RNA–Protein interactions for RNA: ENST00000470117.2

USP30-205, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-205ENST00000470117 NBPF5PQ86XG9 351 aaPredicted RBP12.39□□□□□ -0.43
USP30-205ENST00000470117 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
USP30-205ENST00000470117 NBPF26B4DH59 902 aa12.38□□□□□ -0.43
USP30-205ENST00000470117 NFKBIEO00221 500 aa12.38□□□□□ -0.43
USP30-205ENST00000470117 C21orf2O43822 256 aa12.38□□□□□ -0.43
USP30-205ENST00000470117 NBPF10Q6P3W6 841 aaKnown RBP12.38□□□□□ -0.43
USP30-205ENST00000470117 NBPF15Q8N660 670 aa12.38□□□□□ -0.43
USP30-205ENST00000470117 THUMPD2Q9BTF0 503 aaKnown RBP12.38□□□□□ -0.43
USP30-205ENST00000470117 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
USP30-205ENST00000470117 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 APLP1P51693 650 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 CLEC4GQ6UXB4 293 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 RBM46Q8TBY0 533 aaKnown RBP12.37□□□□□ -0.43
USP30-205ENST00000470117 PLEKHF1Q96S99 279 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 RRAGCQ9HB90 399 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 NIP7Q9Y221 180 aaKnown RBP eCLIP12.37□□□□□ -0.43
USP30-205ENST00000470117 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
USP30-205ENST00000470117 CCDC88AQ3V6T2 1871 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 PRELPP51888 382 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 RALBP1Q15311 655 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
USP30-205ENST00000470117 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 CNKSR1Q969H4 720 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 FER1L6Q2WGJ9 1857 aa12.36□□□□□ -0.43
USP30-205ENST00000470117 WDR90Q96KV7 1748 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 SRGNP10124 158 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 KIF6Q6ZMV9 814 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 MASTLQ96GX5 879 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 TAOK3Q9H2K8 898 aa12.35□□□□□ -0.43
USP30-205ENST00000470117 SLX4Q8IY92 1834 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 RGL2O15211 777 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 MYL6BP14649 208 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 GTF2E1P29083 439 aaPredicted RBP12.34□□□□□ -0.43
USP30-205ENST00000470117 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
USP30-205ENST00000470117 SOGA3Q5TF21 947 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
USP30-205ENST00000470117 RRP7AQ9Y3A4 280 aaKnown RBP12.34□□□□□ -0.43
USP30-205ENST00000470117 GLTPD2A6NH11 291 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 NPR1P16066 1061 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 FSTL1Q12841 308 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 DDX10Q13206 875 aaKnown RBP12.33□□□□□ -0.44
USP30-205ENST00000470117 HLFQ16534 295 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 SMC1BQ8NDV3 1235 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 MYBBP1AQ9BQG0 1328 aaKnown RBP12.33□□□□□ -0.44
USP30-205ENST00000470117 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
USP30-205ENST00000470117 VEGFAP15692 232 aaPredicted RBP12.32□□□□□ -0.44
USP30-205ENST00000470117 RIPK4P57078 832 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 LMOD3Q0VAK6 560 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 CCDC93Q567U6 631 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 ZBTB3Q9H5J0 574 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
USP30-205ENST00000470117 MAP3K15Q6ZN16 1313 aa12.32□□□□□ -0.44
USP30-205ENST00000470117 ABCC12Q96J65 1359 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 GPTP24298 496 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 NYXQ9GZU5 481 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 NUP98P52948 1817 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 ERBB4Q15303 1308 aa12.31□□□□□ -0.44
USP30-205ENST00000470117 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
USP30-205ENST00000470117 TMPOP42166 694 aaKnown RBP12.3□□□□□ -0.44
USP30-205ENST00000470117 WDR43Q15061 677 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP30-205ENST00000470117 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
USP30-205ENST00000470117 CCDC146Q8IYE0 955 aa12.3□□□□□ -0.44
USP30-205ENST00000470117 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
USP30-205ENST00000470117 HTRA3P83110 453 aa12.29□□□□□ -0.44
USP30-205ENST00000470117 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
USP30-205ENST00000470117 IBTKQ9P2D0 1353 aaPredicted RBP12.29□□□□□ -0.44
USP30-205ENST00000470117 KLRG2A4D1S0 409 aaPredicted RBP12.28□□□□□ -0.44
USP30-205ENST00000470117 NCBP3Q53F19 620 aaKnown RBP12.28□□□□□ -0.44
USP30-205ENST00000470117 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
USP30-205ENST00000470117 UBN2Q6ZU65 1347 aa12.28□□□□□ -0.44
USP30-205ENST00000470117 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
USP30-205ENST00000470117 FKBP4Q02790 459 aaKnown RBP eCLIP12.27□□□□□ -0.45
USP30-205ENST00000470117 OLFM4Q6UX06 510 aa12.27□□□□□ -0.45
USP30-205ENST00000470117 RIC1Q4ADV7 1423 aa12.27□□□□□ -0.45
USP30-205ENST00000470117 CEP350Q5VT06 3117 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 DDNO94850 711 aaPredicted RBP12.26□□□□□ -0.45
USP30-205ENST00000470117 ANXA1P04083 346 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 CRY2Q49AN0 593 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 SUSD4Q5VX71 490 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 GIGYF2Q6Y7W6 1299 aaKnown RBP12.26□□□□□ -0.45
USP30-205ENST00000470117 RTKN2Q8IZC4 609 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 NECTIN2Q92692 538 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 RUNDC1Q96C34 613 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 ZNF277Q9NRM2 450 aaPredicted RBP12.26□□□□□ -0.45
USP30-205ENST00000470117 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
USP30-205ENST00000470117 LAS1LQ9Y4W2 734 aaKnown RBP12.26□□□□□ -0.45
USP30-205ENST00000470117 POTECB2RU33 542 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 NTSR2O95665 410 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 PARP10Q53GL7 1025 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 PPP1R42Q7Z4L9 355 aa12.25□□□□□ -0.45
USP30-205ENST00000470117 DNAJC5GQ8N7S2 189 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms