RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 HOXB7P09629 217 aa8□□□□□ -1.13
SPEN-204ENST00000471538 GSPT1P15170 499 aaKnown RBP8□□□□□ -1.13
SPEN-204ENST00000471538 MFAP1P55081 439 aaKnown RBP8□□□□□ -1.13
SPEN-204ENST00000471538 BECN1Q14457 450 aa8□□□□□ -1.13
SPEN-204ENST00000471538 NFKBIBQ15653 356 aa8□□□□□ -1.13
SPEN-204ENST00000471538 RTL5Q5HYW3 569 aaPredicted RBP8□□□□□ -1.13
SPEN-204ENST00000471538 AKAP4Q5JQC9 854 aa8□□□□□ -1.13
SPEN-204ENST00000471538 STK31Q9BXU1 1019 aa8□□□□□ -1.13
SPEN-204ENST00000471538 ANTXR1Q9H6X2 564 aa8□□□□□ -1.13
SPEN-204ENST00000471538 DAXXQ9UER7 740 aaPredicted RBP8□□□□□ -1.13
SPEN-204ENST00000471538 HEG1Q9ULI3 1381 aa8□□□□□ -1.13
SPEN-204ENST00000471538 EIF4A1P60842 406 aaKnown RBP7.99□□□□□ -1.13
SPEN-204ENST00000471538 AMOTQ4VCS5 1084 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 UNC5CLQ8IV45 518 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 ANKRD24Q8TF21 1146 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 LGR6Q9HBX8 967 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 AXIN2Q9Y2T1 843 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 PLEKHG2Q9H7P9 1386 aa7.99□□□□□ -1.13
SPEN-204ENST00000471538 ERBB3P21860 1342 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 DEKP35659 375 aaKnown RBP7.98□□□□□ -1.13
SPEN-204ENST00000471538 PLEKHO1Q53GL0 409 aaPredicted RBP7.98□□□□□ -1.13
SPEN-204ENST00000471538 TTC22Q5TAA0 569 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 TBC1D9Q6ZT07 1266 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 SEPT12Q8IYM1 358 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 CIZ1Q9ULV3 898 aaPredicted RBP7.98□□□□□ -1.13
SPEN-204ENST00000471538 BOLA1Q9Y3E2 137 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 SCN11AQ9UI33 1791 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 PKD1L3Q7Z443 1732 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 PLCH1Q4KWH8 1693 aa7.98□□□□□ -1.13
SPEN-204ENST00000471538 TNS3Q68CZ2 1445 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 SALL3Q9BXA9 1300 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 RNMTO43148 476 aaKnown RBP7.97□□□□□ -1.13
SPEN-204ENST00000471538 GNAI2P04899 355 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 FKBP5Q13451 457 aaPredicted RBP7.97□□□□□ -1.13
SPEN-204ENST00000471538 HDGFL1Q5TGJ6 251 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 ZNF530Q6P9A1 599 aaPredicted RBP7.97□□□□□ -1.13
SPEN-204ENST00000471538 SLC4A10Q6U841 1118 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 C16orf71Q8IYS4 520 aaPredicted RBP7.97□□□□□ -1.13
SPEN-204ENST00000471538 KIF2CQ99661 725 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 MRC1P22897 1456 aa7.97□□□□□ -1.13
SPEN-204ENST00000471538 KCNQ3O43525 872 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 ONECUT3O60422 494 aaPredicted RBP7.96□□□□□ -1.13
SPEN-204ENST00000471538 HMMRO75330 724 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 CDC45O75419 566 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 GNAI3P08754 354 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 OTUD7AQ8TE49 926 aaPredicted RBP7.96□□□□□ -1.13
SPEN-204ENST00000471538 SNX21Q969T3 373 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 OSBPL3Q9H4L5 887 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 ABCA3Q99758 1704 aa7.96□□□□□ -1.13
SPEN-204ENST00000471538 IBTKQ9P2D0 1353 aaPredicted RBP7.96□□□□□ -1.14
SPEN-204ENST00000471538 ZBTB7CA1YPR0 619 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 G3V3G9 751 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 SMARCA5O60264 1052 aaPredicted RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 ATP8B2P98198 1209 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 SPOCK2Q92563 424 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 NECTIN2Q92692 538 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 USP44Q9H0E7 712 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 PHAXQ9H814 394 aaKnown RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 MEGF6O75095 1541 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 KDM6AO15550 1401 aaPredicted RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 TNS1Q9HBL0 1735 aaKnown RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 PARP4Q9UKK3 1724 aaKnown RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 NWD2Q9ULI1 1742 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 ADCY9O60503 1353 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 CPDO75976 1380 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 C5P01031 1676 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 UTRNP46939 3433 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 SPATA31A3Q5VYP0 1347 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 PNMA6EA0A0J9YXQ4 647 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 BTBD11A6QL63 1104 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 DDIT3P35638 169 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 VPS72Q15906 364 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 DOK7Q18PE1 504 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 VARS2Q5ST30 1063 aaKnown RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 MPRIPQ6WCQ1 1025 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 IFNLR1Q8IU57 520 aaPredicted RBP7.95□□□□□ -1.14
SPEN-204ENST00000471538 CHPF2Q9P2E5 772 aa7.95□□□□□ -1.14
SPEN-204ENST00000471538 NRAPQ86VF7 1730 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 GIGYF1O75420 1035 aaPredicted RBP7.94□□□□□ -1.14
SPEN-204ENST00000471538 FRAT2O75474 233 aaPredicted RBP7.94□□□□□ -1.14
SPEN-204ENST00000471538 SDSP20132 328 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 EN1Q05925 392 aaPredicted RBP7.94□□□□□ -1.14
SPEN-204ENST00000471538 TEFQ10587 303 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 R3HDM1Q15032 1099 aaKnown RBP7.94□□□□□ -1.14
SPEN-204ENST00000471538 C1orf141Q5JVX7 400 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 FAM182BQ5T319 152 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 BEND3Q5T5X7 828 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 LMOD2Q6P5Q4 547 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 KRT27Q7Z3Y8 459 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 ZNF687Q8N1G0 1237 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 CABLES1Q8TDN4 633 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 SSH3Q8TE77 659 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 CHMP4AQ9BY43 222 aa7.94□□□□□ -1.14
SPEN-204ENST00000471538 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
SPEN-204ENST00000471538 PDE1AP54750 535 aa7.93□□□□□ -1.14
SPEN-204ENST00000471538 ZC3H6P61129 1189 aaKnown RBP7.93□□□□□ -1.14
SPEN-204ENST00000471538 SF3B2Q13435 895 aaKnown RBP7.93□□□□□ -1.14
SPEN-204ENST00000471538 SLKQ9H2G2 1235 aaPredicted RBP7.93□□□□□ -1.14
SPEN-204ENST00000471538 EXOC6BQ9Y2D4 811 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms