RNA–Protein interactions for RNA: ENST00000470737.1

SEMA3F-208, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-208ENST00000470737 ZNF652Q9Y2D9 606 aa18.53■□□□□ 0.56
SEMA3F-208ENST00000470737 KCNQ3O43525 872 aa18.52■□□□□ 0.56
SEMA3F-208ENST00000470737 STYK1Q6J9G0 422 aa18.52■□□□□ 0.56
SEMA3F-208ENST00000470737 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.56
SEMA3F-208ENST00000470737 ARFGEF2Q9Y6D5 1785 aa18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 U2AF1L5P0DN76 240 aaPredicted RBP18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 U2AF1Q01081 240 aaKnown RBP eCLIP18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 NBPF5PQ86XG9 351 aaPredicted RBP18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 MASTLQ96GX5 879 aa18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 SLX4Q8IY92 1834 aa18.51■□□□□ 0.55
SEMA3F-208ENST00000470737 LTBP3Q9NS15 1303 aa18.5■□□□□ 0.55
SEMA3F-208ENST00000470737 SNRPA1P09661 255 aaKnown RBP18.5■□□□□ 0.55
SEMA3F-208ENST00000470737 PRPF40BQ6NWY9 871 aaKnown RBP18.5■□□□□ 0.55
SEMA3F-208ENST00000470737 CLEC4GQ6UXB4 293 aa18.5■□□□□ 0.55
SEMA3F-208ENST00000470737 USP16Q9Y5T5 823 aa18.5■□□□□ 0.55
SEMA3F-208ENST00000470737 SRGNP10124 158 aa18.49■□□□□ 0.55
SEMA3F-208ENST00000470737 PIP4K2AP48426 406 aaPredicted RBP18.49■□□□□ 0.55
SEMA3F-208ENST00000470737 POTECB2RU33 542 aa18.47■□□□□ 0.55
SEMA3F-208ENST00000470737 COL13A1Q5TAT6 717 aaPredicted RBP18.47■□□□□ 0.55
SEMA3F-208ENST00000470737 MCM10Q7L590 875 aa18.47■□□□□ 0.55
SEMA3F-208ENST00000470737 PRAMEF22A3QJZ6 481 aa18.46■□□□□ 0.55
SEMA3F-208ENST00000470737 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
SEMA3F-208ENST00000470737 NEFMP07197 916 aa18.46■□□□□ 0.55
SEMA3F-208ENST00000470737 CCDC93Q567U6 631 aa18.46■□□□□ 0.55
SEMA3F-208ENST00000470737 TPTE2Q6XPS3 522 aa18.46■□□□□ 0.55
SEMA3F-208ENST00000470737 IQCA1LA6NCM1 817 aa18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 NPR1P16066 1061 aa18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 CHADLQ6NUI6 762 aa18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 TNS4Q8IZW8 715 aa18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 NIP7Q9Y221 180 aaKnown RBP eCLIP18.45■□□□□ 0.54
SEMA3F-208ENST00000470737 RGL2O15211 777 aa18.44■□□□□ 0.54
SEMA3F-208ENST00000470737 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
SEMA3F-208ENST00000470737 FAM177BA6PVY3 158 aa18.43■□□□□ 0.54
SEMA3F-208ENST00000470737 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
SEMA3F-208ENST00000470737 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
SEMA3F-208ENST00000470737 GTF2E1P29083 439 aaPredicted RBP18.43■□□□□ 0.54
SEMA3F-208ENST00000470737 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
SEMA3F-208ENST00000470737 SCN4AP35499 1836 aa18.42■□□□□ 0.54
SEMA3F-208ENST00000470737 PCNTO95613 3336 aa18.42■□□□□ 0.54
SEMA3F-208ENST00000470737 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
SEMA3F-208ENST00000470737 LAMB4A4D0S4 1761 aa18.42■□□□□ 0.54
SEMA3F-208ENST00000470737 FKBP4Q02790 459 aaKnown RBP eCLIP18.41■□□□□ 0.54
SEMA3F-208ENST00000470737 CREBZFQ9NS37 354 aa18.41■□□□□ 0.54
SEMA3F-208ENST00000470737 NBPF26B4DH59 902 aa18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 CAPN15O75808 1086 aa18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 ALDH1B1P30837 517 aa18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 NBPF10Q6P3W6 841 aaKnown RBP18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 RTKN2Q8IZC4 609 aa18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 NBPF15Q8N660 670 aa18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 PNISRQ8TF01 805 aaKnown RBP18.4■□□□□ 0.54
SEMA3F-208ENST00000470737 KLRG2A4D1S0 409 aaPredicted RBP18.39■□□□□ 0.53
SEMA3F-208ENST00000470737 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
SEMA3F-208ENST00000470737 C7orf43Q8WVR3 580 aa18.39■□□□□ 0.53
SEMA3F-208ENST00000470737 NYXQ9GZU5 481 aa18.39■□□□□ 0.53
SEMA3F-208ENST00000470737 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 L3MBTL3Q96JM7 780 aaPredicted RBP18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 MKRN1Q9UHC7 482 aaKnown RBP18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 DLG5Q8TDM6 1919 aa18.38■□□□□ 0.53
SEMA3F-208ENST00000470737 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
SEMA3F-208ENST00000470737 KIF6Q6ZMV9 814 aa18.37■□□□□ 0.53
SEMA3F-208ENST00000470737 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
SEMA3F-208ENST00000470737 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
SEMA3F-208ENST00000470737 MIS18AQ9NYP9 233 aa18.37■□□□□ 0.53
SEMA3F-208ENST00000470737 NUP98P52948 1817 aa18.36■□□□□ 0.53
SEMA3F-208ENST00000470737 HLFQ16534 295 aa18.36■□□□□ 0.53
SEMA3F-208ENST00000470737 KDM3BQ7LBC6 1761 aa18.36■□□□□ 0.53
SEMA3F-208ENST00000470737 HACL1Q9UJ83 578 aa18.36■□□□□ 0.53
SEMA3F-208ENST00000470737 CLEC11AQ9Y240 323 aa18.36■□□□□ 0.53
SEMA3F-208ENST00000470737 IARSP41252 1262 aaKnown RBP18.35■□□□□ 0.53
SEMA3F-208ENST00000470737 ZNF541Q9H0D2 1346 aa18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 ERVV-1B6SEH8 477 aa18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 OLFM4Q6UX06 510 aa18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 SYNE4Q8N205 404 aa18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 JDP2Q8WYK2 163 aa18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 RPGRQ92834 1020 aaKnown RBP18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 RRP7AQ9Y3A4 280 aaKnown RBP18.34■□□□□ 0.53
SEMA3F-208ENST00000470737 MAP3K15Q6ZN16 1313 aa18.33■□□□□ 0.53
SEMA3F-208ENST00000470737 CC2D2BQ6DHV5 1058 aa18.33■□□□□ 0.52
SEMA3F-208ENST00000470737 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.52
SEMA3F-208ENST00000470737 CNTNAP1P78357 1384 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 PASKQ96RG2 1323 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 TMEM88BA6NKF7 163 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 EPHX2P34913 555 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 PNMA8AQ86V59 439 aaPredicted RBP18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 NUTM1Q86Y26 1132 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 PSMD1Q99460 953 aa18.32■□□□□ 0.52
SEMA3F-208ENST00000470737 MYL6BP14649 208 aa18.31■□□□□ 0.52
SEMA3F-208ENST00000470737 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
SEMA3F-208ENST00000470737 EIF4A1P60842 406 aaKnown RBP18.31■□□□□ 0.52
SEMA3F-208ENST00000470737 AIDAQ96BJ3 306 aa18.31■□□□□ 0.52
SEMA3F-208ENST00000470737 ABCC12Q96J65 1359 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 RNF123Q5XPI4 1314 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 FZD9O00144 591 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 CRY2Q49AN0 593 aa18.3■□□□□ 0.52
SEMA3F-208ENST00000470737 GRIPAP1Q4V328 841 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms