RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 DBF4Q9UBU7 674 aaPredicted RBP22.9■■□□□ 1.26
VPS72-204ENST00000471423 ZNF652Q9Y2D9 606 aa22.9■■□□□ 1.26
VPS72-204ENST00000471423 MAP3K15Q6ZN16 1313 aa22.89■■□□□ 1.26
VPS72-204ENST00000471423 EXOSC9Q06265 439 aaKnown RBP22.89■■□□□ 1.25
VPS72-204ENST00000471423 HLFQ16534 295 aa22.88■■□□□ 1.25
VPS72-204ENST00000471423 CLEC4GQ6UXB4 293 aa22.88■■□□□ 1.25
VPS72-204ENST00000471423 XAGE3Q8WTP9 111 aa22.88■■□□□ 1.25
VPS72-204ENST00000471423 ZBTB3Q9H5J0 574 aa22.88■■□□□ 1.25
VPS72-204ENST00000471423 C10orf71Q711Q0 1435 aa22.88■■□□□ 1.25
VPS72-204ENST00000471423 AFDNP55196 1824 aaKnown RBP22.87■■□□□ 1.25
VPS72-204ENST00000471423 AIMP1Q12904 312 aaKnown RBP22.87■■□□□ 1.25
VPS72-204ENST00000471423 COPS6Q7L5N1 327 aa22.87■■□□□ 1.25
VPS72-204ENST00000471423 NLGN2Q8NFZ4 835 aa22.87■■□□□ 1.25
VPS72-204ENST00000471423 CARMIL3Q8ND23 1372 aa22.87■■□□□ 1.25
VPS72-204ENST00000471423 NRXN2Q9P2S2 1712 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 ERVV-1B6SEH8 477 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 E9PSI1 815 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 RGL2O15211 777 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 CCDC30Q5VVM6 783 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 CD2APQ9Y5K6 639 aa22.86■■□□□ 1.25
VPS72-204ENST00000471423 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 SERPINB2P05120 415 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 HNRNPUQ00839 825 aaKnown RBP eCLIP22.85■■□□□ 1.25
VPS72-204ENST00000471423 CDCA7LQ96GN5 454 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 CHMP4AQ9BY43 222 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 HYPKQ9NX55 129 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 NUP98P52948 1817 aa22.85■■□□□ 1.25
VPS72-204ENST00000471423 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
VPS72-204ENST00000471423 SETDB2Q96T68 719 aa22.84■■□□□ 1.25
VPS72-204ENST00000471423 ATP10DQ9P241 1426 aa22.83■■□□□ 1.25
VPS72-204ENST00000471423 TCERG1O14776 1098 aaKnown RBP22.83■■□□□ 1.25
VPS72-204ENST00000471423 NIP7Q9Y221 180 aaKnown RBP eCLIP22.83■■□□□ 1.25
VPS72-204ENST00000471423 PHAXQ9H814 394 aaKnown RBP22.82■■□□□ 1.24
VPS72-204ENST00000471423 VAMP4O75379 141 aa22.81■■□□□ 1.24
VPS72-204ENST00000471423 GIGYF2Q6Y7W6 1299 aaKnown RBP22.81■■□□□ 1.24
VPS72-204ENST00000471423 STK31Q9BXU1 1019 aa22.81■■□□□ 1.24
VPS72-204ENST00000471423 KIAA1551Q9HCM1 1747 aa22.81■■□□□ 1.24
VPS72-204ENST00000471423 PXDNLA1KZ92 1463 aa22.8■■□□□ 1.24
VPS72-204ENST00000471423 GPTP24298 496 aa22.79■■□□□ 1.24
VPS72-204ENST00000471423 PRR5LQ6MZQ0 368 aa22.79■■□□□ 1.24
VPS72-204ENST00000471423 ANKRD36CQ5JPF3 1778 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 FAM177BA6PVY3 158 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 NBPF5PQ86XG9 351 aaPredicted RBP22.78■■□□□ 1.24
VPS72-204ENST00000471423 CNBD1Q8NA66 436 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 PLBD2Q8NHP8 589 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 GOLGB1Q14789 3259 aaKnown RBP22.78■■□□□ 1.24
VPS72-204ENST00000471423 N4BP2Q86UW6 1770 aaPredicted RBP22.78■■□□□ 1.24
VPS72-204ENST00000471423 UBN2Q6ZU65 1347 aa22.78■■□□□ 1.24
VPS72-204ENST00000471423 NPHP1O15259 732 aa22.77■■□□□ 1.24
VPS72-204ENST00000471423 ANKRD13DQ6ZTN6 518 aa22.77■■□□□ 1.24
VPS72-204ENST00000471423 CCDC24Q8N4L8 307 aa22.77■■□□□ 1.24
VPS72-204ENST00000471423 SLC4A2P04920 1241 aa22.76■■□□□ 1.23
VPS72-204ENST00000471423 TGFB2P61812 414 aa22.76■■□□□ 1.23
VPS72-204ENST00000471423 ZNF34Q8IZ26 560 aa22.76■■□□□ 1.23
VPS72-204ENST00000471423 TRMT2AQ8IZ69 625 aaKnown RBP22.76■■□□□ 1.23
VPS72-204ENST00000471423 HSP90AB3PQ58FF7 597 aa22.75■■□□□ 1.23
VPS72-204ENST00000471423 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
VPS72-204ENST00000471423 UTRNP46939 3433 aa22.75■■□□□ 1.23
VPS72-204ENST00000471423 A0A0G2JLW4 131 aa22.74■■□□□ 1.23
VPS72-204ENST00000471423 ST5P78524 1137 aa22.74■■□□□ 1.23
VPS72-204ENST00000471423 G2E3Q7L622 706 aa22.74■■□□□ 1.23
VPS72-204ENST00000471423 WWC3Q9ULE0 1092 aa22.74■■□□□ 1.23
VPS72-204ENST00000471423 DPEP1P16444 411 aa22.73■■□□□ 1.23
VPS72-204ENST00000471423 TCIRG1Q13488 830 aa22.73■■□□□ 1.23
VPS72-204ENST00000471423 RIC3Q7Z5B4 369 aa22.73■■□□□ 1.23
VPS72-204ENST00000471423 PELP1Q8IZL8 1130 aaKnown RBP22.73■■□□□ 1.23
VPS72-204ENST00000471423 IBTKQ9P2D0 1353 aaPredicted RBP22.73■■□□□ 1.23
VPS72-204ENST00000471423 DDX58O95786 925 aaKnown RBP22.72■■□□□ 1.23
VPS72-204ENST00000471423 CHRNA5P30532 468 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 PARP10Q53GL7 1025 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 SUSD4Q5VX71 490 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 TPTE2Q6XPS3 522 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 NYXQ9GZU5 481 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 ZBED9Q6R2W3 1325 aa22.72■■□□□ 1.23
VPS72-204ENST00000471423 CACNA1FO60840 1977 aa22.71■■□□□ 1.23
VPS72-204ENST00000471423 FLIIQ13045 1269 aa22.71■■□□□ 1.23
VPS72-204ENST00000471423 BRIP1Q9BX63 1249 aa22.71■■□□□ 1.23
VPS72-204ENST00000471423 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
VPS72-204ENST00000471423 DCAF8L1A6NGE4 600 aa22.7■■□□□ 1.22
VPS72-204ENST00000471423 NTSR2O95665 410 aa22.7■■□□□ 1.22
VPS72-204ENST00000471423 NLRP10Q86W26 655 aa22.7■■□□□ 1.22
VPS72-204ENST00000471423 NUTM1Q86Y26 1132 aa22.7■■□□□ 1.22
VPS72-204ENST00000471423 ADCY9O60503 1353 aa22.7■■□□□ 1.22
VPS72-204ENST00000471423 COL11A2P13942 1736 aaPredicted RBP22.7■■□□□ 1.22
VPS72-204ENST00000471423 BRCA1P38398 1863 aaKnown RBP22.7■■□□□ 1.22
VPS72-204ENST00000471423 DLEC1Q9Y238 1755 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 PI4KAP2A4QPH2 592 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 ATP5J2-PTCD1G3V325 749 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 KCNA3P22001 575 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 GTF2E1P29083 439 aaPredicted RBP22.69■■□□□ 1.22
VPS72-204ENST00000471423 GPR162Q16538 588 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 PI4KAP1Q8N8J0 262 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 MAP3K2Q9Y2U5 619 aa22.69■■□□□ 1.22
VPS72-204ENST00000471423 TNRC6CQ9HCJ0 1690 aaKnown RBP22.68■■□□□ 1.22
VPS72-204ENST00000471423 YBX3P16989 372 aaKnown RBP eCLIP22.68■■□□□ 1.221e-6■■□□□ 12.2
VPS72-204ENST00000471423 PDE6BP35913 854 aa22.68■■□□□ 1.22
VPS72-204ENST00000471423 ERFEQ4G0M1 354 aa22.68■■□□□ 1.22
VPS72-204ENST00000471423 KSR2Q6VAB6 950 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms