RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 STARD3NLO95772 234 aa16.47■□□□□ 0.23
LSM2-209ENST00000470083 CCDC93Q567U6 631 aa16.47■□□□□ 0.23
LSM2-209ENST00000470083 C7orf43Q8WVR3 580 aa16.47■□□□□ 0.23
LSM2-209ENST00000470083 CAPNS2Q96L46 248 aa16.47■□□□□ 0.23
LSM2-209ENST00000470083 RNMTO43148 476 aaKnown RBP16.46■□□□□ 0.23
LSM2-209ENST00000470083 ECE1P42892 770 aa16.46■□□□□ 0.23
LSM2-209ENST00000470083 DDX21Q9NR30 783 aaKnown RBP eCLIP16.46■□□□□ 0.23
LSM2-209ENST00000470083 SCN11AQ9UI33 1791 aa16.46■□□□□ 0.22
LSM2-209ENST00000470083 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
LSM2-209ENST00000470083 THSD7BQ9C0I4 1608 aa16.45■□□□□ 0.22
LSM2-209ENST00000470083 NPHP1O15259 732 aa16.45■□□□□ 0.22
LSM2-209ENST00000470083 ST5P78524 1137 aa16.45■□□□□ 0.22
LSM2-209ENST00000470083 FKBP4Q02790 459 aaKnown RBP eCLIP16.45■□□□□ 0.22
LSM2-209ENST00000470083 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
LSM2-209ENST00000470083 SETDB2Q96T68 719 aa16.44■□□□□ 0.22
LSM2-209ENST00000470083 ZNF277Q9NRM2 450 aaPredicted RBP16.44■□□□□ 0.22
LSM2-209ENST00000470083 SLX4Q8IY92 1834 aa16.44■□□□□ 0.22
LSM2-209ENST00000470083 FZD9O00144 591 aa16.43■□□□□ 0.22
LSM2-209ENST00000470083 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
LSM2-209ENST00000470083 TBC1D2BQ9UPU7 963 aa16.43■□□□□ 0.22
LSM2-209ENST00000470083 TNRC18O15417 2968 aaPredicted RBP16.43■□□□□ 0.22
LSM2-209ENST00000470083 IL13P35225 146 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 CYP4F22Q6NT55 531 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 PAXIP1Q6ZW49 1069 aaPredicted RBP16.42■□□□□ 0.22
LSM2-209ENST00000470083 GPC2Q8N158 579 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 MCOLN1Q9GZU1 580 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 SCN7AQ01118 1682 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 PDE4DIPQ5VU43 2346 aa16.42■□□□□ 0.22
LSM2-209ENST00000470083 CA12O43570 354 aa16.41■□□□□ 0.22
LSM2-209ENST00000470083 IL6STP40189 918 aaPredicted RBP16.41■□□□□ 0.22
LSM2-209ENST00000470083 RTKN2Q8IZC4 609 aa16.41■□□□□ 0.22
LSM2-209ENST00000470083 TSKSQ9UJT2 592 aa16.41■□□□□ 0.22
LSM2-209ENST00000470083 ZNF330Q9Y3S2 320 aaPredicted RBP16.41■□□□□ 0.22
LSM2-209ENST00000470083 CAMTA2O94983 1202 aa16.4■□□□□ 0.22
LSM2-209ENST00000470083 NPR1P16066 1061 aa16.4■□□□□ 0.22
LSM2-209ENST00000470083 MAP2K2P36507 400 aa16.4■□□□□ 0.22
LSM2-209ENST00000470083 GRM1Q13255 1194 aa16.4■□□□□ 0.22
LSM2-209ENST00000470083 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
LSM2-209ENST00000470083 IARSP41252 1262 aaKnown RBP16.39■□□□□ 0.21
LSM2-209ENST00000470083 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
LSM2-209ENST00000470083 ARFGEF2Q9Y6D5 1785 aa16.38■□□□□ 0.21
LSM2-209ENST00000470083 KLRG2A4D1S0 409 aaPredicted RBP16.38■□□□□ 0.21
LSM2-209ENST00000470083 FMR1Q06787 632 aaKnown RBP eCLIP16.38■□□□□ 0.21
LSM2-209ENST00000470083 CST9Q5W186 159 aa16.38■□□□□ 0.21
LSM2-209ENST00000470083 ZNF496Q96IT1 587 aaPredicted RBP16.38■□□□□ 0.21
LSM2-209ENST00000470083 TLL2Q9Y6L7 1015 aa16.38■□□□□ 0.21
LSM2-209ENST00000470083 HEG1Q9ULI3 1381 aa16.38■□□□□ 0.21
LSM2-209ENST00000470083 LTBP1Q14766 1721 aa16.37■□□□□ 0.21
LSM2-209ENST00000470083 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
LSM2-209ENST00000470083 NPM2Q86SE8 214 aaKnown RBP16.37■□□□□ 0.21
LSM2-209ENST00000470083 NBPF5PQ86XG9 351 aaPredicted RBP16.37■□□□□ 0.21
LSM2-209ENST00000470083 UBR2Q8IWV8 1755 aa16.36■□□□□ 0.21
LSM2-209ENST00000470083 AOC2O75106 756 aa16.36■□□□□ 0.21
LSM2-209ENST00000470083 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
LSM2-209ENST00000470083 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
LSM2-209ENST00000470083 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
LSM2-209ENST00000470083 JDP2Q8WYK2 163 aa16.36■□□□□ 0.21
LSM2-209ENST00000470083 TRAF5O00463 557 aa16.35■□□□□ 0.21
LSM2-209ENST00000470083 DGKZQ13574 1117 aa16.35■□□□□ 0.21
LSM2-209ENST00000470083 MTHFSDQ2M296 383 aaKnown RBP16.35■□□□□ 0.21
LSM2-209ENST00000470083 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
LSM2-209ENST00000470083 A1BGP04217 495 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 SCNN1DP51172 638 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
LSM2-209ENST00000470083 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
LSM2-209ENST00000470083 ZNF790Q6PG37 636 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 DZIP3Q86Y13 1208 aaKnown RBP16.34■□□□□ 0.21
LSM2-209ENST00000470083 PSMD1Q99460 953 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
LSM2-209ENST00000470083 EPS15P42566 896 aa16.33■□□□□ 0.2
LSM2-209ENST00000470083 USP50Q70EL3 339 aaPredicted RBP16.33■□□□□ 0.2
LSM2-209ENST00000470083 SAPCD2Q86UD0 394 aa16.33■□□□□ 0.2
LSM2-209ENST00000470083 HHIPL1Q96JK4 782 aa16.33■□□□□ 0.2
LSM2-209ENST00000470083 PANK3Q9H999 370 aa16.33■□□□□ 0.2
LSM2-209ENST00000470083 SNED1Q8TER0 1413 aa16.33■□□□□ 0.2
LSM2-209ENST00000470083 HMOX1P09601 288 aa16.32■□□□□ 0.2
LSM2-209ENST00000470083 CACNA1SQ13698 1873 aa16.32■□□□□ 0.2
LSM2-209ENST00000470083 ALDH1B1P30837 517 aa16.31■□□□□ 0.2
LSM2-209ENST00000470083 TPTE2Q6XPS3 522 aa16.31■□□□□ 0.2
LSM2-209ENST00000470083 FMNL2Q96PY5 1086 aa16.31■□□□□ 0.2
LSM2-209ENST00000470083 ZNF652Q9Y2D9 606 aa16.31■□□□□ 0.2
LSM2-209ENST00000470083 TEFQ10587 303 aa16.3■□□□□ 0.2
LSM2-209ENST00000470083 PRPF38BQ5VTL8 546 aaKnown RBP16.3■□□□□ 0.2
LSM2-209ENST00000470083 CELF2O95319 508 aaKnown RBP16.29■□□□□ 0.2
LSM2-209ENST00000470083 CC2D2BQ6DHV5 1058 aa16.29■□□□□ 0.2
LSM2-209ENST00000470083 COL4A5P29400 1685 aa16.29■□□□□ 0.2
LSM2-209ENST00000470083 RGL2O15211 777 aa16.28■□□□□ 0.2
LSM2-209ENST00000470083 CIAPIN1Q6FI81 312 aa16.28■□□□□ 0.2
LSM2-209ENST00000470083 BCORQ6W2J9 1755 aa16.28■□□□□ 0.2
LSM2-209ENST00000470083 LARGE2Q8N3Y3 721 aa16.27■□□□□ 0.2
LSM2-209ENST00000470083 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
LSM2-209ENST00000470083 ADARB2Q9NS39 739 aaKnown RBP16.27■□□□□ 0.2
LSM2-209ENST00000470083 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
LSM2-209ENST00000470083 SOX10P56693 466 aa16.26■□□□□ 0.19
LSM2-209ENST00000470083 NOGQ13253 232 aa16.26■□□□□ 0.19
LSM2-209ENST00000470083 CRY2Q49AN0 593 aa16.26■□□□□ 0.19
LSM2-209ENST00000470083 GRIPAP1Q4V328 841 aa16.26■□□□□ 0.19
LSM2-209ENST00000470083 CASP8AP2Q9UKL3 1982 aa16.26■□□□□ 0.19
LSM2-209ENST00000470083 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 291 ms