RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 MNS1Q8NEH6 495 aa11.16□□□□□ -0.62
UBE3C-205ENST00000470408 UTP14AQ9BVJ6 771 aaKnown RBP11.15□□□□□ -0.62
UBE3C-205ENST00000470408 SLAIN2Q9P270 581 aa11.15□□□□□ -0.62
UBE3C-205ENST00000470408 IL15P40933 162 aaPredicted RBP11.15□□□□□ -0.62
UBE3C-205ENST00000470408 TXLNBQ8N3L3 684 aa11.15□□□□□ -0.62
UBE3C-205ENST00000470408 A0A1W2PP64 1363 aa11.15□□□□□ -0.62
UBE3C-205ENST00000470408 F6X3S4 739 aa11.15□□□□□ -0.62
UBE3C-205ENST00000470408 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
UBE3C-205ENST00000470408 ODF2Q5BJF6 829 aa11.15□□□□□ -0.63
UBE3C-205ENST00000470408 BOLA2Q9H3K6 86 aa11.15□□□□□ -0.63
UBE3C-205ENST00000470408 ZNF213O14771 459 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 ZNF76P36508 570 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 XAGE3Q8WTP9 111 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 SMARCE1Q969G3 411 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 CABP5Q9NP86 173 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 MYO5CQ9NQX4 1742 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 PDE4BQ07343 736 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
UBE3C-205ENST00000470408 PRM3Q9NNZ6 103 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 LUC7LQ9NQ29 371 aaKnown RBP11.14□□□□□ -0.63
UBE3C-205ENST00000470408 HMG20BQ9P0W2 317 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 COL17A1Q9UMD9 1497 aaPredicted RBP11.14□□□□□ -0.63
UBE3C-205ENST00000470408 MAP3K19Q56UN5 1328 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 PARP10Q53GL7 1025 aa11.14□□□□□ -0.63
UBE3C-205ENST00000470408 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.637e-6■■■■□ 22.7
UBE3C-205ENST00000470408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.14□□□□□ -0.63
UBE3C-205ENST00000470408 CCP110O43303 1012 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 EYA1Q99502 592 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 EYA3Q99504 573 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 DNAI2Q9GZS0 605 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 TSPY26PQ9H489 355 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 GRM8O00222 908 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 RAB34Q9BZG1 259 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 ANKRD2Q9GZV1 360 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 PARP3Q9Y6F1 533 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 KIF5BP33176 963 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 HSP90B2PQ58FF3 399 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 CUL5Q93034 780 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 CRNKL1Q9BZJ0 848 aaKnown RBP11.13□□□□□ -0.63
UBE3C-205ENST00000470408 GRPEL1Q9HAV7 217 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 BTG4Q9NY30 223 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 NLRP1Q9C000 1473 aa11.13□□□□□ -0.63
UBE3C-205ENST00000470408 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
UBE3C-205ENST00000470408 MAP4K4O95819 1239 aaPredicted RBP11.12□□□□□ -0.63
UBE3C-205ENST00000470408 MTHFSDQ2M296 383 aaKnown RBP11.12□□□□□ -0.63
UBE3C-205ENST00000470408 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
UBE3C-205ENST00000470408 DZIP3Q86Y13 1208 aaKnown RBP11.12□□□□□ -0.63
UBE3C-205ENST00000470408 PLEKHG1Q9ULL1 1385 aa11.12□□□□□ -0.63
UBE3C-205ENST00000470408 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
UBE3C-205ENST00000470408 PLCG2P16885 1265 aa11.12□□□□□ -0.63
UBE3C-205ENST00000470408 STK32BQ9NY57 414 aa11.12□□□□□ -0.63
UBE3C-205ENST00000470408 NIP7Q9Y221 180 aaKnown RBP eCLIP11.12□□□□□ -0.63
UBE3C-205ENST00000470408 SBNO2Q9Y2G9 1366 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 ME1P48163 572 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 SYCP1Q15431 976 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 ZNF804AQ7Z570 1209 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 MPHOSPH6Q99547 160 aaKnown RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CCDC8Q9H0W5 538 aaPredicted RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CHPF2Q9P2E5 772 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CAVIN1Q6NZI2 390 aaKnown RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CATIPQ7Z7H3 387 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 FAM83GA6ND36 823 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 HDAC1Q13547 482 aaPredicted RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 TAF3Q5VWG9 929 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CABLES1Q8TDN4 633 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 ERCC4Q92889 916 aaPredicted RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CALRP27797 417 aaKnown RBP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 ATP2B3Q16720 1220 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 BMP2KLQ5H9B9 411 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
UBE3C-205ENST00000470408 DDX21Q9NR30 783 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE3C-205ENST00000470408 CDR1P51861 262 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 TFCP2L1Q9NZI6 479 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 ESPNB1AK53 854 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 TRIM21P19474 475 aaKnown RBP11.1□□□□□ -0.63
UBE3C-205ENST00000470408 CASTP20810 708 aaKnown RBP11.1□□□□□ -0.63
UBE3C-205ENST00000470408 ACSBG1Q96GR2 724 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
UBE3C-205ENST00000470408 PLXNC1O60486 1568 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 CCDC192P0DO97 292 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 STK3Q13188 491 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 SLC12A7Q9Y666 1083 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 TRAPPC3LQ5T215 181 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 NFATC2IPQ8NCF5 419 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 KDM5DQ9BY66 1539 aa11.1□□□□□ -0.63
UBE3C-205ENST00000470408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
UBE3C-205ENST00000470408 FIBPO43427 364 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 SMC2O95347 1197 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 ATP8B2P98198 1209 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 TTLL12Q14166 644 aaPredicted RBP11.09□□□□□ -0.63
UBE3C-205ENST00000470408 RHPN1Q8TCX5 695 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 ANKRD44Q8N8A2 993 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 MBD5Q9P267 1494 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 ADGBQ8N7X0 1667 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 RANBP6O60518 1105 aaKnown RBP11.09□□□□□ -0.63
UBE3C-205ENST00000470408 KIF20AO95235 890 aa11.09□□□□□ -0.63
UBE3C-205ENST00000470408 PRPF40BQ6NWY9 871 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms