RNA–Protein interactions for RNA: ENST00000471363.5

CACNA2D3-204, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-204ENST00000471363 SGSM2O43147 1006 aa7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 EPB41L2O43491 1005 aaKnown RBP7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 SURF6O75683 361 aaKnown RBP7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 TPM3P06753 285 aa7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 CCDC30Q5VVM6 783 aa7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 RASEFQ8IZ41 740 aa7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 ITSN1Q15811 1721 aa7.43□□□□□ -1.22
CACNA2D3-204ENST00000471363 SOS1Q07889 1333 aaPredicted RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 C3P01024 1663 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CLSTN1O94985 981 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 LARGE1O95461 756 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 MYCNP04198 464 aaPredicted RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CCDC192P0DO97 292 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CASTP20810 708 aaKnown RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 GJB2P29033 226 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CWC27Q6UX04 472 aaKnown RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CHMP3Q9Y3E7 222 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 MAP3K19Q56UN5 1328 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 ARHGEF10O15013 1369 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 HMGB1P09429 215 aaKnown RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 CNTROBQ8N137 903 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 LSG1Q9H089 658 aaKnown RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 SPG7Q9UQ90 795 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 TTC21BQ7Z4L5 1316 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 NUTM2FA1L443 756 aa7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 GTPBP4Q9BZE4 634 aaKnown RBP7.42□□□□□ -1.22
CACNA2D3-204ENST00000471363 PRR36Q9H6K5 1346 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 METP08581 1390 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 PTGS1P23219 599 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 U2AF2P26368 475 aaKnown RBP eCLIP7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 PSMD1Q99460 953 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 MTMR6Q9Y217 621 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 A2ML1A8K2U0 1454 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 PPP1R42Q7Z4L9 355 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 PI4K2BQ8TCG2 481 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 RHPN1Q8TCX5 695 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 JAKMIP1Q96N16 626 aaKnown RBP7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 USP44Q9H0E7 712 aa7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 RIMS1Q86UR5 1692 aaKnown RBP7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 SETD1AO15047 1707 aaKnown RBP7.41□□□□□ -1.22
CACNA2D3-204ENST00000471363 RAB11FIP3O75154 756 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 DRC7Q8IY82 874 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 SSH3Q8TE77 659 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 PDRG1Q9NUG6 133 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 RICTORQ6R327 1708 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 CLGNO14967 610 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 CAMK4Q16566 473 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 FAM200AQ8TCP9 573 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 DDX54Q8TDD1 881 aaKnown RBP7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 NUP62CLQ9H1M0 184 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 HYPKQ9NX55 129 aa7.4□□□□□ -1.22
CACNA2D3-204ENST00000471363 SRGAP3O43295 1099 aa7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 MAP3K11Q16584 847 aa7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 PRPF40BQ6NWY9 871 aaKnown RBP7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 LUZP1Q86V48 1076 aa7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 ANKRD7Q92527 254 aa7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 XRN1Q8IZH2 1706 aaKnown RBP7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 PEAK1Q9H792 1746 aa7.4□□□□□ -1.23
CACNA2D3-204ENST00000471363 TYRO3Q06418 890 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 GRIPAP1Q4V328 841 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 FERMT3Q86UX7 667 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 NECAB1Q8N987 351 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 KIF1BPQ96EK5 621 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 C16orf45Q96MC5 204 aaPredicted RBP7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 CYP46A1Q9Y6A2 500 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 ACEP12821 1306 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 OVOS2A0A0J9YW53 1432 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 OVOS2Q6IE36 1432 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 KRT85P78386 507 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 ADCK5Q3MIX3 580 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 CCDC186Q7Z3E2 898 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 CKAP2LQ8IYA6 745 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 ZSCAN31Q96LW9 406 aaPredicted RBP7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 SH2B1Q9NRF2 756 aaPredicted RBP7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 RGPD1P0DJD0 1748 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 FAM208AQ9UK61 1670 aaKnown RBP7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 CTIFO43310 598 aaKnown RBP7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 KIF20AO95235 890 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 LRMPQ12912 555 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 VPS53Q5VIR6 699 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 TTC6Q86TZ1 520 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 RUFY2Q8WXA3 655 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 MRVI1Q9Y6F6 885 aa7.39□□□□□ -1.23
CACNA2D3-204ENST00000471363 GOLGA6L4A6NEF3 574 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 LIG1P18858 919 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 PTH1RQ03431 593 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 LARP1BQ659C4 914 aaKnown RBP7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 FAM173BQ6P4H8 233 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 TRIM5Q9C035 493 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 TNMDQ9H2S6 317 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 KCNJ4P48050 445 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 AMPHP49418 695 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 POLA2Q14181 598 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 ME3Q16798 604 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 ANO6Q4KMQ2 910 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 PHAXQ9H814 394 aaKnown RBP7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 PRDM16Q9HAZ2 1276 aa7.38□□□□□ -1.23
CACNA2D3-204ENST00000471363 SPATA31D1Q6ZQQ2 1576 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms