RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 ZBTB3Q9H5J0 574 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
SHROOM3-203ENST00000469923 NFKBIEO00221 500 aa12.17□□□□□ -0.46
SHROOM3-203ENST00000469923 APAF1O14727 1248 aa12.17□□□□□ -0.46
SHROOM3-203ENST00000469923 C21orf2O43822 256 aa12.17□□□□□ -0.46
SHROOM3-203ENST00000469923 NIP7Q9Y221 180 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHROOM3-203ENST00000469923 MAPK8IP3Q9UPT6 1336 aa12.16□□□□□ -0.46
SHROOM3-203ENST00000469923 RUNDC1Q96C34 613 aa12.16□□□□□ -0.46
SHROOM3-203ENST00000469923 BRIP1Q9BX63 1249 aa12.16□□□□□ -0.46
SHROOM3-203ENST00000469923 H0YIN7 160 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 CHL1O00533 1208 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 SUSD4Q5VX71 490 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
SHROOM3-203ENST00000469923 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 SRGNP10124 158 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 HTRA3P83110 453 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 C7orf43Q8WVR3 580 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 RRAGCQ9HB90 399 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 ANKRD31Q8N7Z5 1873 aa12.14□□□□□ -0.47
SHROOM3-203ENST00000469923 BRCA1P38398 1863 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-203ENST00000469923 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
SHROOM3-203ENST00000469923 WDR43Q15061 677 aaKnown RBP eCLIP12.13□□□□□ -0.47
SHROOM3-203ENST00000469923 CNBD1Q8NA66 436 aa12.13□□□□□ -0.47
SHROOM3-203ENST00000469923 XAGE3Q8WTP9 111 aa12.13□□□□□ -0.47
SHROOM3-203ENST00000469923 NRXN2Q9P2S2 1712 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 ZNF316A6NFI3 1004 aaPredicted RBP12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 POTECB2RU33 542 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 NEFMP07197 916 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 ZNF34Q8IZ26 560 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 PNISRQ8TF01 805 aaKnown RBP12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 MBIPQ9NS73 344 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 ABCC12Q96J65 1359 aa12.12□□□□□ -0.47
SHROOM3-203ENST00000469923 MAP3K15Q6ZN16 1313 aa12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 SLX4Q8IY92 1834 aa12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 CLEC4GQ6UXB4 293 aa12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 C8orf58Q8NAV2 365 aa12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 JARID2Q92833 1246 aaPredicted RBP12.11□□□□□ -0.47
SHROOM3-203ENST00000469923 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 PDE6BP35913 854 aa12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 PRPF40BQ6NWY9 871 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 TSPYL6Q8N831 410 aa12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 PNNQ9H307 717 aaKnown RBP12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 CHPF2Q9P2E5 772 aa12.1□□□□□ -0.47
SHROOM3-203ENST00000469923 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
SHROOM3-203ENST00000469923 NPM2Q86SE8 214 aaKnown RBP12.09□□□□□ -0.47
SHROOM3-203ENST00000469923 KDM3BQ7LBC6 1761 aa12.09□□□□□ -0.47
SHROOM3-203ENST00000469923 ERVV-1B6SEH8 477 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 NPHP1O15259 732 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 DUSP27Q5VZP5 1158 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 STYK1Q6J9G0 422 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 TPTE2Q6XPS3 522 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 MASTLQ96GX5 879 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 PHAXQ9H814 394 aaKnown RBP12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 ZNF277Q9NRM2 450 aaPredicted RBP12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 COL11A2P13942 1736 aaPredicted RBP12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 SBF1O95248 1867 aa12.08□□□□□ -0.48
SHROOM3-203ENST00000469923 ATP5J2-PTCD1G3V325 749 aa12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 NTSR2O95665 410 aa12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 ST5P78524 1137 aa12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 RTL5Q5HYW3 569 aaPredicted RBP12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 SPINK5Q9NQ38 1064 aaPredicted RBP12.07□□□□□ -0.48
SHROOM3-203ENST00000469923 SCN7AQ01118 1682 aa12.06□□□□□ -0.48
SHROOM3-203ENST00000469923 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
SHROOM3-203ENST00000469923 LMNB1P20700 586 aa12.06□□□□□ -0.48
SHROOM3-203ENST00000469923 CFAP44Q96MT7 982 aa12.06□□□□□ -0.48
SHROOM3-203ENST00000469923 PCNTO95613 3336 aa12.06□□□□□ -0.48
SHROOM3-203ENST00000469923 ARFGEF1Q9Y6D6 1849 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 NPR1P16066 1061 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 GTF2E1P29083 439 aaPredicted RBP12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 G2E3Q7L622 706 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 NLRP10Q86W26 655 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 CNKSR1Q969H4 720 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 DDX21Q9NR30 783 aaKnown RBP eCLIP12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 ZNF652Q9Y2D9 606 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 BCORQ6W2J9 1755 aa12.05□□□□□ -0.48
SHROOM3-203ENST00000469923 TNRC6CQ9HCJ0 1690 aaKnown RBP12.04□□□□□ -0.48
SHROOM3-203ENST00000469923 TCIRG1Q13488 830 aa12.04□□□□□ -0.48
SHROOM3-203ENST00000469923 HDGFL1Q5TGJ6 251 aa12.04□□□□□ -0.48
SHROOM3-203ENST00000469923 BABAM1Q9NWV8 329 aa12.04□□□□□ -0.48
SHROOM3-203ENST00000469923 NUP98P52948 1817 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 GLTPD2A6NH11 291 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
SHROOM3-203ENST00000469923 CRY2Q49AN0 593 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms