RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 TMEM88BA6NKF7 163 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
LSM2-210ENST00000470086 EIF4A2Q14240 407 aaKnown RBP11.55□□□□□ -0.56
LSM2-210ENST00000470086 ERFEQ4G0M1 354 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 DNAJC10Q8IXB1 793 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 TTLL6Q8N841 843 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 PUS7Q96PZ0 661 aaKnown RBP11.55□□□□□ -0.56
LSM2-210ENST00000470086 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
LSM2-210ENST00000470086 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.55□□□□□ -0.56
LSM2-210ENST00000470086 WDR33Q9C0J8 1336 aaKnown RBP11.55□□□□□ -0.56
LSM2-210ENST00000470086 PPM1GO15355 546 aaPredicted RBP11.54□□□□□ -0.56
LSM2-210ENST00000470086 SERPINB2P05120 415 aa11.54□□□□□ -0.56
LSM2-210ENST00000470086 SLC51AQ86UW1 340 aa11.54□□□□□ -0.56
LSM2-210ENST00000470086 ZBTB47Q9UFB7 747 aaPredicted RBP11.54□□□□□ -0.56
LSM2-210ENST00000470086 ZBTB1Q9Y2K1 713 aa11.54□□□□□ -0.56
LSM2-210ENST00000470086 WASHC2AQ641Q2 1341 aa11.54□□□□□ -0.56
LSM2-210ENST00000470086 ERVV-2B6SEH9 535 aa11.53□□□□□ -0.56
LSM2-210ENST00000470086 MAP1SQ66K74 1059 aaPredicted RBP11.53□□□□□ -0.56
LSM2-210ENST00000470086 OLFM4Q6UX06 510 aa11.53□□□□□ -0.56
LSM2-210ENST00000470086 LDHDQ86WU2 507 aa11.53□□□□□ -0.56
LSM2-210ENST00000470086 EAPPQ56P03 285 aaPredicted RBP11.52□□□□□ -0.57
LSM2-210ENST00000470086 AEBP1Q8IUX7 1158 aa11.52□□□□□ -0.57
LSM2-210ENST00000470086 L3MBTL3Q96JM7 780 aaPredicted RBP11.52□□□□□ -0.57
LSM2-210ENST00000470086 MCOLN1Q9GZU1 580 aa11.52□□□□□ -0.57
LSM2-210ENST00000470086 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
LSM2-210ENST00000470086 LTBP3Q9NS15 1303 aa11.52□□□□□ -0.57
LSM2-210ENST00000470086 AOC2O75106 756 aa11.51□□□□□ -0.57
LSM2-210ENST00000470086 CYP4F22Q6NT55 531 aa11.51□□□□□ -0.57
LSM2-210ENST00000470086 HTTP42858 3142 aa11.51□□□□□ -0.57
LSM2-210ENST00000470086 CYP19A1P11511 503 aaPredicted RBP11.5□□□□□ -0.57
LSM2-210ENST00000470086 DPY19L2Q6NUT2 758 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 ZNF530Q6P9A1 599 aaPredicted RBP11.5□□□□□ -0.57
LSM2-210ENST00000470086 BICDL1Q6ZP65 573 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 CFAP44Q96MT7 982 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 POLKQ9UBT6 870 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 CENPFP49454 3210 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
LSM2-210ENST00000470086 AKAP11Q9UKA4 1901 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 CABP4P57796 275 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 DEFB115Q30KQ5 88 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 TBC1D9BQ66K14 1250 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 PRR5LQ6MZQ0 368 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 NFATC2IPQ8NCF5 419 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 LAMB2P55268 1798 aa11.49□□□□□ -0.57
LSM2-210ENST00000470086 GRM1Q13255 1194 aa11.48□□□□□ -0.57
LSM2-210ENST00000470086 SLC39A6Q13433 755 aa11.48□□□□□ -0.57
LSM2-210ENST00000470086 ZNF622Q969S3 477 aaKnown RBP eCLIP11.48□□□□□ -0.57
LSM2-210ENST00000470086 POLR2AP24928 1970 aaKnown RBP11.47□□□□□ -0.57
LSM2-210ENST00000470086 H0YIN7 160 aa11.47□□□□□ -0.57
LSM2-210ENST00000470086 ZPR1O75312 459 aa11.47□□□□□ -0.57
LSM2-210ENST00000470086 SOX10P56693 466 aa11.47□□□□□ -0.57
LSM2-210ENST00000470086 PRPF40BQ6NWY9 871 aaKnown RBP11.47□□□□□ -0.57
LSM2-210ENST00000470086 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
LSM2-210ENST00000470086 CAPNS2Q96L46 248 aa11.47□□□□□ -0.57
LSM2-210ENST00000470086 TRAF5O00463 557 aa11.46□□□□□ -0.57
LSM2-210ENST00000470086 EPHX2P34913 555 aa11.46□□□□□ -0.57
LSM2-210ENST00000470086 CNTROBQ8N137 903 aa11.46□□□□□ -0.57
LSM2-210ENST00000470086 ABT1Q9ULW3 272 aaKnown RBP11.46□□□□□ -0.57
LSM2-210ENST00000470086 NUP98P52948 1817 aa11.46□□□□□ -0.58
LSM2-210ENST00000470086 LAMB4A4D0S4 1761 aa11.46□□□□□ -0.58
LSM2-210ENST00000470086 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
LSM2-210ENST00000470086 CST9Q5W186 159 aa11.45□□□□□ -0.58
LSM2-210ENST00000470086 C7orf43Q8WVR3 580 aa11.45□□□□□ -0.58
LSM2-210ENST00000470086 ZIC5Q96T25 663 aa11.45□□□□□ -0.58
LSM2-210ENST00000470086 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
LSM2-210ENST00000470086 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
LSM2-210ENST00000470086 KDM3BQ7LBC6 1761 aa11.45□□□□□ -0.58
LSM2-210ENST00000470086 TAF1P21675 1872 aa11.44□□□□□ -0.58
LSM2-210ENST00000470086 IQCA1LA6NCM1 817 aa11.44□□□□□ -0.58
LSM2-210ENST00000470086 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
LSM2-210ENST00000470086 NUBP1P53384 320 aa11.44□□□□□ -0.58
LSM2-210ENST00000470086 LGR6Q9HBX8 967 aa11.44□□□□□ -0.58
LSM2-210ENST00000470086 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
LSM2-210ENST00000470086 PAXIP1Q6ZW49 1069 aaPredicted RBP11.43□□□□□ -0.58
LSM2-210ENST00000470086 RBBP6Q7Z6E9 1792 aaKnown RBP11.42□□□□□ -0.58
LSM2-210ENST00000470086 PAPPA2Q9BXP8 1791 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 SRGNP10124 158 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 CANXP27824 592 aaKnown RBP11.42□□□□□ -0.58
LSM2-210ENST00000470086 MTHFSP49914 203 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 CLCN6P51797 869 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 DGKZQ13574 1117 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 RASEFQ8IZ41 740 aa11.42□□□□□ -0.58
LSM2-210ENST00000470086 GPR101Q96P66 508 aaPredicted RBP11.42□□□□□ -0.58
LSM2-210ENST00000470086 HSP90AB1P08238 724 aaKnown RBP11.41□□□□□ -0.58
LSM2-210ENST00000470086 SCNN1DP51172 638 aa11.41□□□□□ -0.58
LSM2-210ENST00000470086 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
LSM2-210ENST00000470086 BRIP1Q9BX63 1249 aa11.41□□□□□ -0.58
LSM2-210ENST00000470086 SLC52A2Q9HAB3 445 aa11.41□□□□□ -0.58
LSM2-210ENST00000470086 TLL2Q9Y6L7 1015 aa11.41□□□□□ -0.58
LSM2-210ENST00000470086 GABBR2O75899 941 aa11.4□□□□□ -0.58
LSM2-210ENST00000470086 PLEKHO1Q53GL0 409 aaPredicted RBP11.4□□□□□ -0.58
LSM2-210ENST00000470086 FZD9O00144 591 aa11.39□□□□□ -0.59
LSM2-210ENST00000470086 EPS15P42566 896 aa11.39□□□□□ -0.59
LSM2-210ENST00000470086 FKBP4Q02790 459 aaKnown RBP eCLIP11.39□□□□□ -0.59
LSM2-210ENST00000470086 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
LSM2-210ENST00000470086 IFNLR1Q8IU57 520 aaPredicted RBP11.39□□□□□ -0.59
LSM2-210ENST00000470086 TBC1D2BQ9UPU7 963 aa11.39□□□□□ -0.59
LSM2-210ENST00000470086 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms