RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 LIAT1Q6ZQX7 453 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 L3MBTL2Q969R5 705 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 PUS7Q96PZ0 661 aaKnown RBP10.23□□□□□ -0.77
SMC5-202ENST00000471372 CFHR5Q9BXR6 569 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 FHDC1Q9C0D6 1143 aaPredicted RBP10.23□□□□□ -0.77
SMC5-202ENST00000471372 CABP1Q9NZU7 370 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 CLN3Q13286 438 aa10.22□□□□□ -0.77
SMC5-202ENST00000471372 NBPF15Q8N660 670 aa10.22□□□□□ -0.77
SMC5-202ENST00000471372 RNF34Q969K3 372 aa10.22□□□□□ -0.77
SMC5-202ENST00000471372 SLC19A1P41440 591 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 CENPCQ03188 943 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 CBLBQ13191 982 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 ALG1LQ6GMV1 187 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 EMID1Q96A84 441 aaPredicted RBP10.21□□□□□ -0.77
SMC5-202ENST00000471372 IFT43Q96FT9 208 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 MRGPRX2Q96LB1 330 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 PHACTR1Q9C0D0 580 aa10.21□□□□□ -0.77
SMC5-202ENST00000471372 METTL5Q9NRN9 209 aaKnown RBP10.21□□□□□ -0.77
SMC5-202ENST00000471372 USP5P45974 858 aa10.2□□□□□ -0.78
SMC5-202ENST00000471372 ORC1Q13415 861 aa10.2□□□□□ -0.78
SMC5-202ENST00000471372 TINF2Q9BSI4 451 aa10.2□□□□□ -0.78
SMC5-202ENST00000471372 GNA15P30679 374 aa10.19□□□□□ -0.78
SMC5-202ENST00000471372 ZNF76P36508 570 aa10.19□□□□□ -0.78
SMC5-202ENST00000471372 ITGAEP38570 1179 aa10.19□□□□□ -0.78
SMC5-202ENST00000471372 CSRNP1Q96S65 589 aa10.19□□□□□ -0.78
SMC5-202ENST00000471372 A6NHS1 94 aa10.18□□□□□ -0.78
SMC5-202ENST00000471372 WNT7AO00755 349 aa10.18□□□□□ -0.78
SMC5-202ENST00000471372 HSP90B1P14625 803 aaKnown RBP10.18□□□□□ -0.78
SMC5-202ENST00000471372 GPR152Q8TDT2 470 aa10.18□□□□□ -0.78
SMC5-202ENST00000471372 TGIF2Q9GZN2 237 aa10.18□□□□□ -0.78
SMC5-202ENST00000471372 MEN1O00255 615 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 SMARCA5O60264 1052 aaPredicted RBP10.17□□□□□ -0.78
SMC5-202ENST00000471372 TREML1Q86YW5 311 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 NUDT16Q96DE0 195 aaKnown RBP10.17□□□□□ -0.78
SMC5-202ENST00000471372 AGBL1Q96MI9 1066 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 TANGO6Q9C0B7 1094 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 GGNBP2Q9H3C7 697 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 ACBD3Q9H3P7 528 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 CCSER2Q9H7U1 834 aa10.17□□□□□ -0.78
SMC5-202ENST00000471372 CTSHP09668 335 aa10.16□□□□□ -0.78
SMC5-202ENST00000471372 PTGIRP43119 386 aa10.16□□□□□ -0.78
SMC5-202ENST00000471372 NNTQ13423 1086 aa10.16□□□□□ -0.78
SMC5-202ENST00000471372 PPARGC1BQ86YN6 1023 aaKnown RBP10.16□□□□□ -0.78
SMC5-202ENST00000471372 CAPN10Q9HC96 672 aa10.16□□□□□ -0.78
SMC5-202ENST00000471372 BCS1LQ9Y276 419 aa10.16□□□□□ -0.78
SMC5-202ENST00000471372 EIF1AYO14602 144 aaKnown RBP10.15□□□□□ -0.78
SMC5-202ENST00000471372 HMGB1P09429 215 aaKnown RBP10.15□□□□□ -0.78
SMC5-202ENST00000471372 TXLNAP40222 546 aa10.15□□□□□ -0.78
SMC5-202ENST00000471372 TNNI2P48788 182 aa10.15□□□□□ -0.78
SMC5-202ENST00000471372 C8orf34Q49A92 452 aa10.15□□□□□ -0.78
SMC5-202ENST00000471372 FBF1Q8TES7 1133 aa10.15□□□□□ -0.78
SMC5-202ENST00000471372 ALDH1A1P00352 501 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 SPRYD7Q5W111 196 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 TRIM67Q6ZTA4 783 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 Q6ZVU0 165 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 NLRP3Q96P20 1036 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 ZSCAN10Q96SZ4 725 aaPredicted RBP10.14□□□□□ -0.79
SMC5-202ENST00000471372 NIFKQ9BYG3 293 aaKnown RBP10.14□□□□□ -0.79
SMC5-202ENST00000471372 AK5Q9Y6K8 562 aa10.14□□□□□ -0.79
SMC5-202ENST00000471372 OPLAHO14841 1288 aa10.13□□□□□ -0.79
SMC5-202ENST00000471372 PCSK2P16519 638 aa10.13□□□□□ -0.79
SMC5-202ENST00000471372 RELBQ01201 579 aa10.13□□□□□ -0.79
SMC5-202ENST00000471372 ZNF598Q86UK7 904 aaKnown RBP10.13□□□□□ -0.79
SMC5-202ENST00000471372 ITPKCQ96DU7 683 aa10.13□□□□□ -0.79
SMC5-202ENST00000471372 CRELD1Q96HD1 420 aa10.13□□□□□ -0.79
SMC5-202ENST00000471372 C1orf53Q5VUE5 145 aa10.12□□□□□ -0.79
SMC5-202ENST00000471372 TMEM214Q6NUQ4 689 aaKnown RBP10.12□□□□□ -0.79
SMC5-202ENST00000471372 SLC43A3Q8NBI5 491 aa10.12□□□□□ -0.79
SMC5-202ENST00000471372 SPATA32Q96LK8 384 aa10.12□□□□□ -0.79
SMC5-202ENST00000471372 ZNF395Q9H8N7 513 aaPredicted RBP10.12□□□□□ -0.79
SMC5-202ENST00000471372 PRKAG2Q9UGJ0 569 aa10.12□□□□□ -0.79
SMC5-202ENST00000471372 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.12□□□□□ -0.79
SMC5-202ENST00000471372 ZNF697Q5TEC3 545 aa10.11□□□□□ -0.79
SMC5-202ENST00000471372 DPH6Q7L8W6 267 aa10.11□□□□□ -0.79
SMC5-202ENST00000471372 RHBDD1Q8TEB9 315 aa10.11□□□□□ -0.79
SMC5-202ENST00000471372 KLRG1Q96E93 195 aa10.11□□□□□ -0.79
SMC5-202ENST00000471372 DNAJC2Q99543 621 aaKnown RBP10.11□□□□□ -0.79
SMC5-202ENST00000471372 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
SMC5-202ENST00000471372 MICAL2O94851 1124 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 ZIC2O95409 532 aaPredicted RBP10.1□□□□□ -0.79
SMC5-202ENST00000471372 PKDCCQ504Y2 493 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 ZNF394Q53GI3 561 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 DHX38Q92620 1227 aaKnown RBP10.1□□□□□ -0.79
SMC5-202ENST00000471372 KLF16Q9BXK1 252 aaPredicted RBP10.1□□□□□ -0.79
SMC5-202ENST00000471372 DNAJC25Q9H1X3 360 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 PCDHGB7Q9Y5F8 929 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 WASF2Q9Y6W5 498 aa10.1□□□□□ -0.79
SMC5-202ENST00000471372 EIF4BP23588 611 aaKnown RBP10.09□□□□□ -0.79
SMC5-202ENST00000471372 PLA2G4AP47712 749 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 PRR20EP86478 221 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 PRR20CP86479 221 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 PRR20DP86480 221 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 PRR20BP86481 221 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 PRR20AP86496 221 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.09□□□□□ -0.79
SMC5-202ENST00000471372 PI16Q6UXB8 463 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 TTC16Q8NEE8 873 aa10.09□□□□□ -0.79
SMC5-202ENST00000471372 FRMD6Q96NE9 622 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms