
SCN3A-207ENST00000471697 PRR23CQ6ZRP0 262 aa5.01□□□□□ -1.61
SCN3A-207ENST00000471697 FMR1NBQ8N0W7 255 aaPredicted RBP5.01□□□□□ -1.61
SCN3A-207ENST00000471697 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
SCN3A-207ENST00000471697 AMOTL2Q9Y2J4 779 aa5.01□□□□□ -1.61
SCN3A-207ENST00000471697 GJA3Q9Y6H8 435 aa5.01□□□□□ -1.61
SCN3A-207ENST00000471697 INHAP05111 366 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 SSTR4P31391 388 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 RFC5P40937 340 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 SCNN1DP51172 638 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 USP4Q13107 963 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 USP35Q9P2H5 1018 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 USP21Q9UK80 565 aa5□□□□□ -1.61
SCN3A-207ENST00000471697 STAU1O95793 577 aaKnown RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 BRD2P25440 801 aaKnown RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 SMTNP53814 917 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 GP2P55259 537 aaKnown RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 RETREG2Q8NC44 543 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 WFDC12Q8WWY7 111 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 PCMTD1Q96MG8 357 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 SLC30A3Q99726 388 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 GOPCQ9HD26 462 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 CEP126Q9P2H0 1117 aa4.99□□□□□ -1.61
SCN3A-207ENST00000471697 ZNF777Q9ULD5 760 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 IQSEC3Q9UPP2 1182 aaPredicted RBP4.99□□□□□ -1.61
SCN3A-207ENST00000471697 CDK2AP1O14519 115 aa4.98□□□□□ -1.61
SCN3A-207ENST00000471697 FSTP19883 344 aa4.98□□□□□ -1.61
SCN3A-207ENST00000471697 NEUROD1Q13562 356 aa4.98□□□□□ -1.61
SCN3A-207ENST00000471697 FAM177A1Q8N128 213 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-207ENST00000471697 FNBP4Q8N3X1 1017 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-207ENST00000471697 CCDC97Q96F63 343 aaPredicted RBP4.98□□□□□ -1.61
SCN3A-207ENST00000471697 SLC4A9Q96Q91 983 aa4.98□□□□□ -1.61
SCN3A-207ENST00000471697 GPC6Q9Y625 555 aaPredicted RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms