RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 CYP2C19P33261 490 aa11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 PLA2G4DQ86XP0 818 aa11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 LRRC8AQ8IWT6 810 aa11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 NECTIN2Q92692 538 aa11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 JAKMIP1Q96N16 626 aaKnown RBP11.27□□□□□ -0.61
NHLRC3-203ENST00000470258 PNMA6EA0A0J9YXQ4 647 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 CCDC69A6NI79 296 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 G2E3Q7L622 706 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 C10orf67Q8IYJ2 551 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 SPATA32Q96LK8 384 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 RSPH14Q9UHP6 348 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 USP32Q8NFA0 1604 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 KIF24Q5T7B8 1368 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 A0A087WWV3 80 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 BECN2A8MW95 431 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 TEX35Q5T0J7 233 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 SLC20A2Q08357 652 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 ARHGAP29Q52LW3 1261 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 CDC37L1Q7L3B6 337 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 LRRN4CLQ8ND94 238 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 TSPYL1Q9H0U9 437 aa11.26□□□□□ -0.61
NHLRC3-203ENST00000470258 CAMSAP1Q5T5Y3 1602 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 CEBPZQ03701 1054 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 KRBA2Q6ZNG9 492 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 PRAM1Q96QH2 718 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 PDRG1Q9NUG6 133 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 RIMS2Q9UQ26 1411 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 TET3O43151 1660 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 CLCN6P51797 869 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 RRS1Q15050 365 aaKnown RBP11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 PTPRMP28827 1452 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 KIF1BO60333 1816 aa11.25□□□□□ -0.61
NHLRC3-203ENST00000470258 NR1I2O75469 434 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 SYT10Q6XYQ8 523 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 CHMP4CQ96CF2 233 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 TTC14Q96N46 770 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 HAP1P54257 671 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 SNW1Q13573 536 aaKnown RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 TDRD7Q8NHU6 1098 aaKnown RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 KIF1BPQ96EK5 621 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 TCEANC2Q96MN5 208 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 PNMA6AP0CW24 399 aaPredicted RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 HOMER1Q86YM7 354 aa11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 LRRFIP2Q9Y608 721 aaKnown RBP11.24□□□□□ -0.61
NHLRC3-203ENST00000470258 ABCC3O15438 1527 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 TMCO3Q6UWJ1 677 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 ZCCHC17Q9NP64 241 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 PNPLA6Q8IY17 1366 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 STK3Q13188 491 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 ADCK5Q3MIX3 580 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 NYAP1Q6ZVC0 841 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 CCAR2Q8N163 923 aaKnown RBP11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 RASSF4Q9H2L5 321 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 HYPKQ9NX55 129 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 ZRANB1Q9UGI0 708 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 PTPRCP08575 1304 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 SSH2Q76I76 1423 aa11.23□□□□□ -0.61
NHLRC3-203ENST00000470258 TRIM66O15016 1216 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 ST5P78524 1137 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 DDX19AQ9NUU7 478 aaKnown RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 FHOD1Q9Y613 1164 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 SGSM2O43147 1006 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 SEC31AO94979 1220 aaKnown RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 FOSBP53539 338 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 ME3Q16798 604 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CLSTN2Q9H4D0 955 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 ERBB3P21860 1342 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 PLA2G4AP47712 749 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 TPM4P67936 248 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 C11orf57Q6ZUT1 292 aaPredicted RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 UBXN4Q92575 508 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CCDC34Q96HJ3 373 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 PUS7Q96PZ0 661 aaKnown RBP11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 CDK19Q9BWU1 502 aa11.22□□□□□ -0.61
NHLRC3-203ENST00000470258 PREX1Q8TCU6 1659 aa11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 SURF6O75683 361 aaKnown RBP11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 IL13P35225 146 aa11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 SLFNL1Q499Z3 407 aa11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 MNS1Q8NEH6 495 aa11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 ARGLU1Q9NWB6 273 aaPredicted RBP11.21□□□□□ -0.61
NHLRC3-203ENST00000470258 SALL3Q9BXA9 1300 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 GYS2P54840 703 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 RNF20Q5VTR2 975 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 ERCC4Q92889 916 aaPredicted RBP11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 FAM53CQ9NYF3 392 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 ADGRB1O14514 1584 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 NRXN1Q9ULB1 1477 aa11.21□□□□□ -0.62
NHLRC3-203ENST00000470258 GNL2Q13823 731 aaKnown RBP11.2□□□□□ -0.62
NHLRC3-203ENST00000470258 SULT6B1Q6IMI4 303 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms